RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 PI4K2BQ8TCG2 481 aa17.36■□□□□ 0.37
VPS26A-209ENST00000497564 CNNM1Q9NRU3 951 aa17.36■□□□□ 0.37
VPS26A-209ENST00000497564 AKAP2Q9Y2D5 859 aa17.36■□□□□ 0.37
VPS26A-209ENST00000497564 MYH13Q9UKX3 1938 aa17.36■□□□□ 0.37
VPS26A-209ENST00000497564 DDX46Q7L014 1031 aaKnown RBP17.35■□□□□ 0.37
VPS26A-209ENST00000497564 ANKRD18AQ8IVF6 992 aa17.35■□□□□ 0.37
VPS26A-209ENST00000497564 CELF1Q92879 486 aaKnown RBP17.35■□□□□ 0.37
VPS26A-209ENST00000497564 MPHOSPH8Q99549 860 aa17.35■□□□□ 0.37
VPS26A-209ENST00000497564 ECHDC1Q9NTX5 307 aa17.35■□□□□ 0.37
VPS26A-209ENST00000497564 ATP6V0A2Q9Y487 856 aa17.35■□□□□ 0.37
VPS26A-209ENST00000497564 POTECB2RU33 542 aa17.34■□□□□ 0.37
VPS26A-209ENST00000497564 ERC2O15083 957 aa17.34■□□□□ 0.37
VPS26A-209ENST00000497564 GLRX3O76003 335 aaKnown RBP17.34■□□□□ 0.37
VPS26A-209ENST00000497564 IARSP41252 1262 aaKnown RBP17.34■□□□□ 0.37
VPS26A-209ENST00000497564 GRAPQ13588 217 aa17.34■□□□□ 0.37
VPS26A-209ENST00000497564 METTL24Q5JXM2 366 aa17.34■□□□□ 0.37
VPS26A-209ENST00000497564 GRAPLQ8TC17 118 aaPredicted RBP17.34■□□□□ 0.37
VPS26A-209ENST00000497564 PSMD1Q99460 953 aa17.34■□□□□ 0.37
VPS26A-209ENST00000497564 CCDC8Q9H0W5 538 aaPredicted RBP17.34■□□□□ 0.37
VPS26A-209ENST00000497564 BSDC1Q9NW68 430 aaPredicted RBP17.34■□□□□ 0.37
VPS26A-209ENST00000497564 DBNLQ9UJU6 430 aaKnown RBP17.34■□□□□ 0.37
VPS26A-209ENST00000497564 ZNF541Q9H0D2 1346 aa17.33■□□□□ 0.36
VPS26A-209ENST00000497564 DDNO94850 711 aaPredicted RBP17.33■□□□□ 0.36
VPS26A-209ENST00000497564 PDE8BO95263 885 aa17.33■□□□□ 0.36
VPS26A-209ENST00000497564 CC2D2BQ6DHV5 1058 aa17.33■□□□□ 0.36
VPS26A-209ENST00000497564 BCL11AQ9H165 835 aa17.33■□□□□ 0.36
VPS26A-209ENST00000497564 TLR7Q9NYK1 1049 aaKnown RBP17.33■□□□□ 0.36
VPS26A-209ENST00000497564 A0A1B0GUL7 405 aa17.32■□□□□ 0.36
VPS26A-209ENST00000497564 BBOX1O75936 387 aa17.32■□□□□ 0.36
VPS26A-209ENST00000497564 RPS8P62241 208 aaKnown RBP17.32■□□□□ 0.36
VPS26A-209ENST00000497564 LTBP1Q14766 1721 aa17.32■□□□□ 0.36
VPS26A-209ENST00000497564 SDSP20132 328 aa17.31■□□□□ 0.36
VPS26A-209ENST00000497564 FGFR2P21802 821 aa17.31■□□□□ 0.36
VPS26A-209ENST00000497564 ATP2B3Q16720 1220 aa17.31■□□□□ 0.36
VPS26A-209ENST00000497564 TSHZ3Q63HK5 1081 aa17.31■□□□□ 0.36
VPS26A-209ENST00000497564 SP8Q8IXZ3 490 aa17.31■□□□□ 0.36
VPS26A-209ENST00000497564 DBNDD2Q9BQY9 259 aa17.31■□□□□ 0.36
VPS26A-209ENST00000497564 TSHZ2Q9NRE2 1034 aa17.31■□□□□ 0.36
VPS26A-209ENST00000497564 DUOX1Q9NRD9 1551 aa17.31■□□□□ 0.36
VPS26A-209ENST00000497564 WDR90Q96KV7 1748 aa17.3■□□□□ 0.36
VPS26A-209ENST00000497564 TOMM70O94826 608 aa17.3■□□□□ 0.36
VPS26A-209ENST00000497564 ATP5JP18859 108 aa17.3■□□□□ 0.36
VPS26A-209ENST00000497564 PUM3Q15397 648 aaKnown RBP17.3■□□□□ 0.36
VPS26A-209ENST00000497564 MYO5AQ9Y4I1 1855 aaKnown RBP17.3■□□□□ 0.36
VPS26A-209ENST00000497564 DOCK2Q92608 1830 aa17.3■□□□□ 0.36
VPS26A-209ENST00000497564 CDC45O75419 566 aa17.29■□□□□ 0.36
VPS26A-209ENST00000497564 TIMM10P62072 90 aa17.29■□□□□ 0.36
VPS26A-209ENST00000497564 CHRNDQ07001 517 aa17.29■□□□□ 0.36
VPS26A-209ENST00000497564 AOC3Q16853 763 aa17.29■□□□□ 0.36
VPS26A-209ENST00000497564 DPY19L2Q6NUT2 758 aa17.29■□□□□ 0.36
VPS26A-209ENST00000497564 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.29■□□□□ 0.36
VPS26A-209ENST00000497564 FZD9O00144 591 aa17.28■□□□□ 0.36
VPS26A-209ENST00000497564 VEGFAP15692 232 aaPredicted RBP17.28■□□□□ 0.36
VPS26A-209ENST00000497564 DPP8Q6V1X1 898 aaPredicted RBP17.28■□□□□ 0.36
VPS26A-209ENST00000497564 LARGE2Q8N3Y3 721 aa17.28■□□□□ 0.36
VPS26A-209ENST00000497564 LPIN2Q92539 896 aa17.28■□□□□ 0.36
VPS26A-209ENST00000497564 XAGE2Q96GT9 111 aa17.28■□□□□ 0.36
VPS26A-209ENST00000497564 NEUROD6Q96NK8 337 aa17.28■□□□□ 0.36
VPS26A-209ENST00000497564 RTFDC1Q9BY42 306 aaPredicted RBP17.28■□□□□ 0.36
VPS26A-209ENST00000497564 MINPP1Q9UNW1 487 aa17.28■□□□□ 0.36
VPS26A-209ENST00000497564 PPIP5K2O43314 1243 aa17.27■□□□□ 0.36
VPS26A-209ENST00000497564 GRIPAP1Q4V328 841 aa17.27■□□□□ 0.36
VPS26A-209ENST00000497564 TMC4Q7Z404 712 aa17.27■□□□□ 0.36
VPS26A-209ENST00000497564 MPNDQ8N594 471 aa17.27■□□□□ 0.36
VPS26A-209ENST00000497564 ZNF512BQ96KM6 892 aaPredicted RBP17.27■□□□□ 0.36
VPS26A-209ENST00000497564 ANKRD2Q9GZV1 360 aa17.27■□□□□ 0.36
VPS26A-209ENST00000497564 EIF5BO60841 1220 aaKnown RBP17.26■□□□□ 0.35
VPS26A-209ENST00000497564 POTEIP0CG38 1075 aa17.26■□□□□ 0.35
VPS26A-209ENST00000497564 POTEJP0CG39 1038 aa17.26■□□□□ 0.35
VPS26A-209ENST00000497564 SLC5A1P13866 664 aa17.26■□□□□ 0.35
VPS26A-209ENST00000497564 GPSM2P81274 684 aa17.26■□□□□ 0.35
VPS26A-209ENST00000497564 UBE4AQ14139 1066 aa17.26■□□□□ 0.35
VPS26A-209ENST00000497564 TBC1D9Q6ZT07 1266 aa17.26■□□□□ 0.35
VPS26A-209ENST00000497564 CNTROBQ8N137 903 aa17.26■□□□□ 0.35
VPS26A-209ENST00000497564 RBM46Q8TBY0 533 aaKnown RBP17.26■□□□□ 0.35
VPS26A-209ENST00000497564 JDP2Q8WYK2 163 aa17.26■□□□□ 0.35
VPS26A-209ENST00000497564 GPR101Q96P66 508 aaPredicted RBP17.26■□□□□ 0.35
VPS26A-209ENST00000497564 TMX4Q9H1E5 349 aaPredicted RBP17.26■□□□□ 0.35
VPS26A-209ENST00000497564 TRIM6-TRIM34B2RNG4 842 aa17.25■□□□□ 0.35
VPS26A-209ENST00000497564 ADORA1P30542 326 aa17.25■□□□□ 0.35
VPS26A-209ENST00000497564 CCDC158Q5M9N0 1113 aa17.25■□□□□ 0.35
VPS26A-209ENST00000497564 TICAM2Q86XR7 235 aa17.25■□□□□ 0.35
VPS26A-209ENST00000497564 HELBQ8NG08 1087 aaPredicted RBP17.25■□□□□ 0.35
VPS26A-209ENST00000497564 EVI5LQ96CN4 794 aa17.25■□□□□ 0.35
VPS26A-209ENST00000497564 HAUS7Q99871 368 aa17.25■□□□□ 0.35
VPS26A-209ENST00000497564 RFX7Q2KHR2 1363 aa17.25■□□□□ 0.35
VPS26A-209ENST00000497564 TAF5LO75529 589 aa17.24■□□□□ 0.35
VPS26A-209ENST00000497564 IFIT1P09914 478 aaKnown RBP17.24■□□□□ 0.35
VPS26A-209ENST00000497564 HSPA6P17066 643 aa17.24■□□□□ 0.35
VPS26A-209ENST00000497564 L3MBTL3Q96JM7 780 aaPredicted RBP17.24■□□□□ 0.35
VPS26A-209ENST00000497564 POLLQ9UGP5 575 aa17.24■□□□□ 0.35
VPS26A-209ENST00000497564 NSFL1CQ9UNZ2 370 aaKnown RBP17.24■□□□□ 0.35
VPS26A-209ENST00000497564 ZBTB22O15209 634 aa17.23■□□□□ 0.35
VPS26A-209ENST00000497564 KIAA2012Q0VF49 1180 aa17.23■□□□□ 0.35
VPS26A-209ENST00000497564 GORABQ5T7V8 394 aa17.23■□□□□ 0.35
VPS26A-209ENST00000497564 CASC1Q6TDU7 716 aa17.23■□□□□ 0.35
VPS26A-209ENST00000497564 NIM1KQ8IY84 436 aa17.23■□□□□ 0.35
VPS26A-209ENST00000497564 RILPL2Q969X0 211 aa17.23■□□□□ 0.35
VPS26A-209ENST00000497564 BOLA2Q9H3K6 86 aa17.23■□□□□ 0.35
VPS26A-209ENST00000497564 GJA3Q9Y6H8 435 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms