RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 ALKBH2Q6NS38 261 aa9.28□□□□□ -0.92
MSH5-219ENST00000497269 PIK3R5Q8WYR1 880 aa9.28□□□□□ -0.92
MSH5-219ENST00000497269 PNMA5Q96PV4 448 aa9.28□□□□□ -0.92
MSH5-219ENST00000497269 IGFLR1Q9H665 355 aa9.28□□□□□ -0.92
MSH5-219ENST00000497269 PLXNC1O60486 1568 aa9.28□□□□□ -0.92
MSH5-219ENST00000497269 CAMSAP2Q08AD1 1489 aa9.28□□□□□ -0.92
MSH5-219ENST00000497269 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.27□□□□□ -0.93
MSH5-219ENST00000497269 ADGBQ8N7X0 1667 aa9.27□□□□□ -0.93
MSH5-219ENST00000497269 FZD6O60353 706 aa9.27□□□□□ -0.93
MSH5-219ENST00000497269 XYLBO75191 536 aa9.27□□□□□ -0.93
MSH5-219ENST00000497269 TSPY4P0CV99 314 aa9.27□□□□□ -0.93
MSH5-219ENST00000497269 TSPY10P0CW01 314 aa9.27□□□□□ -0.93
MSH5-219ENST00000497269 PCBP4P57723 403 aaKnown RBP9.27□□□□□ -0.93
MSH5-219ENST00000497269 ARHGAP4P98171 946 aa9.27□□□□□ -0.93
MSH5-219ENST00000497269 TRIP4Q15650 581 aaPredicted RBP9.27□□□□□ -0.93
MSH5-219ENST00000497269 ECM1Q16610 540 aa9.27□□□□□ -0.93
MSH5-219ENST00000497269 FAM13BQ9NYF5 915 aa9.27□□□□□ -0.93
MSH5-219ENST00000497269 BRPF3Q9ULD4 1205 aa9.27□□□□□ -0.93
MSH5-219ENST00000497269 CEP170BQ9Y4F5 1589 aaPredicted RBP9.27□□□□□ -0.93
MSH5-219ENST00000497269 SASH3O75995 380 aa9.26□□□□□ -0.93
MSH5-219ENST00000497269 ADAMTS2O95450 1211 aa9.26□□□□□ -0.93
MSH5-219ENST00000497269 PDGFAP04085 211 aa9.26□□□□□ -0.93
MSH5-219ENST00000497269 NPR3P17342 541 aa9.26□□□□□ -0.93
MSH5-219ENST00000497269 LAMC2Q13753 1193 aa9.26□□□□□ -0.93
MSH5-219ENST00000497269 TMC1Q8TDI8 760 aa9.26□□□□□ -0.93
MSH5-219ENST00000497269 KCNMB2Q9Y691 235 aa9.26□□□□□ -0.93
MSH5-219ENST00000497269 TNRQ92752 1358 aa9.25□□□□□ -0.93
MSH5-219ENST00000497269 CFAP65Q6ZU64 1925 aaKnown RBP9.25□□□□□ -0.93
MSH5-219ENST00000497269 NFKB1P19838 968 aa9.25□□□□□ -0.93
MSH5-219ENST00000497269 TARSP26639 723 aaKnown RBP9.25□□□□□ -0.93
MSH5-219ENST00000497269 KCNQ4P56696 695 aa9.25□□□□□ -0.93
MSH5-219ENST00000497269 CCINQ13939 588 aa9.25□□□□□ -0.93
MSH5-219ENST00000497269 TTC16Q8NEE8 873 aa9.25□□□□□ -0.93
MSH5-219ENST00000497269 NSFL1CQ9UNZ2 370 aaKnown RBP9.25□□□□□ -0.93
MSH5-219ENST00000497269 DNMT1P26358 1616 aaKnown RBP9.24□□□□□ -0.93
MSH5-219ENST00000497269 CCDC141Q6ZP82 1450 aa9.24□□□□□ -0.93
MSH5-219ENST00000497269 PCSK2P16519 638 aa9.24□□□□□ -0.93
MSH5-219ENST00000497269 MAPK1P28482 360 aa9.24□□□□□ -0.93
MSH5-219ENST00000497269 SYT9Q86SS6 491 aa9.24□□□□□ -0.93
MSH5-219ENST00000497269 GSX2Q9BZM3 304 aa9.24□□□□□ -0.93
MSH5-219ENST00000497269 GGNBP2Q9H3C7 697 aa9.24□□□□□ -0.93
MSH5-219ENST00000497269 RTEL1-TNFRSF6BF6WH68 1400 aa9.23□□□□□ -0.93
MSH5-219ENST00000497269 A2ML1A8K2U0 1454 aa9.23□□□□□ -0.93
MSH5-219ENST00000497269 NEURL1BA8MQ27 555 aa9.23□□□□□ -0.93
MSH5-219ENST00000497269 NDUFB5O43674 189 aa9.23□□□□□ -0.93
MSH5-219ENST00000497269 RARAP10276 462 aa9.23□□□□□ -0.93
MSH5-219ENST00000497269 MZF1P28698 734 aaPredicted RBP9.23□□□□□ -0.93
MSH5-219ENST00000497269 HSPA1LP34931 641 aa9.23□□□□□ -0.93
MSH5-219ENST00000497269 ANKLE2Q86XL3 938 aa9.23□□□□□ -0.93
MSH5-219ENST00000497269 RRP7BPQ9NSQ0 103 aa9.23□□□□□ -0.93
MSH5-219ENST00000497269 TCOF1Q13428 1488 aaKnown RBP9.22□□□□□ -0.93
MSH5-219ENST00000497269 SPATA31D1Q6ZQQ2 1576 aa9.22□□□□□ -0.93
MSH5-219ENST00000497269 MAP2K3P46734 347 aa9.22□□□□□ -0.93
MSH5-219ENST00000497269 SRSF11Q05519 484 aaKnown RBP9.22□□□□□ -0.93
MSH5-219ENST00000497269 FAM182BQ5T319 152 aa9.22□□□□□ -0.93
MSH5-219ENST00000497269 LCE2AQ5TA79 106 aaPredicted RBP9.22□□□□□ -0.93
MSH5-219ENST00000497269 SND1Q7KZF4 910 aaKnown RBP eCLIP9.22□□□□□ -0.93
MSH5-219ENST00000497269 THEMISQ8N1K5 641 aaPredicted RBP9.22□□□□□ -0.93
MSH5-219ENST00000497269 GGA1Q9UJY5 639 aa9.22□□□□□ -0.93
MSH5-219ENST00000497269 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.22□□□□□ -0.93
MSH5-219ENST00000497269 ZNF142P52746 1687 aaPredicted RBP9.22□□□□□ -0.93
MSH5-219ENST00000497269 LRRC9Q6ZRR7 1453 aa9.21□□□□□ -0.93
MSH5-219ENST00000497269 NEUROD1Q13562 356 aa9.21□□□□□ -0.94
MSH5-219ENST00000497269 ZNF438Q7Z4V0 828 aa9.21□□□□□ -0.94
MSH5-219ENST00000497269 OXCT2Q9BYC2 517 aaPredicted RBP9.21□□□□□ -0.94
MSH5-219ENST00000497269 ZFATQ9P243 1243 aa9.21□□□□□ -0.94
MSH5-219ENST00000497269 FNDC3AQ9Y2H6 1198 aaKnown RBP9.21□□□□□ -0.94
MSH5-219ENST00000497269 MIA2Q96PC5 1412 aa9.21□□□□□ -0.94
MSH5-219ENST00000497269 PLA2R1Q13018 1463 aa9.21□□□□□ -0.94
MSH5-219ENST00000497269 MLLT1Q03111 559 aaPredicted RBP9.2□□□□□ -0.94
MSH5-219ENST00000497269 ZNF468Q5VIY5 522 aaPredicted RBP9.2□□□□□ -0.94
MSH5-219ENST00000497269 WHAMMQ8TF30 809 aa9.2□□□□□ -0.94
MSH5-219ENST00000497269 ACDQ96AP0 544 aa9.2□□□□□ -0.94
MSH5-219ENST00000497269 UBE2OQ9C0C9 1292 aaKnown RBP9.2□□□□□ -0.94
MSH5-219ENST00000497269 TMEM63CQ9P1W3 806 aa9.2□□□□□ -0.94
MSH5-219ENST00000497269 VPS8Q8N3P4 1428 aa9.2□□□□□ -0.94
MSH5-219ENST00000497269 KDM5DQ9BY66 1539 aa9.2□□□□□ -0.94
MSH5-219ENST00000497269 MARSP56192 900 aaKnown RBP9.19□□□□□ -0.94
MSH5-219ENST00000497269 KLF15Q9UIH9 416 aa9.19□□□□□ -0.94
MSH5-219ENST00000497269 DCTN4Q9UJW0 460 aa9.19□□□□□ -0.94
MSH5-219ENST00000497269 PZPP20742 1482 aa9.19□□□□□ -0.94
MSH5-219ENST00000497269 NEURL4Q96JN8 1562 aa9.19□□□□□ -0.94
MSH5-219ENST00000497269 UGGT1Q9NYU2 1555 aa9.19□□□□□ -0.94
MSH5-219ENST00000497269 TOM1O60784 492 aa9.18□□□□□ -0.94
MSH5-219ENST00000497269 MMP20O60882 483 aa9.18□□□□□ -0.94
MSH5-219ENST00000497269 NPHP4O75161 1426 aaPredicted RBP9.18□□□□□ -0.94
MSH5-219ENST00000497269 POLR1AO95602 1720 aaPredicted RBP9.18□□□□□ -0.94
MSH5-219ENST00000497269 LYPD4Q6UWN0 246 aa9.18□□□□□ -0.94
MSH5-219ENST00000497269 NLRP13Q86W25 1043 aa9.18□□□□□ -0.94
MSH5-219ENST00000497269 ELP3Q9H9T3 547 aa9.18□□□□□ -0.94
MSH5-219ENST00000497269 SHANK2Q9UPX8 1470 aa9.18□□□□□ -0.94
MSH5-219ENST00000497269 CEP152O94986 1710 aa9.17□□□□□ -0.94
MSH5-219ENST00000497269 ARAFP10398 606 aa9.17□□□□□ -0.94
MSH5-219ENST00000497269 ADH6P28332 368 aa9.17□□□□□ -0.94
MSH5-219ENST00000497269 HFE2Q6ZVN8 426 aa9.17□□□□□ -0.94
MSH5-219ENST00000497269 FCHSD1Q86WN1 690 aa9.17□□□□□ -0.94
MSH5-219ENST00000497269 NSUN5Q96P11 429 aaKnown RBP9.17□□□□□ -0.94
MSH5-219ENST00000497269 FOXD3Q9UJU5 478 aaPredicted RBP9.17□□□□□ -0.94
MSH5-219ENST00000497269 ARHGEF5Q12774 1597 aa9.16□□□□□ -0.94
MSH5-219ENST00000497269 FAM135AQ9P2D6 1515 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 304.3 ms