RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 WDR63Q8IWG1 891 aa14.08□□□□□ -0.16
LSAMP-206ENST00000498645 MPHOSPH8Q99549 860 aa14.08□□□□□ -0.16
LSAMP-206ENST00000498645 CASP8AP2Q9UKL3 1982 aa14.07□□□□□ -0.16
LSAMP-206ENST00000498645 ZNF646O15015 1829 aaPredicted RBP14.07□□□□□ -0.16
LSAMP-206ENST00000498645 F6X3S4 739 aa14.07□□□□□ -0.16
LSAMP-206ENST00000498645 VAMP4O75379 141 aa14.07□□□□□ -0.16
LSAMP-206ENST00000498645 BRPF1P55201 1214 aaPredicted RBP14.07□□□□□ -0.16
LSAMP-206ENST00000498645 ZNF280AP59817 542 aaPredicted RBP14.07□□□□□ -0.16
LSAMP-206ENST00000498645 PODNQ7Z5L7 613 aa14.07□□□□□ -0.16
LSAMP-206ENST00000498645 LINS1Q8NG48 757 aa14.07□□□□□ -0.16
LSAMP-206ENST00000498645 ZIC5Q96T25 663 aa14.07□□□□□ -0.16
LSAMP-206ENST00000498645 MXD3Q9BW11 206 aa14.07□□□□□ -0.16
LSAMP-206ENST00000498645 MYOZ2Q9NPC6 264 aa14.07□□□□□ -0.16
LSAMP-206ENST00000498645 SCAF8Q9UPN6 1271 aaKnown RBP14.07□□□□□ -0.16
LSAMP-206ENST00000498645 CHMP3Q9Y3E7 222 aa14.07□□□□□ -0.16
LSAMP-206ENST00000498645 ZNF609O15014 1411 aa14.07□□□□□ -0.16
LSAMP-206ENST00000498645 KCNJ4P48050 445 aa14.06□□□□□ -0.16
LSAMP-206ENST00000498645 NOGQ13253 232 aa14.06□□□□□ -0.16
LSAMP-206ENST00000498645 NCBP3Q53F19 620 aaKnown RBP14.06□□□□□ -0.16
LSAMP-206ENST00000498645 RGMBQ6NW40 437 aa14.06□□□□□ -0.16
LSAMP-206ENST00000498645 CDCA5Q96FF9 252 aa14.06□□□□□ -0.16
LSAMP-206ENST00000498645 SPINK5Q9NQ38 1064 aaPredicted RBP14.06□□□□□ -0.16
LSAMP-206ENST00000498645 A0A1B0GUL6 1792 aa14.06□□□□□ -0.16
LSAMP-206ENST00000498645 KLRK1P26718 216 aa14.05□□□□□ -0.16
LSAMP-206ENST00000498645 ZNF157P51786 506 aaPredicted RBP14.05□□□□□ -0.16
LSAMP-206ENST00000498645 CASP7P55210 303 aa14.05□□□□□ -0.16
LSAMP-206ENST00000498645 TXNRD3Q86VQ6 643 aa14.05□□□□□ -0.16
LSAMP-206ENST00000498645 ABHD8Q96I13 439 aa14.05□□□□□ -0.16
LSAMP-206ENST00000498645 GMLQ99445 158 aa14.05□□□□□ -0.16
LSAMP-206ENST00000498645 PLA2G12BQ9BX93 195 aa14.05□□□□□ -0.16
LSAMP-206ENST00000498645 ZNF804BA4D1E1 1349 aa14.05□□□□□ -0.16
LSAMP-206ENST00000498645 ANKRD18BA2A2Z9 1011 aa14.04□□□□□ -0.16
LSAMP-206ENST00000498645 CA12O43570 354 aa14.04□□□□□ -0.16
LSAMP-206ENST00000498645 CHRNDQ07001 517 aa14.04□□□□□ -0.16
LSAMP-206ENST00000498645 DACT2Q5SW24 774 aa14.04□□□□□ -0.16
LSAMP-206ENST00000498645 OGFOD1Q8N543 542 aa14.04□□□□□ -0.16
LSAMP-206ENST00000498645 ANKRD2Q9GZV1 360 aa14.04□□□□□ -0.16
LSAMP-206ENST00000498645 COA1Q9GZY4 146 aa14.04□□□□□ -0.16
LSAMP-206ENST00000498645 LEMD3Q9Y2U8 911 aa14.04□□□□□ -0.16
LSAMP-206ENST00000498645 AKAP11Q9UKA4 1901 aa14.03□□□□□ -0.16
LSAMP-206ENST00000498645 FAM155AB1AL88 458 aaPredicted RBP14.03□□□□□ -0.16
LSAMP-206ENST00000498645 CSF1RP07333 972 aa14.03□□□□□ -0.16
LSAMP-206ENST00000498645 NBPF9Q3BBW0 867 aa14.03□□□□□ -0.16
LSAMP-206ENST00000498645 HELBQ8NG08 1087 aaPredicted RBP14.03□□□□□ -0.16
LSAMP-206ENST00000498645 CCDC102AQ96A19 550 aa14.03□□□□□ -0.16
LSAMP-206ENST00000498645 PAPPA2Q9BXP8 1791 aa14.02□□□□□ -0.16
LSAMP-206ENST00000498645 MYO3BQ8WXR4 1341 aa14.02□□□□□ -0.17
LSAMP-206ENST00000498645 TAF5LO75529 589 aa14.02□□□□□ -0.17
LSAMP-206ENST00000498645 SASH1O94885 1247 aa14.02□□□□□ -0.17
LSAMP-206ENST00000498645 KIF23Q02241 960 aaPredicted RBP14.02□□□□□ -0.17
LSAMP-206ENST00000498645 IFIT5Q13325 482 aaKnown RBP14.02□□□□□ -0.17
LSAMP-206ENST00000498645 BEND3Q5T5X7 828 aa14.02□□□□□ -0.17
LSAMP-206ENST00000498645 STRIP1Q5VSL9 837 aa14.02□□□□□ -0.17
LSAMP-206ENST00000498645 PRAMEF18Q5VWM3 479 aa14.02□□□□□ -0.17
LSAMP-206ENST00000498645 TTLL5Q6EMB2 1281 aa14.02□□□□□ -0.17
LSAMP-206ENST00000498645 SLC4A10Q6U841 1118 aa14.02□□□□□ -0.17
LSAMP-206ENST00000498645 PITPNM2Q9BZ72 1349 aa14.01□□□□□ -0.17
LSAMP-206ENST00000498645 SNAP23O00161 211 aa14.01□□□□□ -0.17
LSAMP-206ENST00000498645 GTF2IP78347 998 aa14.01□□□□□ -0.17
LSAMP-206ENST00000498645 TTLL12Q14166 644 aaPredicted RBP14.01□□□□□ -0.17
LSAMP-206ENST00000498645 TAF7LQ5H9L4 462 aa14.01□□□□□ -0.17
LSAMP-206ENST00000498645 KIAA0825Q8IV33 1275 aa14.01□□□□□ -0.17
LSAMP-206ENST00000498645 CCDC85CA6NKD9 419 aa14□□□□□ -0.17
LSAMP-206ENST00000498645 PLIN1O60240 522 aa14□□□□□ -0.17
LSAMP-206ENST00000498645 SLC10A3P09131 477 aa14□□□□□ -0.17
LSAMP-206ENST00000498645 FOXO4P98177 505 aa14□□□□□ -0.17
LSAMP-206ENST00000498645 EPHA10Q5JZY3 1008 aa14□□□□□ -0.17
LSAMP-206ENST00000498645 LMBR1LQ6UX01 489 aa14□□□□□ -0.17
LSAMP-206ENST00000498645 MOB2Q70IA6 237 aa14□□□□□ -0.17
LSAMP-206ENST00000498645 C9orf78Q9NZ63 289 aaPredicted RBP14□□□□□ -0.17
LSAMP-206ENST00000498645 GRM8O00222 908 aa13.99□□□□□ -0.17
LSAMP-206ENST00000498645 WNT10BO00744 389 aa13.99□□□□□ -0.17
LSAMP-206ENST00000498645 CCDC57Q2TAC2 916 aa13.99□□□□□ -0.17
LSAMP-206ENST00000498645 ZNF594Q96JF6 807 aaPredicted RBP13.99□□□□□ -0.17
LSAMP-206ENST00000498645 CD209Q9NNX6 404 aa13.99□□□□□ -0.17
LSAMP-206ENST00000498645 HDAC9Q9UKV0 1011 aa13.99□□□□□ -0.17
LSAMP-206ENST00000498645 UBE2Q2LH0YL09 131 aa13.98□□□□□ -0.17
LSAMP-206ENST00000498645 TRPA1O75762 1119 aa13.98□□□□□ -0.17
LSAMP-206ENST00000498645 DGKZQ13574 1117 aa13.98□□□□□ -0.17
LSAMP-206ENST00000498645 ZNF804AQ7Z570 1209 aa13.98□□□□□ -0.17
LSAMP-206ENST00000498645 RASAL3Q86YV0 1011 aa13.98□□□□□ -0.17
LSAMP-206ENST00000498645 MCOLN1Q9GZU1 580 aa13.98□□□□□ -0.17
LSAMP-206ENST00000498645 CNNM1Q9NRU3 951 aa13.98□□□□□ -0.17
LSAMP-206ENST00000498645 JAG2Q9Y219 1238 aa13.98□□□□□ -0.17
LSAMP-206ENST00000498645 ECM29Q5VYK3 1845 aa13.97□□□□□ -0.17
LSAMP-206ENST00000498645 F8W031 263 aaPredicted RBP13.97□□□□□ -0.17
LSAMP-206ENST00000498645 NF2P35240 595 aa13.97□□□□□ -0.17
LSAMP-206ENST00000498645 FKBP1BP68106 108 aa13.97□□□□□ -0.17
LSAMP-206ENST00000498645 PRKG1Q13976 671 aa13.97□□□□□ -0.17
LSAMP-206ENST00000498645 LDHAL6AQ6ZMR3 332 aa13.97□□□□□ -0.17
LSAMP-206ENST00000498645 SRCIN1Q9C0H9 1055 aa13.97□□□□□ -0.17
LSAMP-206ENST00000498645 RNF186Q9NXI6 227 aa13.97□□□□□ -0.17
LSAMP-206ENST00000498645 ALDH1L1O75891 902 aa13.96□□□□□ -0.17
LSAMP-206ENST00000498645 MKRN3Q13064 507 aaKnown RBP13.96□□□□□ -0.17
LSAMP-206ENST00000498645 CSRNP1Q96S65 589 aa13.96□□□□□ -0.17
LSAMP-206ENST00000498645 SAGE1Q9NXZ1 904 aa13.96□□□□□ -0.17
LSAMP-206ENST00000498645 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.96□□□□□ -0.17
LSAMP-206ENST00000498645 IRS2Q9Y4H2 1338 aa13.95□□□□□ -0.18
LSAMP-206ENST00000498645 DLGAP5Q15398 846 aa13.95□□□□□ -0.18
LSAMP-206ENST00000498645 APOBEC3FQ8IUX4 373 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms