RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 HYPKQ9NX55 129 aa20.59■□□□□ 0.89
PDLIM7-210ENST00000503827 ANGEL1Q9UNK9 670 aaKnown RBP20.59■□□□□ 0.89
PDLIM7-210ENST00000503827 TMPOP42166 694 aaKnown RBP20.58■□□□□ 0.89
PDLIM7-210ENST00000503827 MMP14P50281 582 aa20.58■□□□□ 0.89
PDLIM7-210ENST00000503827 DACT2Q5SW24 774 aa20.58■□□□□ 0.89
PDLIM7-210ENST00000503827 FBXW7Q969H0 707 aa20.58■□□□□ 0.89
PDLIM7-210ENST00000503827 PTPN22Q9Y2R2 807 aa20.58■□□□□ 0.89
PDLIM7-210ENST00000503827 CHL1O00533 1208 aa20.57■□□□□ 0.88
PDLIM7-210ENST00000503827 PDE8AO60658 829 aa20.57■□□□□ 0.88
PDLIM7-210ENST00000503827 HOXB7P09629 217 aa20.57■□□□□ 0.88
PDLIM7-210ENST00000503827 EN2P19622 333 aaPredicted RBP20.57■□□□□ 0.88
PDLIM7-210ENST00000503827 RIC3Q7Z5B4 369 aa20.57■□□□□ 0.88
PDLIM7-210ENST00000503827 SLC10A4Q96EP9 437 aa20.57■□□□□ 0.88
PDLIM7-210ENST00000503827 LAS1LQ9Y4W2 734 aaKnown RBP20.57■□□□□ 0.88
PDLIM7-210ENST00000503827 SPEF2Q9C093 1822 aa20.56■□□□□ 0.88
PDLIM7-210ENST00000503827 SASH1O94885 1247 aa20.56■□□□□ 0.88
PDLIM7-210ENST00000503827 ARMC5Q96C12 935 aa20.56■□□□□ 0.88
PDLIM7-210ENST00000503827 CCDC85AQ96PX6 553 aaPredicted RBP20.56■□□□□ 0.88
PDLIM7-210ENST00000503827 MXD3Q9BW11 206 aa20.56■□□□□ 0.88
PDLIM7-210ENST00000503827 MED23Q9ULK4 1368 aa20.56■□□□□ 0.88
PDLIM7-210ENST00000503827 MKI67P46013 3256 aaKnown RBP20.55■□□□□ 0.88
PDLIM7-210ENST00000503827 ZBTB48P10074 688 aaPredicted RBP20.55■□□□□ 0.88
PDLIM7-210ENST00000503827 STRIP1Q5VSL9 837 aa20.55■□□□□ 0.88
PDLIM7-210ENST00000503827 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.55■□□□□ 0.88
PDLIM7-210ENST00000503827 COLQQ9Y215 455 aaPredicted RBP20.55■□□□□ 0.88
PDLIM7-210ENST00000503827 PCCAP05165 728 aaPredicted RBP20.54■□□□□ 0.88
PDLIM7-210ENST00000503827 GOLGA2Q08379 1002 aa20.54■□□□□ 0.88
PDLIM7-210ENST00000503827 OTUD7BQ6GQQ9 843 aa20.54■□□□□ 0.88
PDLIM7-210ENST00000503827 CD99L2Q8TCZ2 262 aa20.54■□□□□ 0.88
PDLIM7-210ENST00000503827 TMEM106CQ9BVX2 250 aa20.54■□□□□ 0.88
PDLIM7-210ENST00000503827 EFCC1Q9HA90 598 aa20.54■□□□□ 0.88
PDLIM7-210ENST00000503827 COL1A1P02452 1464 aaPredicted RBP20.54■□□□□ 0.88
PDLIM7-210ENST00000503827 IGF2BP3O00425 579 aaKnown RBP eCLIP20.53■□□□□ 0.88
PDLIM7-210ENST00000503827 CCDC191Q8NCU4 936 aa20.53■□□□□ 0.88
PDLIM7-210ENST00000503827 CDC5LQ99459 802 aaKnown RBP20.53■□□□□ 0.88
PDLIM7-210ENST00000503827 WNK4Q96J92 1243 aa20.52■□□□□ 0.88
PDLIM7-210ENST00000503827 MYD88Q99836 296 aa20.52■□□□□ 0.88
PDLIM7-210ENST00000503827 COA1Q9GZY4 146 aa20.52■□□□□ 0.88
PDLIM7-210ENST00000503827 FZD1Q9UP38 647 aa20.52■□□□□ 0.88
PDLIM7-210ENST00000503827 MYH3P11055 1940 aa20.52■□□□□ 0.88
PDLIM7-210ENST00000503827 ECM29Q5VYK3 1845 aa20.52■□□□□ 0.88
PDLIM7-210ENST00000503827 HTTP42858 3142 aa20.52■□□□□ 0.88
PDLIM7-210ENST00000503827 WTIPA6NIX2 430 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-210ENST00000503827 PPP1R12BO60237 982 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-210ENST00000503827 NEUROD2Q15784 382 aa20.51■□□□□ 0.87
PDLIM7-210ENST00000503827 MAP3K11Q16584 847 aa20.51■□□□□ 0.87
PDLIM7-210ENST00000503827 UNCXA6NJT0 531 aa20.5■□□□□ 0.87
PDLIM7-210ENST00000503827 CCT4P50991 539 aaKnown RBP20.5■□□□□ 0.87
PDLIM7-210ENST00000503827 SP3Q02447 781 aa20.5■□□□□ 0.87
PDLIM7-210ENST00000503827 CRHR2Q13324 411 aa20.5■□□□□ 0.87
PDLIM7-210ENST00000503827 TTLL5Q6EMB2 1281 aa20.5■□□□□ 0.87
PDLIM7-210ENST00000503827 KIAA0825Q8IV33 1275 aa20.5■□□□□ 0.87
PDLIM7-210ENST00000503827 JARID2Q92833 1246 aaPredicted RBP20.5■□□□□ 0.87
PDLIM7-210ENST00000503827 DEFB129Q9H1M3 183 aa20.5■□□□□ 0.87
PDLIM7-210ENST00000503827 CWC25Q9NXE8 425 aaPredicted RBP20.5■□□□□ 0.87
PDLIM7-210ENST00000503827 MINPP1Q9UNW1 487 aa20.5■□□□□ 0.87
PDLIM7-210ENST00000503827 CLMNQ96JQ2 1002 aa20.49■□□□□ 0.87
PDLIM7-210ENST00000503827 BSDC1Q9NW68 430 aaPredicted RBP20.49■□□□□ 0.87
PDLIM7-210ENST00000503827 DUSP27Q5VZP5 1158 aa20.48■□□□□ 0.87
PDLIM7-210ENST00000503827 NBPF11Q86T75 865 aa20.48■□□□□ 0.87
PDLIM7-210ENST00000503827 ZBED3Q96IU2 234 aaPredicted RBP20.48■□□□□ 0.87
PDLIM7-210ENST00000503827 PPP2R3BQ9Y5P8 575 aa20.48■□□□□ 0.87
PDLIM7-210ENST00000503827 CENPFP49454 3210 aa20.48■□□□□ 0.87
PDLIM7-210ENST00000503827 ARHGEF6Q15052 776 aa20.47■□□□□ 0.87
PDLIM7-210ENST00000503827 ZNF333Q96JL9 665 aa20.47■□□□□ 0.87
PDLIM7-210ENST00000503827 PHAXQ9H814 394 aaKnown RBP20.47■□□□□ 0.87
PDLIM7-210ENST00000503827 CTSWP56202 376 aa20.46■□□□□ 0.87
PDLIM7-210ENST00000503827 DLGAP5Q15398 846 aa20.46■□□□□ 0.87
PDLIM7-210ENST00000503827 SLC4A8Q2Y0W8 1093 aa20.46■□□□□ 0.87
PDLIM7-210ENST00000503827 SUPT20HL1Q3ZLR7 823 aa20.46■□□□□ 0.87
PDLIM7-210ENST00000503827 LEMD3Q9Y2U8 911 aa20.46■□□□□ 0.87
PDLIM7-210ENST00000503827 GTF2IP78347 998 aa20.45■□□□□ 0.86
PDLIM7-210ENST00000503827 SLC9C1Q4G0N8 1177 aa20.45■□□□□ 0.86
PDLIM7-210ENST00000503827 TXNRD3Q86VQ6 643 aa20.45■□□□□ 0.86
PDLIM7-210ENST00000503827 SSC5DA1L4H1 1573 aa20.45■□□□□ 0.86
PDLIM7-210ENST00000503827 IREB2P48200 963 aaKnown RBP20.44■□□□□ 0.86
PDLIM7-210ENST00000503827 TRIM35Q9UPQ4 493 aa20.44■□□□□ 0.86
PDLIM7-210ENST00000503827 TESPA1A2RU30 521 aaPredicted RBP20.43■□□□□ 0.86
PDLIM7-210ENST00000503827 H0YGN5 161 aa20.43■□□□□ 0.86
PDLIM7-210ENST00000503827 MYO1BO43795 1136 aa20.43■□□□□ 0.86
PDLIM7-210ENST00000503827 CCDC146Q8IYE0 955 aa20.43■□□□□ 0.86
PDLIM7-210ENST00000503827 ANKRD13AQ8IZ07 590 aa20.43■□□□□ 0.86
PDLIM7-210ENST00000503827 TTLL11Q8NHH1 800 aa20.43■□□□□ 0.86
PDLIM7-210ENST00000503827 OTUD5Q96G74 571 aa20.43■□□□□ 0.86
PDLIM7-210ENST00000503827 METTL22Q9BUU2 404 aaPredicted RBP20.43■□□□□ 0.86
PDLIM7-210ENST00000503827 GREM2Q9H772 168 aa20.43■□□□□ 0.86
PDLIM7-210ENST00000503827 DDX58O95786 925 aaKnown RBP20.42■□□□□ 0.86
PDLIM7-210ENST00000503827 GJA5P36382 358 aa20.42■□□□□ 0.86
PDLIM7-210ENST00000503827 CAP1Q01518 475 aa20.42■□□□□ 0.86
PDLIM7-210ENST00000503827 MTMR14Q8NCE2 650 aa20.42■□□□□ 0.86
PDLIM7-210ENST00000503827 PTPN18Q99952 460 aa20.42■□□□□ 0.86
PDLIM7-210ENST00000503827 PTCH2Q9Y6C5 1203 aa20.42■□□□□ 0.86
PDLIM7-210ENST00000503827 ZNF804BA4D1E1 1349 aa20.42■□□□□ 0.86
PDLIM7-210ENST00000503827 TRIOBPQ9H2D6 2365 aa20.42■□□□□ 0.86
PDLIM7-210ENST00000503827 IGHMBP2P38935 993 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-210ENST00000503827 ANKRD2Q9GZV1 360 aa20.41■□□□□ 0.86
PDLIM7-210ENST00000503827 BRCA2P51587 3418 aa20.41■□□□□ 0.86
PDLIM7-210ENST00000503827 OTOFQ9HC10 1997 aa20.41■□□□□ 0.86
PDLIM7-210ENST00000503827 CEP290O15078 2479 aa20.4■□□□□ 0.86
PDLIM7-210ENST00000503827 USP2O75604 605 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms