RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 NF2P35240 595 aa11.86□□□□□ -0.51
CCDC171-209ENST00000498725 GMLQ99445 158 aa11.86□□□□□ -0.51
CCDC171-209ENST00000498725 CHL1O00533 1208 aa11.85□□□□□ -0.51
CCDC171-209ENST00000498725 TM4SF4P48230 202 aa11.85□□□□□ -0.51
CCDC171-209ENST00000498725 PTPN12Q05209 780 aaKnown RBP11.85□□□□□ -0.51
CCDC171-209ENST00000498725 CCDC152Q4G0S7 254 aa11.85□□□□□ -0.51
CCDC171-209ENST00000498725 ANKRD18AQ8IVF6 992 aa11.85□□□□□ -0.51
CCDC171-209ENST00000498725 ZBTB38Q8NAP3 1195 aaPredicted RBP11.85□□□□□ -0.51
CCDC171-209ENST00000498725 PHAXQ9H814 394 aaKnown RBP11.85□□□□□ -0.51
CCDC171-209ENST00000498725 HYPKQ9NX55 129 aa11.85□□□□□ -0.51
CCDC171-209ENST00000498725 XDHP47989 1333 aa11.85□□□□□ -0.51
CCDC171-209ENST00000498725 POTEFA5A3E0 1075 aa11.84□□□□□ -0.51
CCDC171-209ENST00000498725 ELL2O00472 640 aaPredicted RBP11.84□□□□□ -0.51
CCDC171-209ENST00000498725 GOLGA2Q08379 1002 aa11.84□□□□□ -0.51
CCDC171-209ENST00000498725 SREBF2Q12772 1141 aa11.84□□□□□ -0.51
CCDC171-209ENST00000498725 HABP4Q5JVS0 413 aaKnown RBP11.84□□□□□ -0.51
CCDC171-209ENST00000498725 DUSP27Q5VZP5 1158 aa11.84□□□□□ -0.51
CCDC171-209ENST00000498725 GCC1Q96CN9 775 aa11.84□□□□□ -0.51
CCDC171-209ENST00000498725 TRIM17Q9Y577 477 aa11.84□□□□□ -0.51
CCDC171-209ENST00000498725 WNT10BO00744 389 aa11.83□□□□□ -0.52
CCDC171-209ENST00000498725 PDE8AO60658 829 aa11.83□□□□□ -0.52
CCDC171-209ENST00000498725 ATP2B4P23634 1241 aa11.83□□□□□ -0.52
CCDC171-209ENST00000498725 ARMC9Q7Z3E5 817 aa11.83□□□□□ -0.52
CCDC171-209ENST00000498725 OGFOD1Q8N543 542 aa11.83□□□□□ -0.52
CCDC171-209ENST00000498725 ANGEL1Q9UNK9 670 aaKnown RBP11.83□□□□□ -0.52
CCDC171-209ENST00000498725 TRIM35Q9UPQ4 493 aa11.83□□□□□ -0.52
CCDC171-209ENST00000498725 ZNF609O15014 1411 aa11.83□□□□□ -0.52
CCDC171-209ENST00000498725 ECM29Q5VYK3 1845 aa11.83□□□□□ -0.52
CCDC171-209ENST00000498725 TRIM28Q13263 835 aaKnown RBP11.82□□□□□ -0.52
CCDC171-209ENST00000498725 PODNQ7Z5L7 613 aa11.82□□□□□ -0.52
CCDC171-209ENST00000498725 RBBP6Q7Z6E9 1792 aaKnown RBP11.82□□□□□ -0.52
CCDC171-209ENST00000498725 PCCAP05165 728 aaPredicted RBP11.81□□□□□ -0.52
CCDC171-209ENST00000498725 HSP90B1P14625 803 aaKnown RBP11.81□□□□□ -0.52
CCDC171-209ENST00000498725 DACT2Q5SW24 774 aa11.81□□□□□ -0.52
CCDC171-209ENST00000498725 SPRYD7Q5W111 196 aa11.81□□□□□ -0.52
CCDC171-209ENST00000498725 KIAA0825Q8IV33 1275 aa11.81□□□□□ -0.52
CCDC171-209ENST00000498725 SLC10A4Q96EP9 437 aa11.81□□□□□ -0.52
CCDC171-209ENST00000498725 CWC25Q9NXE8 425 aaPredicted RBP11.81□□□□□ -0.52
CCDC171-209ENST00000498725 HOXB7P09629 217 aa11.8□□□□□ -0.52
CCDC171-209ENST00000498725 CCT4P50991 539 aaKnown RBP11.8□□□□□ -0.52
CCDC171-209ENST00000498725 OTOP1Q7RTM1 612 aa11.8□□□□□ -0.52
CCDC171-209ENST00000498725 TXNRD3Q86VQ6 643 aa11.8□□□□□ -0.52
CCDC171-209ENST00000498725 CCDC191Q8NCU4 936 aa11.8□□□□□ -0.52
CCDC171-209ENST00000498725 CD99L2Q8TCZ2 262 aa11.8□□□□□ -0.52
CCDC171-209ENST00000498725 CLMNQ96JQ2 1002 aa11.8□□□□□ -0.52
CCDC171-209ENST00000498725 MBIPQ9NS73 344 aa11.8□□□□□ -0.52
CCDC171-209ENST00000498725 MINPP1Q9UNW1 487 aa11.8□□□□□ -0.52
CCDC171-209ENST00000498725 MED23Q9ULK4 1368 aa11.79□□□□□ -0.52
CCDC171-209ENST00000498725 EN2P19622 333 aaPredicted RBP11.79□□□□□ -0.52
CCDC171-209ENST00000498725 CTSWP56202 376 aa11.79□□□□□ -0.52
CCDC171-209ENST00000498725 NOM1Q5C9Z4 860 aaKnown RBP11.79□□□□□ -0.52
CCDC171-209ENST00000498725 CHRDL2Q6WN34 429 aa11.79□□□□□ -0.52
CCDC171-209ENST00000498725 IFNL1Q8IU54 200 aa11.79□□□□□ -0.52
CCDC171-209ENST00000498725 APOBEC3FQ8IUX4 373 aaKnown RBP11.79□□□□□ -0.52
CCDC171-209ENST00000498725 RUNDC1Q96C34 613 aa11.79□□□□□ -0.52
CCDC171-209ENST00000498725 CDC5LQ99459 802 aaKnown RBP11.79□□□□□ -0.52
CCDC171-209ENST00000498725 LAMB1P07942 1786 aa11.79□□□□□ -0.52
CCDC171-209ENST00000498725 MANSC4A6NHS7 340 aaPredicted RBP11.78□□□□□ -0.52
CCDC171-209ENST00000498725 IGF2BP3O00425 579 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCDC171-209ENST00000498725 ALDH1A1P00352 501 aa11.78□□□□□ -0.52
CCDC171-209ENST00000498725 KLRK1P26718 216 aa11.78□□□□□ -0.52
CCDC171-209ENST00000498725 GTF2IP78347 998 aa11.78□□□□□ -0.52
CCDC171-209ENST00000498725 WDR43Q15061 677 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCDC171-209ENST00000498725 STRIP1Q5VSL9 837 aa11.78□□□□□ -0.52
CCDC171-209ENST00000498725 TTLL5Q6EMB2 1281 aa11.78□□□□□ -0.52
CCDC171-209ENST00000498725 GREM2Q9H772 168 aa11.78□□□□□ -0.52
CCDC171-209ENST00000498725 PCDHAC2Q9Y5I4 1007 aa11.78□□□□□ -0.52
CCDC171-209ENST00000498725 MYO3BQ8WXR4 1341 aa11.78□□□□□ -0.52
CCDC171-209ENST00000498725 OTOFQ9HC10 1997 aa11.78□□□□□ -0.52
CCDC171-209ENST00000498725 CLRN2A0PK11 232 aa11.77□□□□□ -0.53
CCDC171-209ENST00000498725 F8W031 263 aaPredicted RBP11.77□□□□□ -0.53
CCDC171-209ENST00000498725 MYCP01106 439 aaPredicted RBP11.77□□□□□ -0.53
CCDC171-209ENST00000498725 LDLRAD1Q5T700 205 aa11.77□□□□□ -0.53
CCDC171-209ENST00000498725 TTLL11Q8NHH1 800 aa11.77□□□□□ -0.53
CCDC171-209ENST00000498725 WNK4Q96J92 1243 aa11.77□□□□□ -0.53
CCDC171-209ENST00000498725 METTL22Q9BUU2 404 aaPredicted RBP11.77□□□□□ -0.53
CCDC171-209ENST00000498725 CFHR5Q9BXR6 569 aa11.77□□□□□ -0.53
CCDC171-209ENST00000498725 COA1Q9GZY4 146 aa11.77□□□□□ -0.53
CCDC171-209ENST00000498725 MAP3K2Q9Y2U5 619 aa11.77□□□□□ -0.53
CCDC171-209ENST00000498725 ZSWIM8A7E2V4 1837 aa11.76□□□□□ -0.53
CCDC171-209ENST00000498725 DDX58O95786 925 aaKnown RBP11.76□□□□□ -0.53
CCDC171-209ENST00000498725 DLGAP5Q15398 846 aa11.76□□□□□ -0.53
CCDC171-209ENST00000498725 INTS3Q68E01 1043 aaKnown RBP11.76□□□□□ -0.53
CCDC171-209ENST00000498725 ERO1AQ96HE7 468 aa11.76□□□□□ -0.53
CCDC171-209ENST00000498725 DEFB129Q9H1M3 183 aa11.76□□□□□ -0.53
CCDC171-209ENST00000498725 BSDC1Q9NW68 430 aaPredicted RBP11.76□□□□□ -0.53
CCDC171-209ENST00000498725 PTPN22Q9Y2R2 807 aa11.76□□□□□ -0.53
CCDC171-209ENST00000498725 A0A1B0GUL6 1792 aa11.76□□□□□ -0.53
CCDC171-209ENST00000498725 SSC5DA1L4H1 1573 aa11.75□□□□□ -0.53
CCDC171-209ENST00000498725 IGHMBP2P38935 993 aaKnown RBP11.75□□□□□ -0.53
CCDC171-209ENST00000498725 KCNJ4P48050 445 aa11.75□□□□□ -0.53
CCDC171-209ENST00000498725 INHBEP58166 350 aa11.75□□□□□ -0.53
CCDC171-209ENST00000498725 CRHR2Q13324 411 aa11.75□□□□□ -0.53
CCDC171-209ENST00000498725 CWF19L2Q2TBE0 894 aaKnown RBP11.75□□□□□ -0.53
CCDC171-209ENST00000498725 C8orf58Q8NAV2 365 aa11.75□□□□□ -0.53
CCDC171-209ENST00000498725 EFCC1Q9HA90 598 aa11.75□□□□□ -0.53
CCDC171-209ENST00000498725 VEZTQ9HBM0 779 aa11.75□□□□□ -0.53
CCDC171-209ENST00000498725 ZNF804BA4D1E1 1349 aa11.75□□□□□ -0.53
CCDC171-209ENST00000498725 SNAP23O00161 211 aa11.74□□□□□ -0.53
CCDC171-209ENST00000498725 PPP1R12BO60237 982 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms