RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 TLR7Q9NYK1 1049 aaKnown RBP17.15■□□□□ 0.34
ATPAF2-208ENST00000496852 POLLQ9UGP5 575 aa17.15■□□□□ 0.34
ATPAF2-208ENST00000496852 DBNLQ9UJU6 430 aaKnown RBP17.15■□□□□ 0.34
ATPAF2-208ENST00000496852 GGA1Q9UJY5 639 aa17.15■□□□□ 0.34
ATPAF2-208ENST00000496852 MYO5AQ9Y4I1 1855 aaKnown RBP17.15■□□□□ 0.34
ATPAF2-208ENST00000496852 IFIT2P09913 472 aaKnown RBP17.14■□□□□ 0.33
ATPAF2-208ENST00000496852 SLC5A1P13866 664 aa17.14■□□□□ 0.33
ATPAF2-208ENST00000496852 DPP8Q6V1X1 898 aaPredicted RBP17.14■□□□□ 0.33
ATPAF2-208ENST00000496852 SKAP1Q86WV1 359 aa17.14■□□□□ 0.33
ATPAF2-208ENST00000496852 XAGE2Q96GT9 111 aa17.14■□□□□ 0.33
ATPAF2-208ENST00000496852 NEUROD6Q96NK8 337 aa17.14■□□□□ 0.33
ATPAF2-208ENST00000496852 DBNDD2Q9BQY9 259 aa17.14■□□□□ 0.33
ATPAF2-208ENST00000496852 UFL1O94874 794 aa17.13■□□□□ 0.33
ATPAF2-208ENST00000496852 IFIT1P09914 478 aaKnown RBP17.13■□□□□ 0.33
ATPAF2-208ENST00000496852 ADORA1P30542 326 aa17.13■□□□□ 0.33
ATPAF2-208ENST00000496852 KCNJ4P48050 445 aa17.13■□□□□ 0.33
ATPAF2-208ENST00000496852 RTFDC1Q9BY42 306 aaPredicted RBP17.13■□□□□ 0.33
ATPAF2-208ENST00000496852 ZNF646O15015 1829 aaPredicted RBP17.13■□□□□ 0.33
ATPAF2-208ENST00000496852 KLRK1P26718 216 aa17.13■□□□□ 0.33
ATPAF2-208ENST00000496852 C15orf52Q6ZUT6 534 aaKnown RBP17.13■□□□□ 0.33
ATPAF2-208ENST00000496852 RTKN2Q8IZC4 609 aa17.13■□□□□ 0.33
ATPAF2-208ENST00000496852 MED23Q9ULK4 1368 aa17.12■□□□□ 0.33
ATPAF2-208ENST00000496852 MYH7P12883 1935 aa17.12■□□□□ 0.33
ATPAF2-208ENST00000496852 GOLGB1Q14789 3259 aaKnown RBP17.12■□□□□ 0.33
ATPAF2-208ENST00000496852 TXNRD3Q86VQ6 643 aa17.12■□□□□ 0.33
ATPAF2-208ENST00000496852 PLEKHM2Q8IWE5 1019 aa17.12■□□□□ 0.33
ATPAF2-208ENST00000496852 SCN9AQ15858 1988 aa17.12■□□□□ 0.33
ATPAF2-208ENST00000496852 C6orf229H3BNL8 230 aa17.11■□□□□ 0.33
ATPAF2-208ENST00000496852 MX1P20591 662 aa17.11■□□□□ 0.33
ATPAF2-208ENST00000496852 GPR101Q96P66 508 aaPredicted RBP17.11■□□□□ 0.33
ATPAF2-208ENST00000496852 PSMD1Q99460 953 aa17.11■□□□□ 0.33
ATPAF2-208ENST00000496852 STAP2Q9UGK3 403 aa17.11■□□□□ 0.33
ATPAF2-208ENST00000496852 PDE1AP54750 535 aa17.1■□□□□ 0.33
ATPAF2-208ENST00000496852 OSBPL3Q9H4L5 887 aa17.1■□□□□ 0.33
ATPAF2-208ENST00000496852 DOCK2Q92608 1830 aa17.1■□□□□ 0.33
ATPAF2-208ENST00000496852 RGS3P49796 1198 aa17.1■□□□□ 0.33
ATPAF2-208ENST00000496852 FKBP4Q02790 459 aaKnown RBP eCLIP17.1■□□□□ 0.33
ATPAF2-208ENST00000496852 SUPT20HQ8NEM7 779 aa17.1■□□□□ 0.33
ATPAF2-208ENST00000496852 FAM84BQ96KN1 310 aaPredicted RBP17.1■□□□□ 0.33
ATPAF2-208ENST00000496852 TTC41PQ6P2S7 1318 aa17.1■□□□□ 0.33
ATPAF2-208ENST00000496852 GYG1P46976 350 aa17.09■□□□□ 0.33
ATPAF2-208ENST00000496852 CCDC102BQ68D86 513 aa17.09■□□□□ 0.33
ATPAF2-208ENST00000496852 FBXO33Q7Z6M2 555 aa17.09■□□□□ 0.33
ATPAF2-208ENST00000496852 PELP1Q8IZL8 1130 aaKnown RBP17.09■□□□□ 0.33
ATPAF2-208ENST00000496852 EYA3Q99504 573 aa17.09■□□□□ 0.33
ATPAF2-208ENST00000496852 ECHDC1Q9NTX5 307 aa17.09■□□□□ 0.33
ATPAF2-208ENST00000496852 SRCAPQ6ZRS2 3230 aa17.09■□□□□ 0.33
ATPAF2-208ENST00000496852 NFKBIEO00221 500 aa17.08■□□□□ 0.32
ATPAF2-208ENST00000496852 YBX3P16989 372 aaKnown RBP eCLIP17.08■□□□□ 0.32
ATPAF2-208ENST00000496852 PHKA1P46020 1223 aa17.08■□□□□ 0.32
ATPAF2-208ENST00000496852 BCAMP50895 628 aa17.08■□□□□ 0.32
ATPAF2-208ENST00000496852 AOX1Q06278 1338 aa17.08■□□□□ 0.32
ATPAF2-208ENST00000496852 CAVIN4Q5BKX8 364 aa17.08■□□□□ 0.32
ATPAF2-208ENST00000496852 CCDC158Q5M9N0 1113 aa17.08■□□□□ 0.32
ATPAF2-208ENST00000496852 GORABQ5T7V8 394 aa17.08■□□□□ 0.32
ATPAF2-208ENST00000496852 LTBP3Q9NS15 1303 aa17.08■□□□□ 0.32
ATPAF2-208ENST00000496852 COL4A5P29400 1685 aa17.08■□□□□ 0.32
ATPAF2-208ENST00000496852 WASHC4Q2M389 1173 aa17.07■□□□□ 0.32
ATPAF2-208ENST00000496852 TSHZ3Q63HK5 1081 aa17.07■□□□□ 0.32
ATPAF2-208ENST00000496852 PI4K2BQ8TCG2 481 aa17.07■□□□□ 0.32
ATPAF2-208ENST00000496852 GPATCH3Q96I76 525 aa17.07■□□□□ 0.32
ATPAF2-208ENST00000496852 ZNF512BQ96KM6 892 aaPredicted RBP17.07■□□□□ 0.32
ATPAF2-208ENST00000496852 RIMBP2O15034 1052 aa17.07■□□□□ 0.32
ATPAF2-208ENST00000496852 ATP5JP18859 108 aa17.07■□□□□ 0.32
ATPAF2-208ENST00000496852 ARID4AP29374 1257 aaPredicted RBP17.07■□□□□ 0.32
ATPAF2-208ENST00000496852 HIBADHP31937 336 aaKnown RBP17.07■□□□□ 0.32
ATPAF2-208ENST00000496852 KIAA2012Q0VF49 1180 aa17.07■□□□□ 0.32
ATPAF2-208ENST00000496852 ZC3H12CQ9C0D7 883 aaKnown RBP17.07■□□□□ 0.32
ATPAF2-208ENST00000496852 TAOK3Q9H2K8 898 aa17.07■□□□□ 0.32
ATPAF2-208ENST00000496852 TIAM2Q8IVF5 1701 aa17.06■□□□□ 0.32
ATPAF2-208ENST00000496852 ZBTB22O15209 634 aa17.06■□□□□ 0.32
ATPAF2-208ENST00000496852 TTC39AQ5SRH9 613 aa17.06■□□□□ 0.32
ATPAF2-208ENST00000496852 ZNF804AQ7Z570 1209 aa17.06■□□□□ 0.32
ATPAF2-208ENST00000496852 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.06■□□□□ 0.32
ATPAF2-208ENST00000496852 VPS33BQ9H267 617 aa17.06■□□□□ 0.32
ATPAF2-208ENST00000496852 ERC2O15083 957 aa17.05■□□□□ 0.32
ATPAF2-208ENST00000496852 UQCRFS1P1P0C7P4 283 aa17.05■□□□□ 0.32
ATPAF2-208ENST00000496852 AOC3Q16853 763 aa17.05■□□□□ 0.32
ATPAF2-208ENST00000496852 COL1A1P02452 1464 aaPredicted RBP17.05■□□□□ 0.32
ATPAF2-208ENST00000496852 GLRX3O76003 335 aaKnown RBP17.04■□□□□ 0.32
ATPAF2-208ENST00000496852 IL1R1P14778 569 aa17.04■□□□□ 0.32
ATPAF2-208ENST00000496852 SCARF1Q14162 830 aa17.04■□□□□ 0.32
ATPAF2-208ENST00000496852 VPS37DQ86XT2 251 aa17.04■□□□□ 0.32
ATPAF2-208ENST00000496852 TDRD7Q8NHU6 1098 aaKnown RBP17.04■□□□□ 0.32
ATPAF2-208ENST00000496852 COA1Q9GZY4 146 aa17.04■□□□□ 0.32
ATPAF2-208ENST00000496852 CD209Q9NNX6 404 aa17.04■□□□□ 0.32
ATPAF2-208ENST00000496852 ZNF277Q9NRM2 450 aaPredicted RBP17.04■□□□□ 0.32
ATPAF2-208ENST00000496852 PPIP5K2O43314 1243 aa17.04■□□□□ 0.32
ATPAF2-208ENST00000496852 IARSP41252 1262 aaKnown RBP17.04■□□□□ 0.32
ATPAF2-208ENST00000496852 MCAMP43121 646 aa17.04■□□□□ 0.32
ATPAF2-208ENST00000496852 RASSF7Q02833 373 aa17.04■□□□□ 0.32
ATPAF2-208ENST00000496852 TTC22Q5TAA0 569 aa17.04■□□□□ 0.32
ATPAF2-208ENST00000496852 GNL3LQ9NVN8 582 aaKnown RBP17.04■□□□□ 0.32
ATPAF2-208ENST00000496852 SEMA3EO15041 775 aa17.03■□□□□ 0.32
ATPAF2-208ENST00000496852 PRELPP51888 382 aa17.03■□□□□ 0.32
ATPAF2-208ENST00000496852 RASGRF1Q13972 1273 aa17.03■□□□□ 0.32
ATPAF2-208ENST00000496852 ARHGAP27Q6ZUM4 889 aa17.03■□□□□ 0.32
ATPAF2-208ENST00000496852 BOLA2Q9H3K6 86 aa17.03■□□□□ 0.32
ATPAF2-208ENST00000496852 IQSEC3Q9UPP2 1182 aaPredicted RBP17.03■□□□□ 0.32
ATPAF2-208ENST00000496852 MAST2Q6P0Q8 1798 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms