RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 EGFRP00533 1210 aa10.73□□□□□ -0.69
HMGXB4-207ENST00000498212 VEGFBP49765 207 aa10.73□□□□□ -0.69
HMGXB4-207ENST00000498212 TBC1D10BQ4KMP7 808 aaPredicted RBP10.73□□□□□ -0.69
HMGXB4-207ENST00000498212 CST9Q5W186 159 aa10.73□□□□□ -0.69
HMGXB4-207ENST00000498212 RSBN1LQ6PCB5 846 aaPredicted RBP10.73□□□□□ -0.69
HMGXB4-207ENST00000498212 LMBR1LQ6UX01 489 aa10.73□□□□□ -0.69
HMGXB4-207ENST00000498212 CDC37L1Q7L3B6 337 aa10.73□□□□□ -0.69
HMGXB4-207ENST00000498212 AGBL3Q8NEM8 1001 aa10.73□□□□□ -0.69
HMGXB4-207ENST00000498212 GLIS2Q9BZE0 524 aaPredicted RBP10.73□□□□□ -0.69
HMGXB4-207ENST00000498212 ZNF804BA4D1E1 1349 aa10.73□□□□□ -0.69
HMGXB4-207ENST00000498212 PTPRCP08575 1304 aa10.73□□□□□ -0.69
HMGXB4-207ENST00000498212 USP17L3A6NCW0 530 aa10.72□□□□□ -0.69
HMGXB4-207ENST00000498212 USP17L4A6NCW7 530 aa10.72□□□□□ -0.69
HMGXB4-207ENST00000498212 CHRNDQ07001 517 aa10.72□□□□□ -0.69
HMGXB4-207ENST00000498212 CCDC57Q2TAC2 916 aa10.72□□□□□ -0.69
HMGXB4-207ENST00000498212 KIF4BQ2VIQ3 1234 aa10.72□□□□□ -0.69
HMGXB4-207ENST00000498212 RBM26Q5T8P6 1007 aaKnown RBP10.72□□□□□ -0.69
HMGXB4-207ENST00000498212 USP17L1Q7RTZ2 530 aa10.72□□□□□ -0.69
HMGXB4-207ENST00000498212 PIP4P2Q8N4L2 257 aa10.72□□□□□ -0.69
HMGXB4-207ENST00000498212 CDCA7LQ96GN5 454 aa10.72□□□□□ -0.69
HMGXB4-207ENST00000498212 COA1Q9GZY4 146 aa10.72□□□□□ -0.69
HMGXB4-207ENST00000498212 CELF2O95319 508 aaKnown RBP10.71□□□□□ -0.69
HMGXB4-207ENST00000498212 KCNJ4P48050 445 aa10.71□□□□□ -0.69
HMGXB4-207ENST00000498212 ALDH1L2Q3SY69 923 aa10.71□□□□□ -0.69
HMGXB4-207ENST00000498212 TAF7LQ5H9L4 462 aa10.71□□□□□ -0.69
HMGXB4-207ENST00000498212 EPHA10Q5JZY3 1008 aa10.71□□□□□ -0.69
HMGXB4-207ENST00000498212 IFFO2Q5TF58 517 aa10.71□□□□□ -0.69
HMGXB4-207ENST00000498212 TXNRD3Q86VQ6 643 aa10.71□□□□□ -0.69
HMGXB4-207ENST00000498212 SSH1Q8WYL5 1049 aa10.71□□□□□ -0.69
HMGXB4-207ENST00000498212 DCPSQ96C86 337 aaKnown RBP10.71□□□□□ -0.69
HMGXB4-207ENST00000498212 WDR33Q9C0J8 1336 aaKnown RBP10.71□□□□□ -0.69
HMGXB4-207ENST00000498212 ZNF408Q9H9D4 720 aa10.71□□□□□ -0.69
HMGXB4-207ENST00000498212 TLL2Q9Y6L7 1015 aa10.71□□□□□ -0.69
HMGXB4-207ENST00000498212 UTYO14607 1347 aa10.7□□□□□ -0.7
HMGXB4-207ENST00000498212 NBPF7P0C2Y1 421 aaPredicted RBP10.7□□□□□ -0.7
HMGXB4-207ENST00000498212 KLRK1P26718 216 aa10.7□□□□□ -0.7
HMGXB4-207ENST00000498212 ECE1P42892 770 aa10.7□□□□□ -0.7
HMGXB4-207ENST00000498212 ZNF280AP59817 542 aaPredicted RBP10.7□□□□□ -0.7
HMGXB4-207ENST00000498212 LDHAL6AQ6ZMR3 332 aa10.7□□□□□ -0.7
HMGXB4-207ENST00000498212 PAXIP1Q6ZW49 1069 aaPredicted RBP10.7□□□□□ -0.7
HMGXB4-207ENST00000498212 KRT26Q7Z3Y9 468 aa10.7□□□□□ -0.7
HMGXB4-207ENST00000498212 USP48Q86UV5 1035 aa10.7□□□□□ -0.7
HMGXB4-207ENST00000498212 TRMT2AQ8IZ69 625 aaKnown RBP10.7□□□□□ -0.7
HMGXB4-207ENST00000498212 FBXW7Q969H0 707 aa10.7□□□□□ -0.7
HMGXB4-207ENST00000498212 SUCLG2Q96I99 432 aa10.7□□□□□ -0.7
HMGXB4-207ENST00000498212 GMLQ99445 158 aa10.7□□□□□ -0.7
HMGXB4-207ENST00000498212 MYH13Q9UKX3 1938 aa10.7□□□□□ -0.7
HMGXB4-207ENST00000498212 ARAP2Q8WZ64 1704 aa10.7□□□□□ -0.7
HMGXB4-207ENST00000498212 PCNTO95613 3336 aa10.69□□□□□ -0.7
HMGXB4-207ENST00000498212 MYO3BQ8WXR4 1341 aa10.69□□□□□ -0.7
HMGXB4-207ENST00000498212 TAF5LO75529 589 aa10.69□□□□□ -0.7
HMGXB4-207ENST00000498212 USP17L8P0C7I0 530 aa10.69□□□□□ -0.7
HMGXB4-207ENST00000498212 DACT2Q5SW24 774 aa10.69□□□□□ -0.7
HMGXB4-207ENST00000498212 COL13A1Q5TAT6 717 aaPredicted RBP10.69□□□□□ -0.7
HMGXB4-207ENST00000498212 STRIP1Q5VSL9 837 aa10.69□□□□□ -0.7
HMGXB4-207ENST00000498212 CYP4F22Q6NT55 531 aa10.69□□□□□ -0.7
HMGXB4-207ENST00000498212 SAPCD2Q86UD0 394 aa10.69□□□□□ -0.7
HMGXB4-207ENST00000498212 HELBQ8NG08 1087 aaPredicted RBP10.69□□□□□ -0.7
HMGXB4-207ENST00000498212 KAZALD1Q96I82 304 aa10.69□□□□□ -0.7
HMGXB4-207ENST00000498212 ZNF594Q96JF6 807 aaPredicted RBP10.69□□□□□ -0.7
HMGXB4-207ENST00000498212 CAPNS2Q96L46 248 aa10.69□□□□□ -0.7
HMGXB4-207ENST00000498212 MYOZ2Q9NPC6 264 aa10.69□□□□□ -0.7
HMGXB4-207ENST00000498212 SMC4Q9NTJ3 1288 aa10.69□□□□□ -0.7
HMGXB4-207ENST00000498212 GGA3Q9NZ52 723 aa10.69□□□□□ -0.7
HMGXB4-207ENST00000498212 IRS2Q9Y4H2 1338 aa10.68□□□□□ -0.7
HMGXB4-207ENST00000498212 ADM5C9JUS6 153 aa10.68□□□□□ -0.7
HMGXB4-207ENST00000498212 SNAP23O00161 211 aa10.68□□□□□ -0.7
HMGXB4-207ENST00000498212 CT47B1P0C2W7 299 aaPredicted RBP10.68□□□□□ -0.7
HMGXB4-207ENST00000498212 GRM1Q13255 1194 aa10.68□□□□□ -0.7
HMGXB4-207ENST00000498212 SCARF1Q14162 830 aa10.68□□□□□ -0.7
HMGXB4-207ENST00000498212 TTLL5Q6EMB2 1281 aa10.68□□□□□ -0.7
HMGXB4-207ENST00000498212 C15orf52Q6ZUT6 534 aaKnown RBP10.68□□□□□ -0.7
HMGXB4-207ENST00000498212 SULF1Q8IWU6 871 aa10.68□□□□□ -0.7
HMGXB4-207ENST00000498212 AIDAQ96BJ3 306 aa10.68□□□□□ -0.7
HMGXB4-207ENST00000498212 HHIPL1Q96JK4 782 aa10.68□□□□□ -0.7
HMGXB4-207ENST00000498212 MXD3Q9BW11 206 aa10.68□□□□□ -0.7
HMGXB4-207ENST00000498212 BICC1Q9H694 974 aaKnown RBP10.68□□□□□ -0.7
HMGXB4-207ENST00000498212 CD209Q9NNX6 404 aa10.68□□□□□ -0.7
HMGXB4-207ENST00000498212 CNNM1Q9NRU3 951 aa10.68□□□□□ -0.7
HMGXB4-207ENST00000498212 ASTN2O75129 1339 aaPredicted RBP10.67□□□□□ -0.7
HMGXB4-207ENST00000498212 AKAP11Q9UKA4 1901 aa10.67□□□□□ -0.7
HMGXB4-207ENST00000498212 FOXN1O15353 648 aa10.67□□□□□ -0.7
HMGXB4-207ENST00000498212 PLIN1O60240 522 aa10.67□□□□□ -0.7
HMGXB4-207ENST00000498212 GTF2IP78347 998 aa10.67□□□□□ -0.7
HMGXB4-207ENST00000498212 MAP2K1Q02750 393 aaPredicted RBP10.67□□□□□ -0.7
HMGXB4-207ENST00000498212 RABL6Q3YEC7 729 aaPredicted RBP10.67□□□□□ -0.7
HMGXB4-207ENST00000498212 ANGEL2Q5VTE6 544 aaKnown RBP10.67□□□□□ -0.7
HMGXB4-207ENST00000498212 DLK2Q6UY11 383 aa10.67□□□□□ -0.7
HMGXB4-207ENST00000498212 ZNF804AQ7Z570 1209 aa10.67□□□□□ -0.7
HMGXB4-207ENST00000498212 OGFOD1Q8N543 542 aa10.67□□□□□ -0.7
HMGXB4-207ENST00000498212 WBP1LQ9NX94 342 aa10.67□□□□□ -0.7
HMGXB4-207ENST00000498212 PITPNM2Q9BZ72 1349 aa10.66□□□□□ -0.7
HMGXB4-207ENST00000498212 PITPNM1O00562 1244 aa10.66□□□□□ -0.7
HMGXB4-207ENST00000498212 ZBTB22O15209 634 aa10.66□□□□□ -0.7
HMGXB4-207ENST00000498212 MMP14P50281 582 aa10.66□□□□□ -0.7
HMGXB4-207ENST00000498212 PUS3Q9BZE2 481 aaKnown RBP10.66□□□□□ -0.7
HMGXB4-207ENST00000498212 USP44Q9H0E7 712 aa10.66□□□□□ -0.7
HMGXB4-207ENST00000498212 GBA2Q9HCG7 927 aaPredicted RBP10.66□□□□□ -0.7
HMGXB4-207ENST00000498212 PAPPA2Q9BXP8 1791 aa10.66□□□□□ -0.7
HMGXB4-207ENST00000498212 IL1R1P14778 569 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms