RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 BICC1Q9H694 974 aaKnown RBP19.27■□□□□ 0.68
NUP50-219ENST00000497960 MKRN1Q9UHC7 482 aaKnown RBP19.27■□□□□ 0.68
NUP50-219ENST00000497960 TAF5LO75529 589 aa19.26■□□□□ 0.67
NUP50-219ENST00000497960 CDC37L1Q7L3B6 337 aa19.26■□□□□ 0.67
NUP50-219ENST00000497960 FBXW7Q969H0 707 aa19.26■□□□□ 0.67
NUP50-219ENST00000497960 TRAF5O00463 557 aa19.25■□□□□ 0.67
NUP50-219ENST00000497960 PLIN1O60240 522 aa19.25■□□□□ 0.67
NUP50-219ENST00000497960 KLRK1P26718 216 aa19.25■□□□□ 0.67
NUP50-219ENST00000497960 KIF4BQ2VIQ3 1234 aa19.25■□□□□ 0.67
NUP50-219ENST00000497960 RABL6Q3YEC7 729 aaPredicted RBP19.25■□□□□ 0.67
NUP50-219ENST00000497960 ABT1Q9ULW3 272 aaKnown RBP19.25■□□□□ 0.67
NUP50-219ENST00000497960 KIF16BQ96L93 1317 aa19.25■□□□□ 0.67
NUP50-219ENST00000497960 CNTNAP1P78357 1384 aa19.24■□□□□ 0.67
NUP50-219ENST00000497960 USP17L8P0C7I0 530 aa19.24■□□□□ 0.67
NUP50-219ENST00000497960 STRIP1Q5VSL9 837 aa19.24■□□□□ 0.67
NUP50-219ENST00000497960 GLIS2Q9BZE0 524 aaPredicted RBP19.24■□□□□ 0.67
NUP50-219ENST00000497960 ZNF609O15014 1411 aa19.24■□□□□ 0.67
NUP50-219ENST00000497960 EGFRP00533 1210 aa19.23■□□□□ 0.67
NUP50-219ENST00000497960 ZNF280AP59817 542 aaPredicted RBP19.23■□□□□ 0.67
NUP50-219ENST00000497960 FMR1Q06787 632 aaKnown RBP eCLIP19.23■□□□□ 0.67
NUP50-219ENST00000497960 TTLL5Q6EMB2 1281 aa19.23■□□□□ 0.67
NUP50-219ENST00000497960 C15orf52Q6ZUT6 534 aaKnown RBP19.23■□□□□ 0.67
NUP50-219ENST00000497960 ANKRD44Q8N8A2 993 aa19.23■□□□□ 0.67
NUP50-219ENST00000497960 GMLQ99445 158 aa19.23■□□□□ 0.67
NUP50-219ENST00000497960 MYO3BQ8WXR4 1341 aa19.23■□□□□ 0.67
NUP50-219ENST00000497960 SNAP23O00161 211 aa19.22■□□□□ 0.67
NUP50-219ENST00000497960 DEFB115Q30KQ5 88 aa19.22■□□□□ 0.67
NUP50-219ENST00000497960 DACT2Q5SW24 774 aa19.22■□□□□ 0.67
NUP50-219ENST00000497960 ZNF804AQ7Z570 1209 aa19.22■□□□□ 0.67
NUP50-219ENST00000497960 ARHGAP45Q92619 1136 aa19.22■□□□□ 0.67
NUP50-219ENST00000497960 DCPSQ96C86 337 aaKnown RBP19.22■□□□□ 0.67
NUP50-219ENST00000497960 CD209Q9NNX6 404 aa19.22■□□□□ 0.67
NUP50-219ENST00000497960 HDAC5Q9UQL6 1122 aa19.22■□□□□ 0.67
NUP50-219ENST00000497960 IPO8O15397 1037 aaKnown RBP19.21■□□□□ 0.67
NUP50-219ENST00000497960 CELF2O95319 508 aaKnown RBP19.21■□□□□ 0.67
NUP50-219ENST00000497960 UBTFL1P0CB47 393 aaPredicted RBP19.21■□□□□ 0.67
NUP50-219ENST00000497960 KRT26Q7Z3Y9 468 aa19.21■□□□□ 0.67
NUP50-219ENST00000497960 USP48Q86UV5 1035 aa19.21■□□□□ 0.67
NUP50-219ENST00000497960 OGFOD1Q8N543 542 aa19.21■□□□□ 0.67
NUP50-219ENST00000497960 PUS3Q9BZE2 481 aaKnown RBP19.21■□□□□ 0.67
NUP50-219ENST00000497960 MROH5Q6ZUA9 1318 aa19.21■□□□□ 0.67
NUP50-219ENST00000497960 RASSF10A6NK89 507 aa19.2■□□□□ 0.66
NUP50-219ENST00000497960 GTF2IP78347 998 aa19.2■□□□□ 0.66
NUP50-219ENST00000497960 UBE4AQ14139 1066 aa19.2■□□□□ 0.66
NUP50-219ENST00000497960 CST9Q5W186 159 aa19.2■□□□□ 0.66
NUP50-219ENST00000497960 MYOZ2Q9NPC6 264 aa19.2■□□□□ 0.66
NUP50-219ENST00000497960 RIPOR2Q9Y4F9 1068 aa19.2■□□□□ 0.66
NUP50-219ENST00000497960 PSME4Q14997 1843 aa19.2■□□□□ 0.66
NUP50-219ENST00000497960 VEGFBP49765 207 aa19.19■□□□□ 0.66
NUP50-219ENST00000497960 MMP14P50281 582 aa19.19■□□□□ 0.66
NUP50-219ENST00000497960 SULF1Q8IWU6 871 aa19.19■□□□□ 0.66
NUP50-219ENST00000497960 MXD3Q9BW11 206 aa19.19■□□□□ 0.66
NUP50-219ENST00000497960 ZNF408Q9H9D4 720 aa19.19■□□□□ 0.66
NUP50-219ENST00000497960 IRS2Q9Y4H2 1338 aa19.19■□□□□ 0.66
NUP50-219ENST00000497960 SCARF1Q14162 830 aa19.18■□□□□ 0.66
NUP50-219ENST00000497960 METTL24Q5JXM2 366 aa19.18■□□□□ 0.66
NUP50-219ENST00000497960 PAXIP1Q6ZW49 1069 aaPredicted RBP19.18■□□□□ 0.66
NUP50-219ENST00000497960 GGA3Q9NZ52 723 aa19.18■□□□□ 0.66
NUP50-219ENST00000497960 HDAC9Q9UKV0 1011 aa19.18■□□□□ 0.66
NUP50-219ENST00000497960 TRPM7Q96QT4 1865 aa19.18■□□□□ 0.66
NUP50-219ENST00000497960 IL1R1P14778 569 aa19.17■□□□□ 0.66
NUP50-219ENST00000497960 LRRC24Q50LG9 513 aa19.17■□□□□ 0.66
NUP50-219ENST00000497960 FRAT1Q92837 279 aaPredicted RBP19.17■□□□□ 0.66
NUP50-219ENST00000497960 TLL2Q9Y6L7 1015 aa19.17■□□□□ 0.66
NUP50-219ENST00000497960 BCAR3O75815 825 aa19.16■□□□□ 0.66
NUP50-219ENST00000497960 HSPA1AP0DMV8 641 aaKnown RBP19.16■□□□□ 0.66
NUP50-219ENST00000497960 HSPA1BP0DMV9 641 aaKnown RBP19.16■□□□□ 0.66
NUP50-219ENST00000497960 ECE1P42892 770 aa19.16■□□□□ 0.66
NUP50-219ENST00000497960 INTS3Q68E01 1043 aaKnown RBP19.16■□□□□ 0.66
NUP50-219ENST00000497960 KLHDC4Q8TBB5 520 aa19.16■□□□□ 0.66
NUP50-219ENST00000497960 ADM5C9JUS6 153 aa19.15■□□□□ 0.66
NUP50-219ENST00000497960 HIBADHP31937 336 aaKnown RBP19.15■□□□□ 0.66
NUP50-219ENST00000497960 ANGEL2Q5VTE6 544 aaKnown RBP19.15■□□□□ 0.66
NUP50-219ENST00000497960 ATF7IPQ6VMQ6 1270 aa19.15■□□□□ 0.66
NUP50-219ENST00000497960 KIAA0825Q8IV33 1275 aa19.15■□□□□ 0.66
NUP50-219ENST00000497960 ASTN2O75129 1339 aaPredicted RBP19.15■□□□□ 0.66
NUP50-219ENST00000497960 POLR2AP24928 1970 aaKnown RBP19.14■□□□□ 0.65
NUP50-219ENST00000497960 GNAI3P08754 354 aa19.14■□□□□ 0.65
NUP50-219ENST00000497960 GYG1P46976 350 aa19.14■□□□□ 0.65
NUP50-219ENST00000497960 SAPCD2Q86UD0 394 aa19.14■□□□□ 0.65
NUP50-219ENST00000497960 VPS37DQ86XT2 251 aa19.14■□□□□ 0.65
NUP50-219ENST00000497960 LRRFIP2Q9Y608 721 aaKnown RBP19.14■□□□□ 0.65
NUP50-219ENST00000497960 WDR33Q9C0J8 1336 aaKnown RBP19.14■□□□□ 0.65
NUP50-219ENST00000497960 A0A1B0GUL6 1792 aa19.14■□□□□ 0.65
NUP50-219ENST00000497960 EYA2O00167 538 aa19.13■□□□□ 0.65
NUP50-219ENST00000497960 SASH1O94885 1247 aa19.13■□□□□ 0.65
NUP50-219ENST00000497960 PDE8BO95263 885 aa19.13■□□□□ 0.65
NUP50-219ENST00000497960 TRIM27P14373 513 aa19.13■□□□□ 0.65
NUP50-219ENST00000497960 RFX5P48382 616 aaPredicted RBP19.13■□□□□ 0.65
NUP50-219ENST00000497960 DLK2Q6UY11 383 aa19.13■□□□□ 0.65
NUP50-219ENST00000497960 FAM84BQ96KN1 310 aaPredicted RBP19.13■□□□□ 0.65
NUP50-219ENST00000497960 CAPNS2Q96L46 248 aa19.13■□□□□ 0.65
NUP50-219ENST00000497960 MEIS3Q99687 375 aa19.13■□□□□ 0.65
NUP50-219ENST00000497960 PITPNM2Q9BZ72 1349 aa19.13■□□□□ 0.65
NUP50-219ENST00000497960 FKBP1AP62942 108 aaKnown RBP19.12■□□□□ 0.65
NUP50-219ENST00000497960 PTPN12Q05209 780 aaKnown RBP19.12■□□□□ 0.65
NUP50-219ENST00000497960 GRM1Q13255 1194 aa19.12■□□□□ 0.65
NUP50-219ENST00000497960 NBPF9Q3BBW0 867 aa19.12■□□□□ 0.65
NUP50-219ENST00000497960 CAVIN4Q5BKX8 364 aa19.12■□□□□ 0.65
NUP50-219ENST00000497960 ZKSCAN2Q63HK3 967 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms