RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 COL11A2P13942 1736 aaPredicted RBP16.36■□□□□ 0.21
SGCA-203ENST00000502555 TAF1P21675 1872 aa16.36■□□□□ 0.21
SGCA-203ENST00000502555 R3HDM1Q15032 1099 aaKnown RBP16.36■□□□□ 0.21
SGCA-203ENST00000502555 CAVIN4Q5BKX8 364 aa16.36■□□□□ 0.21
SGCA-203ENST00000502555 SP8Q8IXZ3 490 aa16.36■□□□□ 0.21
SGCA-203ENST00000502555 RUFY2Q8WXA3 655 aa16.36■□□□□ 0.21
SGCA-203ENST00000502555 GNL3LQ9NVN8 582 aaKnown RBP16.36■□□□□ 0.21
SGCA-203ENST00000502555 ANKIB1Q9P2G1 1089 aa16.36■□□□□ 0.21
SGCA-203ENST00000502555 ATP6V0A2Q9Y487 856 aa16.36■□□□□ 0.21
SGCA-203ENST00000502555 LRRC37AA6NMS7 1700 aa16.35■□□□□ 0.21
SGCA-203ENST00000502555 GOLIM4O00461 696 aa16.35■□□□□ 0.21
SGCA-203ENST00000502555 ATP2B4P23634 1241 aa16.35■□□□□ 0.21
SGCA-203ENST00000502555 POLD1P28340 1107 aa16.35■□□□□ 0.21
SGCA-203ENST00000502555 MCAMP43121 646 aa16.35■□□□□ 0.21
SGCA-203ENST00000502555 SCARF1Q14162 830 aa16.35■□□□□ 0.21
SGCA-203ENST00000502555 LRRFIP1Q32MZ4 808 aaKnown RBP16.35■□□□□ 0.21
SGCA-203ENST00000502555 C15orf52Q6ZUT6 534 aaKnown RBP16.35■□□□□ 0.21
SGCA-203ENST00000502555 PODXL2Q9NZ53 605 aa16.35■□□□□ 0.21
SGCA-203ENST00000502555 RAD50Q92878 1312 aa16.34■□□□□ 0.21
SGCA-203ENST00000502555 ZBTB7AO95365 584 aa16.34■□□□□ 0.21
SGCA-203ENST00000502555 FKBP4Q02790 459 aaKnown RBP eCLIP16.34■□□□□ 0.21
SGCA-203ENST00000502555 TTF1Q15361 905 aaPredicted RBP16.34■□□□□ 0.21
SGCA-203ENST00000502555 CNKSR1Q969H4 720 aa16.34■□□□□ 0.21
SGCA-203ENST00000502555 EDC3Q96F86 508 aaKnown RBP16.34■□□□□ 0.21
SGCA-203ENST00000502555 TBC1D32Q96NH3 1257 aa16.34■□□□□ 0.21
SGCA-203ENST00000502555 SEMA3EO15041 775 aa16.33■□□□□ 0.2
SGCA-203ENST00000502555 SGSM2O43147 1006 aa16.33■□□□□ 0.2
SGCA-203ENST00000502555 EPB41L2O43491 1005 aaKnown RBP16.33■□□□□ 0.2
SGCA-203ENST00000502555 BCAMP50895 628 aa16.33■□□□□ 0.2
SGCA-203ENST00000502555 GPSM2P81274 684 aa16.33■□□□□ 0.2
SGCA-203ENST00000502555 FBXO33Q7Z6M2 555 aa16.33■□□□□ 0.2
SGCA-203ENST00000502555 SPATA5Q8NB90 893 aa16.33■□□□□ 0.2
SGCA-203ENST00000502555 TMX4Q9H1E5 349 aaPredicted RBP16.33■□□□□ 0.2
SGCA-203ENST00000502555 GGA1Q9UJY5 639 aa16.33■□□□□ 0.2
SGCA-203ENST00000502555 IRS2Q9Y4H2 1338 aa16.32■□□□□ 0.2
SGCA-203ENST00000502555 ZAP70P43403 619 aa16.32■□□□□ 0.2
SGCA-203ENST00000502555 RASGRF1Q13972 1273 aa16.32■□□□□ 0.2
SGCA-203ENST00000502555 VPS37DQ86XT2 251 aa16.32■□□□□ 0.2
SGCA-203ENST00000502555 ZNF622Q969S3 477 aaKnown RBP eCLIP16.32■□□□□ 0.2
SGCA-203ENST00000502555 FAM84BQ96KN1 310 aaPredicted RBP16.32■□□□□ 0.2
SGCA-203ENST00000502555 C22orf23Q9BZE7 217 aa16.32■□□□□ 0.2
SGCA-203ENST00000502555 SNRKQ9NRH2 765 aa16.32■□□□□ 0.2
SGCA-203ENST00000502555 HMG20BQ9P0W2 317 aa16.32■□□□□ 0.2
SGCA-203ENST00000502555 NDUFB9Q9Y6M9 179 aa16.32■□□□□ 0.2
SGCA-203ENST00000502555 AK9Q5TCS8 1911 aa16.32■□□□□ 0.2
SGCA-203ENST00000502555 PDS5AQ29RF7 1337 aaKnown RBP16.32■□□□□ 0.2
SGCA-203ENST00000502555 UFL1O94874 794 aa16.31■□□□□ 0.2
SGCA-203ENST00000502555 ZFYP08048 801 aaPredicted RBP16.31■□□□□ 0.2
SGCA-203ENST00000502555 HIBADHP31937 336 aaKnown RBP16.31■□□□□ 0.2
SGCA-203ENST00000502555 GYG1P46976 350 aa16.31■□□□□ 0.2
SGCA-203ENST00000502555 CWC27Q6UX04 472 aaKnown RBP16.31■□□□□ 0.2
SGCA-203ENST00000502555 NSFL1CQ9UNZ2 370 aaKnown RBP16.31■□□□□ 0.2
SGCA-203ENST00000502555 WTIPA6NIX2 430 aaPredicted RBP16.3■□□□□ 0.2
SGCA-203ENST00000502555 KLRK1P26718 216 aa16.3■□□□□ 0.2
SGCA-203ENST00000502555 CHRNA5P30532 468 aa16.3■□□□□ 0.2
SGCA-203ENST00000502555 ANP32AP39687 249 aaKnown RBP16.3■□□□□ 0.2
SGCA-203ENST00000502555 RBM25P49756 843 aaKnown RBP16.3■□□□□ 0.2
SGCA-203ENST00000502555 NMIQ13287 307 aaPredicted RBP16.3■□□□□ 0.2
SGCA-203ENST00000502555 PRPF40BQ6NWY9 871 aaKnown RBP16.3■□□□□ 0.2
SGCA-203ENST00000502555 PI16Q6UXB8 463 aa16.3■□□□□ 0.2
SGCA-203ENST00000502555 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.3■□□□□ 0.2
SGCA-203ENST00000502555 ANTXR1Q9H6X2 564 aa16.3■□□□□ 0.2
SGCA-203ENST00000502555 DENND2AQ9ULE3 1009 aa16.3■□□□□ 0.2
SGCA-203ENST00000502555 LTBP1Q14766 1721 aa16.29■□□□□ 0.2
SGCA-203ENST00000502555 MED23Q9ULK4 1368 aa16.29■□□□□ 0.2
SGCA-203ENST00000502555 CYP2E1P05181 493 aaPredicted RBP16.29■□□□□ 0.2
SGCA-203ENST00000502555 CC2D2BQ6DHV5 1058 aa16.29■□□□□ 0.2
SGCA-203ENST00000502555 ZSCAN25Q6NSZ9 544 aa16.29■□□□□ 0.2
SGCA-203ENST00000502555 ZNF804AQ7Z570 1209 aa16.29■□□□□ 0.2
SGCA-203ENST00000502555 TBC1D16Q8TBP0 767 aa16.29■□□□□ 0.2
SGCA-203ENST00000502555 USP26Q9BXU7 913 aa16.29■□□□□ 0.2
SGCA-203ENST00000502555 ATF5Q9Y2D1 282 aaPredicted RBP16.29■□□□□ 0.2
SGCA-203ENST00000502555 KIF13BQ9NQT8 1826 aa16.28■□□□□ 0.2
SGCA-203ENST00000502555 RNF113AO15541 343 aaKnown RBP16.28■□□□□ 0.2
SGCA-203ENST00000502555 TGFB2P61812 414 aa16.28■□□□□ 0.2
SGCA-203ENST00000502555 KIAA1211Q6ZU35 1233 aa16.28■□□□□ 0.2
SGCA-203ENST00000502555 SLC51AQ86UW1 340 aa16.28■□□□□ 0.2
SGCA-203ENST00000502555 MPNDQ8N594 471 aa16.28■□□□□ 0.2
SGCA-203ENST00000502555 FAM227BQ96M60 508 aa16.28■□□□□ 0.2
SGCA-203ENST00000502555 SGIP1Q9BQI5 828 aa16.28■□□□□ 0.2
SGCA-203ENST00000502555 ANO2Q9NQ90 1003 aa16.28■□□□□ 0.2
SGCA-203ENST00000502555 AKAP11Q9UKA4 1901 aa16.28■□□□□ 0.2
SGCA-203ENST00000502555 A0A0D9SFI3 127 aa16.27■□□□□ 0.2
SGCA-203ENST00000502555 GRIPAP1Q4V328 841 aa16.27■□□□□ 0.2
SGCA-203ENST00000502555 ZMYM1Q5SVZ6 1142 aa16.27■□□□□ 0.2
SGCA-203ENST00000502555 DPP8Q6V1X1 898 aaPredicted RBP16.27■□□□□ 0.2
SGCA-203ENST00000502555 IL25Q9H293 177 aa16.27■□□□□ 0.2
SGCA-203ENST00000502555 PIH1D3Q9NQM4 214 aaKnown RBP16.27■□□□□ 0.2
SGCA-203ENST00000502555 HELLSQ9NRZ9 838 aa16.27■□□□□ 0.2
SGCA-203ENST00000502555 DLEC1Q9Y238 1755 aa16.27■□□□□ 0.2
SGCA-203ENST00000502555 COL1A1P02452 1464 aaPredicted RBP16.27■□□□□ 0.2
SGCA-203ENST00000502555 PSDA5PKW4 1024 aaPredicted RBP16.26■□□□□ 0.19
SGCA-203ENST00000502555 C6orf229H3BNL8 230 aa16.26■□□□□ 0.19
SGCA-203ENST00000502555 IGSF3O75054 1194 aa16.26■□□□□ 0.19
SGCA-203ENST00000502555 MCCP23508 829 aa16.26■□□□□ 0.19
SGCA-203ENST00000502555 MAP3K12Q12852 859 aa16.26■□□□□ 0.19
SGCA-203ENST00000502555 WASHC4Q2M389 1173 aa16.26■□□□□ 0.19
SGCA-203ENST00000502555 MCMDC2Q4G0Z9 681 aa16.26■□□□□ 0.19
SGCA-203ENST00000502555 TXNRD3Q86VQ6 643 aa16.26■□□□□ 0.19
SGCA-203ENST00000502555 TTLL6Q8N841 843 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms