RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 EHBP1Q8NDI1 1231 aa18.51■□□□□ 0.55
HMGXB3-202ENST00000503427 MAGI2Q86UL8 1455 aa18.51■□□□□ 0.55
HMGXB3-202ENST00000503427 PPFIA3O75145 1194 aa18.51■□□□□ 0.55
HMGXB3-202ENST00000503427 NAA16Q6N069 864 aaPredicted RBP18.51■□□□□ 0.55
HMGXB3-202ENST00000503427 RAB11FIP4Q86YS3 637 aa18.51■□□□□ 0.55
HMGXB3-202ENST00000503427 ALG1Q9BT22 464 aa18.51■□□□□ 0.55
HMGXB3-202ENST00000503427 FAM107BQ9H098 131 aa18.51■□□□□ 0.55
HMGXB3-202ENST00000503427 SLC4A4Q9Y6R1 1079 aa18.51■□□□□ 0.55
HMGXB3-202ENST00000503427 SSR1P43307 286 aaKnown RBP18.51■□□□□ 0.55
HMGXB3-202ENST00000503427 RMND1Q9NWS8 449 aa18.51■□□□□ 0.55
HMGXB3-202ENST00000503427 BLMP54132 1417 aaPredicted RBP18.5■□□□□ 0.55
HMGXB3-202ENST00000503427 GNAT2P19087 354 aa18.5■□□□□ 0.55
HMGXB3-202ENST00000503427 USP26Q9BXU7 913 aa18.5■□□□□ 0.55
HMGXB3-202ENST00000503427 UBA5Q9GZZ9 404 aa18.5■□□□□ 0.55
HMGXB3-202ENST00000503427 N4BP3O15049 544 aa18.5■□□□□ 0.55
HMGXB3-202ENST00000503427 NMIQ13287 307 aaPredicted RBP18.5■□□□□ 0.55
HMGXB3-202ENST00000503427 CTAGE1Q96RT6 745 aa18.5■□□□□ 0.55
HMGXB3-202ENST00000503427 PLCD4Q9BRC7 762 aa18.5■□□□□ 0.55
HMGXB3-202ENST00000503427 MATR3P43243 847 aaKnown RBP eCLIP18.5■□□□□ 0.55
HMGXB3-202ENST00000503427 DYDC1Q8WWB3 177 aa18.5■□□□□ 0.55
HMGXB3-202ENST00000503427 LRRC2Q9BYS8 371 aa18.5■□□□□ 0.55
HMGXB3-202ENST00000503427 SPATA31E1Q6ZUB1 1445 aa18.49■□□□□ 0.55
HMGXB3-202ENST00000503427 CFAP65Q6ZU64 1925 aaKnown RBP18.49■□□□□ 0.55
HMGXB3-202ENST00000503427 RNF113AO15541 343 aaKnown RBP18.49■□□□□ 0.55
HMGXB3-202ENST00000503427 LTKP29376 864 aa18.49■□□□□ 0.55
HMGXB3-202ENST00000503427 AK2P54819 239 aa18.49■□□□□ 0.55
HMGXB3-202ENST00000503427 METTL22Q9BUU2 404 aaPredicted RBP18.49■□□□□ 0.55
HMGXB3-202ENST00000503427 IFFO1Q0D2I5 559 aa18.49■□□□□ 0.55
HMGXB3-202ENST00000503427 ZNF804AQ7Z570 1209 aa18.49■□□□□ 0.55
HMGXB3-202ENST00000503427 DNAJC25Q9H1X3 360 aa18.49■□□□□ 0.55
HMGXB3-202ENST00000503427 BICC1Q9H694 974 aaKnown RBP18.49■□□□□ 0.55
HMGXB3-202ENST00000503427 G2E3Q7L622 706 aa18.49■□□□□ 0.55
HMGXB3-202ENST00000503427 NBPF7P0C2Y1 421 aaPredicted RBP18.49■□□□□ 0.55
HMGXB3-202ENST00000503427 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.49■□□□□ 0.55
HMGXB3-202ENST00000503427 IDEP14735 1019 aa18.48■□□□□ 0.55
HMGXB3-202ENST00000503427 TYRO3Q06418 890 aa18.48■□□□□ 0.55
HMGXB3-202ENST00000503427 SPAG1Q07617 926 aa18.48■□□□□ 0.55
HMGXB3-202ENST00000503427 CCDC40Q4G0X9 1142 aa18.48■□□□□ 0.55
HMGXB3-202ENST00000503427 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.48■□□□□ 0.55
HMGXB3-202ENST00000503427 LRRC27Q9C0I9 530 aa18.48■□□□□ 0.55
HMGXB3-202ENST00000503427 SLC52A2Q9HAB3 445 aa18.48■□□□□ 0.55
HMGXB3-202ENST00000503427 CHMLP26374 656 aa18.48■□□□□ 0.55
HMGXB3-202ENST00000503427 TFCP2Q12800 502 aa18.48■□□□□ 0.55
HMGXB3-202ENST00000503427 MICALCLQ6ZW33 695 aa18.48■□□□□ 0.55
HMGXB3-202ENST00000503427 GNAQP50148 359 aa18.48■□□□□ 0.55
HMGXB3-202ENST00000503427 KRT222Q8N1A0 295 aa18.48■□□□□ 0.55
HMGXB3-202ENST00000503427 ANKRD2Q9GZV1 360 aa18.47■□□□□ 0.55
HMGXB3-202ENST00000503427 SPDYE4A6NLX3 237 aa18.47■□□□□ 0.55
HMGXB3-202ENST00000503427 GTF2F1P35269 517 aaKnown RBP eCLIP18.47■□□□□ 0.55
HMGXB3-202ENST00000503427 PARP10Q53GL7 1025 aa18.47■□□□□ 0.55
HMGXB3-202ENST00000503427 DNA2P51530 1060 aa18.47■□□□□ 0.55
HMGXB3-202ENST00000503427 MAP2K1Q02750 393 aaPredicted RBP18.47■□□□□ 0.55
HMGXB3-202ENST00000503427 KIAA0232Q92628 1395 aa18.47■□□□□ 0.55
HMGXB3-202ENST00000503427 AOPEPQ8N6M6 819 aa18.47■□□□□ 0.55
HMGXB3-202ENST00000503427 TTC12Q9H892 705 aaPredicted RBP18.47■□□□□ 0.55
HMGXB3-202ENST00000503427 MYOM2P54296 1465 aa18.47■□□□□ 0.55
HMGXB3-202ENST00000503427 PAF1Q8N7H5 531 aa18.46■□□□□ 0.55
HMGXB3-202ENST00000503427 EFCAB6Q5THR3 1501 aa18.46■□□□□ 0.55
HMGXB3-202ENST00000503427 PREX2Q70Z35 1606 aa18.46■□□□□ 0.55
HMGXB3-202ENST00000503427 CTR9Q6PD62 1173 aa18.46■□□□□ 0.55
HMGXB3-202ENST00000503427 STX8Q9UNK0 236 aa18.46■□□□□ 0.55
HMGXB3-202ENST00000503427 TRAF1Q13077 416 aa18.46■□□□□ 0.55
HMGXB3-202ENST00000503427 TRIM47Q96LD4 638 aa18.46■□□□□ 0.55
HMGXB3-202ENST00000503427 FEZ1Q99689 392 aa18.46■□□□□ 0.55
HMGXB3-202ENST00000503427 CCDC113Q9H0I3 377 aa18.46■□□□□ 0.55
HMGXB3-202ENST00000503427 MYO1BO43795 1136 aa18.46■□□□□ 0.55
HMGXB3-202ENST00000503427 CETN1Q12798 172 aa18.46■□□□□ 0.55
HMGXB3-202ENST00000503427 CREB3L3Q68CJ9 461 aa18.46■□□□□ 0.55
HMGXB3-202ENST00000503427 IQSEC3Q9UPP2 1182 aaPredicted RBP18.46■□□□□ 0.55
HMGXB3-202ENST00000503427 RTN1Q16799 776 aa18.45■□□□□ 0.54
HMGXB3-202ENST00000503427 IFIT1BQ5T764 474 aaKnown RBP18.45■□□□□ 0.54
HMGXB3-202ENST00000503427 SRRTQ9BXP5 876 aaKnown RBP18.45■□□□□ 0.54
HMGXB3-202ENST00000503427 INCENPQ9NQS7 918 aa18.45■□□□□ 0.54
HMGXB3-202ENST00000503427 KDM2BQ8NHM5 1336 aa18.45■□□□□ 0.54
HMGXB3-202ENST00000503427 KAT6BQ8WYB5 2073 aa18.45■□□□□ 0.54
HMGXB3-202ENST00000503427 TTC37Q6PGP7 1564 aa18.45■□□□□ 0.54
HMGXB3-202ENST00000503427 SPTLC2O15270 562 aa18.45■□□□□ 0.54
HMGXB3-202ENST00000503427 TSPY3P0CV98 308 aa18.45■□□□□ 0.54
HMGXB3-202ENST00000503427 TSPY8P0CW00 308 aa18.45■□□□□ 0.54
HMGXB3-202ENST00000503427 LGR6Q9HBX8 967 aa18.45■□□□□ 0.54
HMGXB3-202ENST00000503427 DNAI1Q9UI46 699 aa18.45■□□□□ 0.54
HMGXB3-202ENST00000503427 GCOM1H8Y6P7 765 aaPredicted RBP18.45■□□□□ 0.54
HMGXB3-202ENST00000503427 WDHD1O75717 1129 aaPredicted RBP18.45■□□□□ 0.54
HMGXB3-202ENST00000503427 MYZAPP0CAP1 466 aa18.45■□□□□ 0.54
HMGXB3-202ENST00000503427 HLTFQ14527 1009 aaKnown RBP eCLIP18.45■□□□□ 0.54
HMGXB3-202ENST00000503427 JADE2Q9NQC1 790 aa18.44■□□□□ 0.54
HMGXB3-202ENST00000503427 SLAIN2Q9P270 581 aa18.44■□□□□ 0.54
HMGXB3-202ENST00000503427 RTL1A6NKG5 1358 aa18.44■□□□□ 0.54
HMGXB3-202ENST00000503427 MAGEB6P1A0A0J9YX57 407 aa18.44■□□□□ 0.54
HMGXB3-202ENST00000503427 PLCG2P16885 1265 aa18.44■□□□□ 0.54
HMGXB3-202ENST00000503427 RRAGBQ5VZM2 374 aa18.44■□□□□ 0.54
HMGXB3-202ENST00000503427 RUFY3Q7L099 469 aa18.44■□□□□ 0.54
HMGXB3-202ENST00000503427 PLEKHG1Q9ULL1 1385 aa18.44■□□□□ 0.54
HMGXB3-202ENST00000503427 EYA2O00167 538 aa18.44■□□□□ 0.54
HMGXB3-202ENST00000503427 CKAP4Q07065 602 aaKnown RBP18.44■□□□□ 0.54
HMGXB3-202ENST00000503427 TAOK3Q9H2K8 898 aa18.44■□□□□ 0.54
HMGXB3-202ENST00000503427 AOX1Q06278 1338 aa18.44■□□□□ 0.54
HMGXB3-202ENST00000503427 SPECC1Q5M775 1068 aa18.43■□□□□ 0.54
HMGXB3-202ENST00000503427 PRC1O43663 620 aa18.43■□□□□ 0.54
HMGXB3-202ENST00000503427 TRIM21P19474 475 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms