RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 PDE8BO95263 885 aa26.72■■□□□ 1.87
PCDH1-204ENST00000503492 HCLS1P14317 486 aaPredicted RBP26.72■■□□□ 1.87
PCDH1-204ENST00000503492 MCAMP43121 646 aa26.72■■□□□ 1.87
PCDH1-204ENST00000503492 ZFYP08048 801 aaPredicted RBP26.72■■□□□ 1.87
PCDH1-204ENST00000503492 AK7Q96M32 723 aa26.72■■□□□ 1.87
PCDH1-204ENST00000503492 ATP6V1DQ9Y5K8 247 aa26.72■■□□□ 1.87
PCDH1-204ENST00000503492 AKAP11Q9UKA4 1901 aa26.72■■□□□ 1.87
PCDH1-204ENST00000503492 LRP5O75197 1615 aa26.71■■□□□ 1.87
PCDH1-204ENST00000503492 FAM177BA6PVY3 158 aa26.71■■□□□ 1.87
PCDH1-204ENST00000503492 LARP1BQ659C4 914 aaKnown RBP26.71■■□□□ 1.87
PCDH1-204ENST00000503492 VPS37CA5D8V6 355 aaPredicted RBP26.71■■□□□ 1.87
PCDH1-204ENST00000503492 WASHC4Q2M389 1173 aa26.71■■□□□ 1.87
PCDH1-204ENST00000503492 LRRC2Q9BYS8 371 aa26.71■■□□□ 1.87
PCDH1-204ENST00000503492 HMGB1P09429 215 aaKnown RBP26.7■■□□□ 1.87
PCDH1-204ENST00000503492 ZNF512BQ96KM6 892 aaPredicted RBP26.7■■□□□ 1.87
PCDH1-204ENST00000503492 UTP14AQ9BVJ6 771 aaKnown RBP26.7■■□□□ 1.87
PCDH1-204ENST00000503492 DHX32Q7L7V1 743 aaKnown RBP26.7■■□□□ 1.86
PCDH1-204ENST00000503492 GTF3C6Q969F1 213 aa26.7■■□□□ 1.86
PCDH1-204ENST00000503492 E7EWF7 191 aa26.69■■□□□ 1.86
PCDH1-204ENST00000503492 FOXP2O15409 715 aa26.69■■□□□ 1.86
PCDH1-204ENST00000503492 SYCE3A1L190 88 aa26.69■■□□□ 1.86
PCDH1-204ENST00000503492 TTLL5Q6EMB2 1281 aa26.69■■□□□ 1.86
PCDH1-204ENST00000503492 APPBP2Q92624 585 aa26.69■■□□□ 1.86
PCDH1-204ENST00000503492 BRF1Q92994 677 aa26.69■■□□□ 1.86
PCDH1-204ENST00000503492 FAM98CQ17RN3 349 aaKnown RBP26.68■■□□□ 1.86
PCDH1-204ENST00000503492 SMARCC1Q92922 1105 aaPredicted RBP26.68■■□□□ 1.86
PCDH1-204ENST00000503492 MYH7P12883 1935 aa26.68■■□□□ 1.86
PCDH1-204ENST00000503492 NASPP49321 788 aaPredicted RBP26.68■■□□□ 1.86
PCDH1-204ENST00000503492 EXOSC10Q01780 885 aaKnown RBP26.68■■□□□ 1.86
PCDH1-204ENST00000503492 PARP10Q53GL7 1025 aa26.68■■□□□ 1.86
PCDH1-204ENST00000503492 PUS7LQ9H0K6 701 aaKnown RBP26.68■■□□□ 1.86
PCDH1-204ENST00000503492 HSP90B1P14625 803 aaKnown RBP26.67■■□□□ 1.86
PCDH1-204ENST00000503492 PDCP20941 246 aa26.67■■□□□ 1.86
PCDH1-204ENST00000503492 DNM1Q05193 864 aaKnown RBP26.67■■□□□ 1.86
PCDH1-204ENST00000503492 LRSAM1Q6UWE0 723 aa26.67■■□□□ 1.86
PCDH1-204ENST00000503492 HELBQ8NG08 1087 aaPredicted RBP26.67■■□□□ 1.86
PCDH1-204ENST00000503492 PDIA4P13667 645 aaKnown RBP26.66■■□□□ 1.86
PCDH1-204ENST00000503492 FGFR2P21802 821 aa26.66■■□□□ 1.86
PCDH1-204ENST00000503492 CDC37L1Q7L3B6 337 aa26.66■■□□□ 1.86
PCDH1-204ENST00000503492 RBSNQ9H1K0 784 aa26.66■■□□□ 1.86
PCDH1-204ENST00000503492 MROH5Q6ZUA9 1318 aa26.66■■□□□ 1.86
PCDH1-204ENST00000503492 PHKA1P46020 1223 aa26.66■■□□□ 1.86
PCDH1-204ENST00000503492 CCDC102BQ68D86 513 aa26.66■■□□□ 1.86
PCDH1-204ENST00000503492 NIP7Q9Y221 180 aaKnown RBP eCLIP26.66■■□□□ 1.86
PCDH1-204ENST00000503492 FIBPO43427 364 aa26.65■■□□□ 1.86
PCDH1-204ENST00000503492 SEC31BQ9NQW1 1179 aa26.65■■□□□ 1.86
PCDH1-204ENST00000503492 DDX60Q8IY21 1712 aaKnown RBP26.65■■□□□ 1.86
PCDH1-204ENST00000503492 NTSR2O95665 410 aa26.65■■□□□ 1.86
PCDH1-204ENST00000503492 COL5A3P25940 1745 aaPredicted RBP26.65■■□□□ 1.86
PCDH1-204ENST00000503492 PUM3Q15397 648 aaKnown RBP26.65■■□□□ 1.86
PCDH1-204ENST00000503492 AGXT2Q9BYV1 514 aa26.65■■□□□ 1.86
PCDH1-204ENST00000503492 JAK2O60674 1132 aa26.64■■□□□ 1.86
PCDH1-204ENST00000503492 FGD1P98174 961 aa26.64■■□□□ 1.86
PCDH1-204ENST00000503492 LPIN2Q92539 896 aa26.64■■□□□ 1.86
PCDH1-204ENST00000503492 ARID4AP29374 1257 aaPredicted RBP26.64■■□□□ 1.85
PCDH1-204ENST00000503492 FAM43AQ8N2R8 423 aa26.64■■□□□ 1.85
PCDH1-204ENST00000503492 SCRN1Q12765 414 aa26.63■■□□□ 1.85
PCDH1-204ENST00000503492 SYAP1Q96A49 352 aaPredicted RBP26.63■■□□□ 1.85
PCDH1-204ENST00000503492 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.63■■□□□ 1.85
PCDH1-204ENST00000503492 PIH1D3Q9NQM4 214 aaKnown RBP26.63■■□□□ 1.85
PCDH1-204ENST00000503492 ADD2P35612 726 aa26.63■■□□□ 1.85
PCDH1-204ENST00000503492 UBE2HP62256 183 aa26.63■■□□□ 1.85
PCDH1-204ENST00000503492 C8orf37Q96NL8 207 aa26.63■■□□□ 1.85
PCDH1-204ENST00000503492 CTNNA3Q9UI47 895 aa26.63■■□□□ 1.85
PCDH1-204ENST00000503492 BCL9LQ86UU0 1499 aa26.63■■□□□ 1.85
PCDH1-204ENST00000503492 GPAA1O43292 621 aa26.62■■□□□ 1.85
PCDH1-204ENST00000503492 FGAP02671 866 aa26.62■■□□□ 1.85
PCDH1-204ENST00000503492 FERMT3Q86UX7 667 aa26.62■■□□□ 1.85
PCDH1-204ENST00000503492 ARAP2Q8WZ64 1704 aa26.62■■□□□ 1.85
PCDH1-204ENST00000503492 PFKFB2O60825 505 aa26.62■■□□□ 1.85
PCDH1-204ENST00000503492 APOBRQ0VD83 1088 aa26.62■■□□□ 1.85
PCDH1-204ENST00000503492 TTF1Q15361 905 aaPredicted RBP26.62■■□□□ 1.85
PCDH1-204ENST00000503492 VPS72Q15906 364 aa26.62■■□□□ 1.85
PCDH1-204ENST00000503492 NGLY1Q96IV0 654 aa26.62■■□□□ 1.85
PCDH1-204ENST00000503492 MYO5AQ9Y4I1 1855 aaKnown RBP26.62■■□□□ 1.85
PCDH1-204ENST00000503492 UQCRFS1P1P0C7P4 283 aa26.61■■□□□ 1.85
PCDH1-204ENST00000503492 LINC00116Q8NCU8 138 aa26.61■■□□□ 1.85
PCDH1-204ENST00000503492 MPHOSPH8Q99549 860 aa26.61■■□□□ 1.85
PCDH1-204ENST00000503492 SNAP23O00161 211 aa26.61■■□□□ 1.85
PCDH1-204ENST00000503492 CCDC152Q4G0S7 254 aa26.61■■□□□ 1.85
PCDH1-204ENST00000503492 ZSCAN25Q6NSZ9 544 aa26.61■■□□□ 1.85
PCDH1-204ENST00000503492 HAND2P61296 217 aa26.6■■□□□ 1.85
PCDH1-204ENST00000503492 SLC9C2Q5TAH2 1124 aa26.6■■□□□ 1.85
PCDH1-204ENST00000503492 CHST3Q7LGC8 479 aa26.6■■□□□ 1.85
PCDH1-204ENST00000503492 IMMTQ16891 758 aaKnown RBP26.6■■□□□ 1.85
PCDH1-204ENST00000503492 LAMB2P55268 1798 aa26.59■■□□□ 1.85
PCDH1-204ENST00000503492 BCORQ6W2J9 1755 aa26.59■■□□□ 1.85
PCDH1-204ENST00000503492 SLC5A1P13866 664 aa26.59■■□□□ 1.85
PCDH1-204ENST00000503492 CSPP1Q1MSJ5 1256 aa26.59■■□□□ 1.85
PCDH1-204ENST00000503492 ZNF831Q5JPB2 1677 aa26.59■■□□□ 1.85
PCDH1-204ENST00000503492 UBAP1LF5GYI3 381 aa26.58■■□□□ 1.85
PCDH1-204ENST00000503492 IDH1O75874 414 aaKnown RBP26.58■■□□□ 1.85
PCDH1-204ENST00000503492 FAM173BQ6P4H8 233 aa26.58■■□□□ 1.85
PCDH1-204ENST00000503492 SMARCC2Q8TAQ2 1214 aa26.58■■□□□ 1.85
PCDH1-204ENST00000503492 ZNF652Q9Y2D9 606 aa26.58■■□□□ 1.85
PCDH1-204ENST00000503492 RTL9Q8NET4 1388 aa26.58■■□□□ 1.85
PCDH1-204ENST00000503492 KCNQ4P56696 695 aa26.58■■□□□ 1.85
PCDH1-204ENST00000503492 TPRNQ4KMQ1 711 aa26.58■■□□□ 1.85
PCDH1-204ENST00000503492 ATRNO75882 1429 aa26.58■■□□□ 1.85
PCDH1-204ENST00000503492 LLPHQ9BRT6 129 aaKnown RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms