RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 NFKBIEO00221 500 aa10.18□□□□□ -0.78
NIPBL-203ENST00000503274 GNB5O14775 395 aa10.18□□□□□ -0.78
NIPBL-203ENST00000503274 P4HBP07237 508 aaKnown RBP10.18□□□□□ -0.78
NIPBL-203ENST00000503274 NID1P14543 1247 aa10.18□□□□□ -0.78
NIPBL-203ENST00000503274 MFAP1P55081 439 aaKnown RBP10.18□□□□□ -0.78
NIPBL-203ENST00000503274 ZKSCAN3Q9BRR0 538 aa10.18□□□□□ -0.78
NIPBL-203ENST00000503274 NPHS2Q9NP85 383 aa10.18□□□□□ -0.78
NIPBL-203ENST00000503274 TRPA1O75762 1119 aa10.17□□□□□ -0.78
NIPBL-203ENST00000503274 GDF6Q6KF10 455 aaPredicted RBP10.17□□□□□ -0.78
NIPBL-203ENST00000503274 NPAS4Q8IUM7 802 aa10.17□□□□□ -0.78
NIPBL-203ENST00000503274 POP1Q99575 1024 aaKnown RBP10.17□□□□□ -0.78
NIPBL-203ENST00000503274 TRIM33Q9UPN9 1127 aa10.17□□□□□ -0.78
NIPBL-203ENST00000503274 A0A1W2PP55 124 aa10.16□□□□□ -0.78
NIPBL-203ENST00000503274 PDE2AO00408 941 aaPredicted RBP10.16□□□□□ -0.78
NIPBL-203ENST00000503274 CACTIN-AS1Q8N1I8 211 aa10.16□□□□□ -0.78
NIPBL-203ENST00000503274 TMEM102Q8N9M5 508 aaPredicted RBP10.16□□□□□ -0.78
NIPBL-203ENST00000503274 ATP2B2Q01814 1243 aa10.15□□□□□ -0.78
NIPBL-203ENST00000503274 EAPPQ56P03 285 aaPredicted RBP10.15□□□□□ -0.78
NIPBL-203ENST00000503274 KIAA0319Q5VV43 1072 aa10.15□□□□□ -0.78
NIPBL-203ENST00000503274 EPS8L3Q8TE67 593 aaKnown RBP10.15□□□□□ -0.78
NIPBL-203ENST00000503274 NXPE3Q969Y0 559 aa10.15□□□□□ -0.78
NIPBL-203ENST00000503274 TRIM11Q96F44 468 aa10.15□□□□□ -0.78
NIPBL-203ENST00000503274 HHIPQ96QV1 700 aa10.15□□□□□ -0.78
NIPBL-203ENST00000503274 LDHBP07195 334 aaKnown RBP10.14□□□□□ -0.79
NIPBL-203ENST00000503274 MSL1Q68DK7 614 aa10.14□□□□□ -0.79
NIPBL-203ENST00000503274 ALG1LQ6GMV1 187 aa10.14□□□□□ -0.79
NIPBL-203ENST00000503274 WFDC8Q8IUA0 241 aa10.14□□□□□ -0.79
NIPBL-203ENST00000503274 IL22RA1Q8N6P7 574 aa10.14□□□□□ -0.79
NIPBL-203ENST00000503274 FBF1Q8TES7 1133 aa10.14□□□□□ -0.79
NIPBL-203ENST00000503274 PLVAPQ9BX97 442 aa10.14□□□□□ -0.79
NIPBL-203ENST00000503274 LACRTQ9GZZ8 138 aa10.14□□□□□ -0.79
NIPBL-203ENST00000503274 NLRP2Q9NX02 1062 aa10.14□□□□□ -0.79
NIPBL-203ENST00000503274 WWC3Q9ULE0 1092 aa10.14□□□□□ -0.79
NIPBL-203ENST00000503274 PTPRAP18433 802 aa10.13□□□□□ -0.79
NIPBL-203ENST00000503274 TRAPPC3LQ5T215 181 aa10.13□□□□□ -0.79
NIPBL-203ENST00000503274 SETDB2Q96T68 719 aa10.13□□□□□ -0.79
NIPBL-203ENST00000503274 EHD4Q9H223 541 aa10.13□□□□□ -0.79
NIPBL-203ENST00000503274 NOP53Q9NZM5 478 aaKnown RBP10.13□□□□□ -0.79
NIPBL-203ENST00000503274 SPDYE3A6NKU9 549 aa10.12□□□□□ -0.79
NIPBL-203ENST00000503274 GADD45BO75293 160 aaPredicted RBP10.12□□□□□ -0.79
NIPBL-203ENST00000503274 BAG6P46379 1132 aa10.12□□□□□ -0.79
NIPBL-203ENST00000503274 GPAT2Q6NUI2 795 aa10.12□□□□□ -0.79
NIPBL-203ENST00000503274 DMRTC2Q8IXT2 367 aaPredicted RBP10.12□□□□□ -0.79
NIPBL-203ENST00000503274 BHLHE41Q9C0J9 482 aaPredicted RBP10.12□□□□□ -0.79
NIPBL-203ENST00000503274 ADAM19Q9H013 955 aa10.12□□□□□ -0.79
NIPBL-203ENST00000503274 SUV39H2Q9H5I1 410 aa10.12□□□□□ -0.79
NIPBL-203ENST00000503274 LIN7BQ9HAP6 207 aa10.12□□□□□ -0.79
NIPBL-203ENST00000503274 FAM177BA6PVY3 158 aa10.11□□□□□ -0.79
NIPBL-203ENST00000503274 CDC27P30260 824 aa10.11□□□□□ -0.79
NIPBL-203ENST00000503274 FGD1P98174 961 aa10.11□□□□□ -0.79
NIPBL-203ENST00000503274 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.11□□□□□ -0.79
NIPBL-203ENST00000503274 PI16Q6UXB8 463 aa10.11□□□□□ -0.79
NIPBL-203ENST00000503274 ADAMTSL4Q6UY14 1074 aa10.11□□□□□ -0.79
NIPBL-203ENST00000503274 ILDR2Q71H61 639 aa10.11□□□□□ -0.79
NIPBL-203ENST00000503274 CCNJLQ8IV13 435 aa10.11□□□□□ -0.79
NIPBL-203ENST00000503274 TCF12Q99081 682 aa10.11□□□□□ -0.79
NIPBL-203ENST00000503274 MUC3BQ9H195 1237 aa10.1□□□□□ -0.79
NIPBL-203ENST00000503274 PPME1Q9Y570 386 aa10.1□□□□□ -0.79
NIPBL-203ENST00000503274 PRPF40AO75400 957 aaKnown RBP10.09□□□□□ -0.79
NIPBL-203ENST00000503274 FBXO33Q7Z6M2 555 aa10.09□□□□□ -0.79
NIPBL-203ENST00000503274 ASAP3Q8TDY4 903 aa10.09□□□□□ -0.79
NIPBL-203ENST00000503274 BSNDQ8WZ55 320 aa10.09□□□□□ -0.79
NIPBL-203ENST00000503274 SH2B1Q9NRF2 756 aaPredicted RBP10.09□□□□□ -0.79
NIPBL-203ENST00000503274 TRAK1Q9UPV9 953 aa10.09□□□□□ -0.79
NIPBL-203ENST00000503274 METTL12A8MUP2 240 aa10.08□□□□□ -0.8
NIPBL-203ENST00000503274 GRM2Q14416 872 aa10.08□□□□□ -0.8
NIPBL-203ENST00000503274 A0A0A0MRY4 1105 aa10.07□□□□□ -0.8
NIPBL-203ENST00000503274 CABP4P57796 275 aa10.07□□□□□ -0.8
NIPBL-203ENST00000503274 RAC1P63000 192 aa10.07□□□□□ -0.8
NIPBL-203ENST00000503274 TRIM28Q13263 835 aaKnown RBP10.07□□□□□ -0.8
NIPBL-203ENST00000503274 PRRT3Q5FWE3 981 aa10.07□□□□□ -0.8
NIPBL-203ENST00000503274 PRPF40BQ6NWY9 871 aaKnown RBP10.07□□□□□ -0.8
NIPBL-203ENST00000503274 DTWD1Q8N5C7 304 aa10.07□□□□□ -0.8
NIPBL-203ENST00000503274 BCO2Q9BYV7 579 aa10.07□□□□□ -0.8
NIPBL-203ENST00000503274 PPP4R2Q9NY27 417 aa10.07□□□□□ -0.8
NIPBL-203ENST00000503274 SOX13Q9UN79 622 aa10.07□□□□□ -0.8
NIPBL-203ENST00000503274 A0A096LPE4 126 aa10.06□□□□□ -0.8
NIPBL-203ENST00000503274 A0A1W2PPZ6 126 aa10.06□□□□□ -0.8
NIPBL-203ENST00000503274 IGHA1P01876 353 aa10.06□□□□□ -0.8
NIPBL-203ENST00000503274 EPHA1P21709 976 aa10.06□□□□□ -0.8
NIPBL-203ENST00000503274 COL8A1P27658 744 aa10.06□□□□□ -0.8
NIPBL-203ENST00000503274 CDC25BP30305 580 aa10.06□□□□□ -0.8
NIPBL-203ENST00000503274 GRIA4P48058 902 aa10.06□□□□□ -0.8
NIPBL-203ENST00000503274 SPG7Q9UQ90 795 aa10.06□□□□□ -0.8
NIPBL-203ENST00000503274 CCDC9Q9Y3X0 531 aaKnown RBP10.06□□□□□ -0.8
NIPBL-203ENST00000503274 LINC01387J3KSC0 135 aa10.05□□□□□ -0.8
NIPBL-203ENST00000503274 GIPC1O14908 333 aa10.05□□□□□ -0.8
NIPBL-203ENST00000503274 SPRED3Q2MJR0 410 aa10.05□□□□□ -0.8
NIPBL-203ENST00000503274 GLIS3Q8NEA6 775 aa10.05□□□□□ -0.8
NIPBL-203ENST00000503274 FRMD6Q96NE9 622 aa10.05□□□□□ -0.8
NIPBL-203ENST00000503274 DUSP9Q99956 384 aaKnown RBP10.05□□□□□ -0.8
NIPBL-203ENST00000503274 BCL2L13Q9BXK5 485 aa10.05□□□□□ -0.8
NIPBL-203ENST00000503274 SRA1Q9HD15 236 aaKnown RBP10.05□□□□□ -0.8
NIPBL-203ENST00000503274 ABCB6Q9NP58 842 aa10.05□□□□□ -0.8
NIPBL-203ENST00000503274 TMEM238LA0A1B0GVL6 79 aa10.04□□□□□ -0.8
NIPBL-203ENST00000503274 FAM229AH3BQW9 127 aa10.04□□□□□ -0.8
NIPBL-203ENST00000503274 H3BRJ5 948 aa10.04□□□□□ -0.8
NIPBL-203ENST00000503274 FAM117BQ6P1L5 589 aa10.04□□□□□ -0.8
NIPBL-203ENST00000503274 TXNDC11Q6PKC3 985 aa10.04□□□□□ -0.8
NIPBL-203ENST00000503274 NXPE4Q6UWF7 544 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms