RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 WTIPA6NIX2 430 aaPredicted RBP26.76■■□□□ 1.87
C9orf3-222ENST00000496567 NFKBIEO00221 500 aa26.76■■□□□ 1.87
C9orf3-222ENST00000496567 SMARCA5O60264 1052 aaPredicted RBP26.76■■□□□ 1.87
C9orf3-222ENST00000496567 TIMM10P62072 90 aa26.76■■□□□ 1.87
C9orf3-222ENST00000496567 WASHC4Q2M389 1173 aa26.76■■□□□ 1.87
C9orf3-222ENST00000496567 C15orf52Q6ZUT6 534 aaKnown RBP26.76■■□□□ 1.87
C9orf3-222ENST00000496567 NEUROD6Q96NK8 337 aa26.76■■□□□ 1.87
C9orf3-222ENST00000496567 DCAF8L1A6NGE4 600 aa26.75■■□□□ 1.87
C9orf3-222ENST00000496567 ZC3H12CQ9C0D7 883 aaKnown RBP26.75■■□□□ 1.87
C9orf3-222ENST00000496567 MED23Q9ULK4 1368 aa26.75■■□□□ 1.87
C9orf3-222ENST00000496567 NUCB1Q02818 461 aa26.75■■□□□ 1.87
C9orf3-222ENST00000496567 AACSQ86V21 672 aa26.75■■□□□ 1.87
C9orf3-222ENST00000496567 EAF2Q96CJ1 260 aaPredicted RBP26.75■■□□□ 1.87
C9orf3-222ENST00000496567 BCL11AQ9H165 835 aa26.74■■□□□ 1.87
C9orf3-222ENST00000496567 IFIT2P09913 472 aaKnown RBP26.73■■□□□ 1.87
C9orf3-222ENST00000496567 CAVIN4Q5BKX8 364 aa26.73■■□□□ 1.87
C9orf3-222ENST00000496567 CHD1LQ86WJ1 897 aa26.73■■□□□ 1.87
C9orf3-222ENST00000496567 GPR101Q96P66 508 aaPredicted RBP26.73■■□□□ 1.87
C9orf3-222ENST00000496567 KIAA2012Q0VF49 1180 aa26.72■■□□□ 1.87
C9orf3-222ENST00000496567 XAGE2Q96GT9 111 aa26.72■■□□□ 1.87
C9orf3-222ENST00000496567 ZNF277Q9NRM2 450 aaPredicted RBP26.72■■□□□ 1.87
C9orf3-222ENST00000496567 RIMBP2O15034 1052 aa26.71■■□□□ 1.87
C9orf3-222ENST00000496567 PPIP5K2O43314 1243 aa26.71■■□□□ 1.87
C9orf3-222ENST00000496567 RASSF7Q02833 373 aa26.71■■□□□ 1.87
C9orf3-222ENST00000496567 CCDC8Q9H0W5 538 aaPredicted RBP26.71■■□□□ 1.87
C9orf3-222ENST00000496567 IRS2Q9Y4H2 1338 aa26.71■■□□□ 1.87
C9orf3-222ENST00000496567 KLRK1P26718 216 aa26.71■■□□□ 1.87
C9orf3-222ENST00000496567 IARSP41252 1262 aaKnown RBP26.71■■□□□ 1.87
C9orf3-222ENST00000496567 GORABQ5T7V8 394 aa26.71■■□□□ 1.87
C9orf3-222ENST00000496567 ARAP2Q8WZ64 1704 aa26.7■■□□□ 1.87
C9orf3-222ENST00000496567 AOC3Q16853 763 aa26.7■■□□□ 1.86
C9orf3-222ENST00000496567 ZNF804AQ7Z570 1209 aa26.7■■□□□ 1.86
C9orf3-222ENST00000496567 TXNRD3Q86VQ6 643 aa26.7■■□□□ 1.86
C9orf3-222ENST00000496567 VPS37DQ86XT2 251 aa26.7■■□□□ 1.86
C9orf3-222ENST00000496567 LNPKQ9C0E8 428 aa26.7■■□□□ 1.86
C9orf3-222ENST00000496567 G3V3G9 751 aa26.69■■□□□ 1.86
C9orf3-222ENST00000496567 ADORA1P30542 326 aa26.69■■□□□ 1.86
C9orf3-222ENST00000496567 DCAF8Q5TAQ9 597 aa26.69■■□□□ 1.86
C9orf3-222ENST00000496567 LARGE2Q8N3Y3 721 aa26.69■■□□□ 1.86
C9orf3-222ENST00000496567 FAM84BQ96KN1 310 aaPredicted RBP26.69■■□□□ 1.86
C9orf3-222ENST00000496567 DBNDD2Q9BQY9 259 aa26.69■■□□□ 1.86
C9orf3-222ENST00000496567 DBNLQ9UJU6 430 aaKnown RBP26.69■■□□□ 1.86
C9orf3-222ENST00000496567 HIBADHP31937 336 aaKnown RBP26.68■■□□□ 1.86
C9orf3-222ENST00000496567 GYG1P46976 350 aa26.68■■□□□ 1.86
C9orf3-222ENST00000496567 FBXO33Q7Z6M2 555 aa26.68■■□□□ 1.86
C9orf3-222ENST00000496567 COA1Q9GZY4 146 aa26.68■■□□□ 1.86
C9orf3-222ENST00000496567 LMNB1P20700 586 aa26.67■■□□□ 1.86
C9orf3-222ENST00000496567 CCDC158Q5M9N0 1113 aa26.67■■□□□ 1.86
C9orf3-222ENST00000496567 BCAMP50895 628 aa26.67■■□□□ 1.86
C9orf3-222ENST00000496567 GNL3LQ9NVN8 582 aaKnown RBP26.67■■□□□ 1.86
C9orf3-222ENST00000496567 TLR7Q9NYK1 1049 aaKnown RBP26.67■■□□□ 1.86
C9orf3-222ENST00000496567 CCDC102BQ68D86 513 aa26.66■■□□□ 1.86
C9orf3-222ENST00000496567 JDP2Q8WYK2 163 aa26.66■■□□□ 1.86
C9orf3-222ENST00000496567 C16orf71Q8IYS4 520 aaPredicted RBP26.65■■□□□ 1.86
C9orf3-222ENST00000496567 GPATCH3Q96I76 525 aa26.65■■□□□ 1.86
C9orf3-222ENST00000496567 DOK7Q18PE1 504 aa26.64■■□□□ 1.86
C9orf3-222ENST00000496567 NIM1KQ8IY84 436 aa26.64■■□□□ 1.86
C9orf3-222ENST00000496567 CD209Q9NNX6 404 aa26.64■■□□□ 1.86
C9orf3-222ENST00000496567 PHKA1P46020 1223 aa26.63■■□□□ 1.85
C9orf3-222ENST00000496567 TTC39AQ5SRH9 613 aa26.63■■□□□ 1.85
C9orf3-222ENST00000496567 PODNQ7Z5L7 613 aa26.63■■□□□ 1.85
C9orf3-222ENST00000496567 SBF1O95248 1867 aa26.63■■□□□ 1.85
C9orf3-222ENST00000496567 ECE2O60344 883 aa26.63■■□□□ 1.85
C9orf3-222ENST00000496567 UQCRFS1P1P0C7P4 283 aa26.63■■□□□ 1.85
C9orf3-222ENST00000496567 IL1R1P14778 569 aa26.63■■□□□ 1.85
C9orf3-222ENST00000496567 PRELPP51888 382 aa26.63■■□□□ 1.85
C9orf3-222ENST00000496567 DBNDD1Q9H9R9 158 aa26.63■■□□□ 1.85
C9orf3-222ENST00000496567 CCDC88AQ3V6T2 1871 aa26.62■■□□□ 1.85
C9orf3-222ENST00000496567 FRAT2O75474 233 aaPredicted RBP26.62■■□□□ 1.85
C9orf3-222ENST00000496567 ZNF512BQ96KM6 892 aaPredicted RBP26.62■■□□□ 1.85
C9orf3-222ENST00000496567 ZBTB22O15209 634 aa26.61■■□□□ 1.85
C9orf3-222ENST00000496567 MX1P20591 662 aa26.61■■□□□ 1.85
C9orf3-222ENST00000496567 TDRD7Q8NHU6 1098 aaKnown RBP26.61■■□□□ 1.85
C9orf3-222ENST00000496567 ECHDC1Q9NTX5 307 aa26.61■■□□□ 1.85
C9orf3-222ENST00000496567 TTC41PQ6P2S7 1318 aa26.6■■□□□ 1.85
C9orf3-222ENST00000496567 SEMA3EO15041 775 aa26.6■■□□□ 1.85
C9orf3-222ENST00000496567 ARID4AP29374 1257 aaPredicted RBP26.6■■□□□ 1.85
C9orf3-222ENST00000496567 OTUD7AQ8TE49 926 aaPredicted RBP26.6■■□□□ 1.85
C9orf3-222ENST00000496567 RNF181Q9P0P0 153 aa26.6■■□□□ 1.85
C9orf3-222ENST00000496567 ZNRF3Q9ULT6 936 aa26.6■■□□□ 1.85
C9orf3-222ENST00000496567 SALL3Q9BXA9 1300 aa26.59■■□□□ 1.85
C9orf3-222ENST00000496567 DICER1Q9UPY3 1922 aaKnown RBP26.59■■□□□ 1.85
C9orf3-222ENST00000496567 C9orf131Q5VYM1 1079 aa26.58■■□□□ 1.85
C9orf3-222ENST00000496567 STAP2Q9UGK3 403 aa26.58■■□□□ 1.85
C9orf3-222ENST00000496567 DENND2AQ9ULE3 1009 aa26.58■■□□□ 1.85
C9orf3-222ENST00000496567 COL4A5P29400 1685 aa26.58■■□□□ 1.85
C9orf3-222ENST00000496567 ERC2O15083 957 aa26.58■■□□□ 1.85
C9orf3-222ENST00000496567 ATP5JP18859 108 aa26.58■■□□□ 1.85
C9orf3-222ENST00000496567 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.58■■□□□ 1.85
C9orf3-222ENST00000496567 IQSEC3Q9UPP2 1182 aaPredicted RBP26.58■■□□□ 1.85
C9orf3-222ENST00000496567 PDE4AP27815 886 aa26.57■■□□□ 1.84
C9orf3-222ENST00000496567 PDE1AP54750 535 aa26.57■■□□□ 1.84
C9orf3-222ENST00000496567 CHD4Q14839 1912 aa26.57■■□□□ 1.84
C9orf3-222ENST00000496567 UTRNP46939 3433 aa26.57■■□□□ 1.84
C9orf3-222ENST00000496567 PLEKHM2Q8IWE5 1019 aa26.56■■□□□ 1.84
C9orf3-222ENST00000496567 YDJCA8MPS7 323 aa26.55■■□□□ 1.84
C9orf3-222ENST00000496567 FZD9O00144 591 aa26.55■■□□□ 1.84
C9orf3-222ENST00000496567 RASGRF1Q13972 1273 aa26.55■■□□□ 1.84
C9orf3-222ENST00000496567 OSBPL3Q9H4L5 887 aa26.55■■□□□ 1.84
C9orf3-222ENST00000496567 AOX1Q06278 1338 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms