RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 SMARCC1Q92922 1105 aaPredicted RBP13.79□□□□□ -0.2
USP46-204ENST00000503060 SGSM3Q96HU1 749 aa13.79□□□□□ -0.2
USP46-204ENST00000503060 LMBRD1Q9NUN5 540 aa13.79□□□□□ -0.2
USP46-204ENST00000503060 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.79□□□□□ -0.2
USP46-204ENST00000503060 TAF6LQ9Y6J9 622 aa13.79□□□□□ -0.2
USP46-204ENST00000503060 U3KPZ7 1027 aaPredicted RBP13.79□□□□□ -0.2
USP46-204ENST00000503060 MYH3P11055 1940 aa13.78□□□□□ -0.2
USP46-204ENST00000503060 GOLGA6L3A6NEY3 463 aa13.78□□□□□ -0.2
USP46-204ENST00000503060 LARGE1O95461 756 aa13.78□□□□□ -0.2
USP46-204ENST00000503060 KLHL40Q2TBA0 621 aa13.78□□□□□ -0.2
USP46-204ENST00000503060 METTL24Q5JXM2 366 aa13.78□□□□□ -0.2
USP46-204ENST00000503060 ZMYM1Q5SVZ6 1142 aa13.78□□□□□ -0.2
USP46-204ENST00000503060 BLOC1S2Q6QNY1 142 aa13.78□□□□□ -0.2
USP46-204ENST00000503060 LDHAL6AQ6ZMR3 332 aa13.78□□□□□ -0.2
USP46-204ENST00000503060 SH2B1Q9NRF2 756 aaPredicted RBP13.78□□□□□ -0.2
USP46-204ENST00000503060 MMP14P50281 582 aa13.78□□□□□ -0.2
USP46-204ENST00000503060 DDX49Q9Y6V7 483 aaKnown RBP13.78□□□□□ -0.2
USP46-204ENST00000503060 CAMTA2O94983 1202 aa13.77□□□□□ -0.21
USP46-204ENST00000503060 RPS6KB1P23443 525 aa13.77□□□□□ -0.21
USP46-204ENST00000503060 KRT32Q14532 448 aa13.77□□□□□ -0.21
USP46-204ENST00000503060 VPS72Q15906 364 aa13.77□□□□□ -0.21
USP46-204ENST00000503060 ATP2B3Q16720 1220 aa13.77□□□□□ -0.21
USP46-204ENST00000503060 FAM98CQ17RN3 349 aaKnown RBP13.77□□□□□ -0.21
USP46-204ENST00000503060 AK7Q96M32 723 aa13.77□□□□□ -0.21
USP46-204ENST00000503060 ALDH8A1Q9H2A2 487 aaPredicted RBP13.77□□□□□ -0.21
USP46-204ENST00000503060 CNNM1Q9NRU3 951 aa13.77□□□□□ -0.21
USP46-204ENST00000503060 WDR33Q9C0J8 1336 aaKnown RBP13.77□□□□□ -0.21
USP46-204ENST00000503060 RNF113AO15541 343 aaKnown RBP13.76□□□□□ -0.21
USP46-204ENST00000503060 KCNQ2O43526 872 aa13.76□□□□□ -0.21
USP46-204ENST00000503060 COL9A3Q14050 684 aaPredicted RBP13.76□□□□□ -0.21
USP46-204ENST00000503060 SUSD4Q5VX71 490 aa13.76□□□□□ -0.21
USP46-204ENST00000503060 SMC3Q9UQE7 1217 aa13.76□□□□□ -0.21
USP46-204ENST00000503060 BCL9LQ86UU0 1499 aa13.76□□□□□ -0.21
USP46-204ENST00000503060 SLFNL1Q499Z3 407 aa13.76□□□□□ -0.21
USP46-204ENST00000503060 CCDC83Q8IWF9 413 aa13.76□□□□□ -0.21
USP46-204ENST00000503060 NGLY1Q96IV0 654 aa13.76□□□□□ -0.21
USP46-204ENST00000503060 C8orf37Q96NL8 207 aa13.76□□□□□ -0.21
USP46-204ENST00000503060 PRPF40AO75400 957 aaKnown RBP13.75□□□□□ -0.21
USP46-204ENST00000503060 FKBP4Q02790 459 aaKnown RBP eCLIP13.75□□□□□ -0.21
USP46-204ENST00000503060 ANKRD1Q15327 319 aa13.75□□□□□ -0.21
USP46-204ENST00000503060 ME3Q16798 604 aa13.75□□□□□ -0.21
USP46-204ENST00000503060 CHAMP1Q96JM3 812 aa13.75□□□□□ -0.21
USP46-204ENST00000503060 TPCN1Q9ULQ1 816 aa13.75□□□□□ -0.21
USP46-204ENST00000503060 ABCC12Q96J65 1359 aa13.75□□□□□ -0.21
USP46-204ENST00000503060 MYH14Q7Z406 1995 aaKnown RBP13.75□□□□□ -0.21
USP46-204ENST00000503060 ST3GAL1Q11201 340 aa13.75□□□□□ -0.21
USP46-204ENST00000503060 PARP10Q53GL7 1025 aa13.75□□□□□ -0.21
USP46-204ENST00000503060 VGLL2Q8N8G2 317 aa13.75□□□□□ -0.21
USP46-204ENST00000503060 UTP14AQ9BVJ6 771 aaKnown RBP13.75□□□□□ -0.21
USP46-204ENST00000503060 LRP5O75197 1615 aa13.75□□□□□ -0.21
USP46-204ENST00000503060 CYP21A2P08686 494 aa13.74□□□□□ -0.21
USP46-204ENST00000503060 SCARF1Q14162 830 aa13.74□□□□□ -0.21
USP46-204ENST00000503060 LRRFIP1Q32MZ4 808 aaKnown RBP13.74□□□□□ -0.21
USP46-204ENST00000503060 DSCC1Q9BVC3 393 aa13.74□□□□□ -0.21
USP46-204ENST00000503060 ISY1Q9ULR0 285 aaKnown RBP13.74□□□□□ -0.21
USP46-204ENST00000503060 MAST3O60307 1309 aa13.74□□□□□ -0.21
USP46-204ENST00000503060 TCEANC2Q96MN5 208 aa13.74□□□□□ -0.21
USP46-204ENST00000503060 NEK1Q96PY6 1258 aa13.74□□□□□ -0.21
USP46-204ENST00000503060 HCLS1P14317 486 aaPredicted RBP13.73□□□□□ -0.21
USP46-204ENST00000503060 TOB2Q14106 344 aaPredicted RBP13.73□□□□□ -0.21
USP46-204ENST00000503060 TRAIPQ9BWF2 469 aa13.73□□□□□ -0.21
USP46-204ENST00000503060 COL5A3P25940 1745 aaPredicted RBP13.73□□□□□ -0.21
USP46-204ENST00000503060 FAM177BA6PVY3 158 aa13.73□□□□□ -0.21
USP46-204ENST00000503060 M0R2C6 588 aa13.73□□□□□ -0.21
USP46-204ENST00000503060 PDE8BO95263 885 aa13.73□□□□□ -0.21
USP46-204ENST00000503060 SYT1P21579 422 aa13.73□□□□□ -0.21
USP46-204ENST00000503060 ZAP70P43403 619 aa13.73□□□□□ -0.21
USP46-204ENST00000503060 NECAB1Q8N987 351 aa13.73□□□□□ -0.21
USP46-204ENST00000503060 ZNF831Q5JPB2 1677 aa13.73□□□□□ -0.21
USP46-204ENST00000503060 STX6O43752 255 aa13.72□□□□□ -0.21
USP46-204ENST00000503060 ZFYP08048 801 aaPredicted RBP13.72□□□□□ -0.21
USP46-204ENST00000503060 ZSCAN22P10073 491 aaPredicted RBP13.72□□□□□ -0.21
USP46-204ENST00000503060 XRCC6P12956 609 aaKnown RBP eCLIP13.72□□□□□ -0.21
USP46-204ENST00000503060 GJB2P29033 226 aa13.72□□□□□ -0.21
USP46-204ENST00000503060 AXDND1Q5T1B0 1012 aaPredicted RBP13.72□□□□□ -0.21
USP46-204ENST00000503060 FNBP4Q8N3X1 1017 aaPredicted RBP13.72□□□□□ -0.21
USP46-204ENST00000503060 ZNF512BQ96KM6 892 aaPredicted RBP13.72□□□□□ -0.21
USP46-204ENST00000503060 NTSR2O95665 410 aa13.72□□□□□ -0.21
USP46-204ENST00000503060 HSPD1P10809 573 aaKnown RBP13.72□□□□□ -0.21
USP46-204ENST00000503060 SPTY2D1Q68D10 685 aaPredicted RBP13.72□□□□□ -0.21
USP46-204ENST00000503060 OSBP2Q969R2 916 aa13.72□□□□□ -0.21
USP46-204ENST00000503060 NIP7Q9Y221 180 aaKnown RBP eCLIP13.72□□□□□ -0.21
USP46-204ENST00000503060 MROH5Q6ZUA9 1318 aa13.72□□□□□ -0.21
USP46-204ENST00000503060 MCAMP43121 646 aa13.71□□□□□ -0.21
USP46-204ENST00000503060 MRE11P49959 708 aa13.71□□□□□ -0.21
USP46-204ENST00000503060 LINC00116Q8NCU8 138 aa13.71□□□□□ -0.21
USP46-204ENST00000503060 GPT2Q8TD30 523 aa13.71□□□□□ -0.21
USP46-204ENST00000503060 PI16Q6UXB8 463 aa13.71□□□□□ -0.22
USP46-204ENST00000503060 STOX1Q6ZVD7 989 aa13.71□□□□□ -0.22
USP46-204ENST00000503060 ZNF652Q9Y2D9 606 aa13.71□□□□□ -0.22
USP46-204ENST00000503060 DDX60Q8IY21 1712 aaKnown RBP13.71□□□□□ -0.22
USP46-204ENST00000503060 BCORQ6W2J9 1755 aa13.7□□□□□ -0.22
USP46-204ENST00000503060 PUM3Q15397 648 aaKnown RBP13.7□□□□□ -0.22
USP46-204ENST00000503060 FOXD4L6Q3SYB3 417 aaPredicted RBP13.7□□□□□ -0.22
USP46-204ENST00000503060 CAVIN1Q6NZI2 390 aaKnown RBP13.7□□□□□ -0.22
USP46-204ENST00000503060 FOXD4L3Q6VB84 417 aaPredicted RBP13.7□□□□□ -0.22
USP46-204ENST00000503060 GAS2L3Q86XJ1 694 aa13.7□□□□□ -0.22
USP46-204ENST00000503060 RTL9Q8NET4 1388 aa13.7□□□□□ -0.22
USP46-204ENST00000503060 FGFR2P21802 821 aa13.7□□□□□ -0.22
USP46-204ENST00000503060 WASHC4Q2M389 1173 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms