RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 SNIP1Q8TAD8 396 aaKnown RBP10.54□□□□□ -0.72
PUDP-205ENST00000498474 SPIRE2Q8WWL2 714 aa10.54□□□□□ -0.72
PUDP-205ENST00000498474 PLEKHF1Q96S99 279 aa10.54□□□□□ -0.72
PUDP-205ENST00000498474 SCN7AQ01118 1682 aa10.53□□□□□ -0.72
PUDP-205ENST00000498474 CAMTA2O94983 1202 aa10.53□□□□□ -0.72
PUDP-205ENST00000498474 RASSF7Q02833 373 aa10.53□□□□□ -0.72
PUDP-205ENST00000498474 TTLL12Q14166 644 aaPredicted RBP10.53□□□□□ -0.72
PUDP-205ENST00000498474 PTCRAQ6ISU1 281 aaPredicted RBP10.53□□□□□ -0.72
PUDP-205ENST00000498474 TEX13AQ9BXU3 409 aaPredicted RBP10.53□□□□□ -0.72
PUDP-205ENST00000498474 GMPR2Q9P2T1 348 aaKnown RBP10.53□□□□□ -0.72
PUDP-205ENST00000498474 BCORQ6W2J9 1755 aa10.52□□□□□ -0.72
PUDP-205ENST00000498474 A0A087WZG4 1122 aa10.52□□□□□ -0.73
PUDP-205ENST00000498474 IL6STP40189 918 aaPredicted RBP10.52□□□□□ -0.73
PUDP-205ENST00000498474 TAF7Q15545 349 aaPredicted RBP10.52□□□□□ -0.73
PUDP-205ENST00000498474 C9orf131Q5VYM1 1079 aa10.52□□□□□ -0.73
PUDP-205ENST00000498474 NBPF10Q6P3W6 841 aaKnown RBP10.52□□□□□ -0.73
PUDP-205ENST00000498474 RETREG3Q86VR2 466 aa10.52□□□□□ -0.73
PUDP-205ENST00000498474 C2CD5Q86YS7 1000 aa10.52□□□□□ -0.73
PUDP-205ENST00000498474 NGEFQ8N5V2 710 aa10.52□□□□□ -0.73
PUDP-205ENST00000498474 NBPF15Q8N660 670 aa10.52□□□□□ -0.73
PUDP-205ENST00000498474 COL11A2P13942 1736 aaPredicted RBP10.52□□□□□ -0.73
PUDP-205ENST00000498474 KDM3BQ7LBC6 1761 aa10.52□□□□□ -0.73
PUDP-205ENST00000498474 DLEC1Q9Y238 1755 aa10.52□□□□□ -0.73
PUDP-205ENST00000498474 MOXD2PA6NHM9 499 aa10.51□□□□□ -0.73
PUDP-205ENST00000498474 FAM177BA6PVY3 158 aa10.51□□□□□ -0.73
PUDP-205ENST00000498474 C6orf229H3BNL8 230 aa10.51□□□□□ -0.73
PUDP-205ENST00000498474 SNRPA1P09661 255 aaKnown RBP10.51□□□□□ -0.73
PUDP-205ENST00000498474 PRELPP51888 382 aa10.51□□□□□ -0.73
PUDP-205ENST00000498474 NFE2L2Q16236 605 aa10.51□□□□□ -0.73
PUDP-205ENST00000498474 PRR5LQ6MZQ0 368 aa10.51□□□□□ -0.73
PUDP-205ENST00000498474 DZIP3Q86Y13 1208 aaKnown RBP10.51□□□□□ -0.73
PUDP-205ENST00000498474 CCDC146Q8IYE0 955 aa10.51□□□□□ -0.73
PUDP-205ENST00000498474 HTATSF1O43719 755 aaKnown RBP10.5□□□□□ -0.73
PUDP-205ENST00000498474 AMHR2Q16671 573 aa10.5□□□□□ -0.73
PUDP-205ENST00000498474 GIGYF2Q6Y7W6 1299 aaKnown RBP10.5□□□□□ -0.73
PUDP-205ENST00000498474 NPM2Q86SE8 214 aaKnown RBP10.5□□□□□ -0.73
PUDP-205ENST00000498474 ZNF622Q969S3 477 aaKnown RBP eCLIP10.5□□□□□ -0.73
PUDP-205ENST00000498474 NMRK2Q9NPI5 230 aa10.5□□□□□ -0.73
PUDP-205ENST00000498474 RNF181Q9P0P0 153 aa10.5□□□□□ -0.73
PUDP-205ENST00000498474 RRP7AQ9Y3A4 280 aaKnown RBP10.5□□□□□ -0.73
PUDP-205ENST00000498474 H0YIN7 160 aa10.49□□□□□ -0.73
PUDP-205ENST00000498474 NEFMP07197 916 aa10.49□□□□□ -0.73
PUDP-205ENST00000498474 SMCPP49901 116 aaPredicted RBP10.49□□□□□ -0.73
PUDP-205ENST00000498474 NEUROD2Q15784 382 aa10.49□□□□□ -0.73
PUDP-205ENST00000498474 HLFQ16534 295 aa10.49□□□□□ -0.73
PUDP-205ENST00000498474 CTC1Q2NKJ3 1217 aa10.49□□□□□ -0.73
PUDP-205ENST00000498474 SETDB2Q96T68 719 aa10.49□□□□□ -0.73
PUDP-205ENST00000498474 NUDT12Q9BQG2 462 aa10.49□□□□□ -0.73
PUDP-205ENST00000498474 MAPK8IP3Q9UPT6 1336 aa10.49□□□□□ -0.73
PUDP-205ENST00000498474 SLX4Q8IY92 1834 aa10.49□□□□□ -0.73
PUDP-205ENST00000498474 LAMB4A4D0S4 1761 aa10.48□□□□□ -0.73
PUDP-205ENST00000498474 NPHP1O15259 732 aa10.48□□□□□ -0.73
PUDP-205ENST00000498474 RIPK4P57078 832 aa10.48□□□□□ -0.73
PUDP-205ENST00000498474 EIF4A1P60842 406 aaKnown RBP10.48□□□□□ -0.73
PUDP-205ENST00000498474 RALBP1Q15311 655 aa10.48□□□□□ -0.73
PUDP-205ENST00000498474 TTLL6Q8N841 843 aa10.48□□□□□ -0.73
PUDP-205ENST00000498474 HPS1Q92902 700 aa10.48□□□□□ -0.73
PUDP-205ENST00000498474 NUP98P52948 1817 aa10.48□□□□□ -0.73
PUDP-205ENST00000498474 PCNTO95613 3336 aa10.48□□□□□ -0.73
PUDP-205ENST00000498474 C21orf2O43822 256 aa10.47□□□□□ -0.73
PUDP-205ENST00000498474 MYL6BP14649 208 aa10.47□□□□□ -0.73
PUDP-205ENST00000498474 TTLL7Q6ZT98 887 aa10.47□□□□□ -0.73
PUDP-205ENST00000498474 CNBD1Q8NA66 436 aa10.47□□□□□ -0.73
PUDP-205ENST00000498474 NFKBIEO00221 500 aa10.46□□□□□ -0.73
PUDP-205ENST00000498474 ANXA1P04083 346 aa10.46□□□□□ -0.73
PUDP-205ENST00000498474 TMPOP42166 694 aaKnown RBP10.46□□□□□ -0.73
PUDP-205ENST00000498474 WNT7BP56706 349 aa10.46□□□□□ -0.73
PUDP-205ENST00000498474 NBPF5PQ86XG9 351 aaPredicted RBP10.46□□□□□ -0.73
PUDP-205ENST00000498474 BEGAINQ9BUH8 593 aa10.46□□□□□ -0.73
PUDP-205ENST00000498474 BRIP1Q9BX63 1249 aa10.46□□□□□ -0.73
PUDP-205ENST00000498474 RRAGCQ9HB90 399 aa10.46□□□□□ -0.73
PUDP-205ENST00000498474 TSPYL4Q9UJ04 414 aa10.46□□□□□ -0.73
PUDP-205ENST00000498474 NIP7Q9Y221 180 aaKnown RBP eCLIP10.46□□□□□ -0.73
PUDP-205ENST00000498474 FER1L6Q2WGJ9 1857 aa10.45□□□□□ -0.74
PUDP-205ENST00000498474 MYBBP1AQ9BQG0 1328 aaKnown RBP10.45□□□□□ -0.74
PUDP-205ENST00000498474 EIF2S2P20042 333 aaKnown RBP10.45□□□□□ -0.74
PUDP-205ENST00000498474 PDE6BP35913 854 aa10.45□□□□□ -0.74
PUDP-205ENST00000498474 ST5P78524 1137 aa10.45□□□□□ -0.74
PUDP-205ENST00000498474 KRT24Q2M2I5 525 aa10.45□□□□□ -0.74
PUDP-205ENST00000498474 OLFM4Q6UX06 510 aa10.45□□□□□ -0.74
PUDP-205ENST00000498474 TIAM2Q8IVF5 1701 aa10.44□□□□□ -0.74
PUDP-205ENST00000498474 MS4A1P11836 297 aa10.44□□□□□ -0.74
PUDP-205ENST00000498474 HSPA6P17066 643 aa10.44□□□□□ -0.74
PUDP-205ENST00000498474 GPTP24298 496 aa10.44□□□□□ -0.74
PUDP-205ENST00000498474 PARP9Q8IXQ6 854 aa10.44□□□□□ -0.74
PUDP-205ENST00000498474 PNISRQ8TF01 805 aaKnown RBP10.44□□□□□ -0.74
PUDP-205ENST00000498474 ZNF428Q96B54 188 aa10.44□□□□□ -0.74
PUDP-205ENST00000498474 PNNQ9H307 717 aaKnown RBP10.44□□□□□ -0.74
PUDP-205ENST00000498474 ZBTB3Q9H5J0 574 aa10.44□□□□□ -0.74
PUDP-205ENST00000498474 ADAMTS8Q9UP79 889 aa10.44□□□□□ -0.74
PUDP-205ENST00000498474 LAS1LQ9Y4W2 734 aaKnown RBP10.44□□□□□ -0.74
PUDP-205ENST00000498474 TNRC6CQ9HCJ0 1690 aaKnown RBP10.44□□□□□ -0.74
PUDP-205ENST00000498474 DICER1Q9UPY3 1922 aaKnown RBP10.43□□□□□ -0.74
PUDP-205ENST00000498474 ALDH1A1P00352 501 aa10.43□□□□□ -0.74
PUDP-205ENST00000498474 SRGNP10124 158 aa10.43□□□□□ -0.74
PUDP-205ENST00000498474 LMNB1P20700 586 aa10.43□□□□□ -0.74
PUDP-205ENST00000498474 HTRA3P83110 453 aa10.43□□□□□ -0.74
PUDP-205ENST00000498474 PROSER3Q2NL68 480 aa10.43□□□□□ -0.74
PUDP-205ENST00000498474 PRPF40BQ6NWY9 871 aaKnown RBP10.43□□□□□ -0.74
PUDP-205ENST00000498474 CLEC4GQ6UXB4 293 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms