RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ANKRD18BA2A2Z9 1011 aa18.12■□□□□ 0.49
VTI1A-209ENST00000496445 USP17L3A6NCW0 530 aa18.12■□□□□ 0.49
VTI1A-209ENST00000496445 USP17L4A6NCW7 530 aa18.12■□□□□ 0.49
VTI1A-209ENST00000496445 ADM5C9JUS6 153 aa18.12■□□□□ 0.49
VTI1A-209ENST00000496445 ALDH1L1O75891 902 aa18.12■□□□□ 0.49
VTI1A-209ENST00000496445 CHRNDQ07001 517 aa18.12■□□□□ 0.49
VTI1A-209ENST00000496445 SLFN5Q08AF3 891 aa18.12■□□□□ 0.49
VTI1A-209ENST00000496445 USP17L1Q7RTZ2 530 aa18.12■□□□□ 0.49
VTI1A-209ENST00000496445 ANKRD2Q9GZV1 360 aa18.12■□□□□ 0.49
VTI1A-209ENST00000496445 ZNF408Q9H9D4 720 aa18.12■□□□□ 0.49
VTI1A-209ENST00000496445 IRS2Q9Y4H2 1338 aa18.12■□□□□ 0.49
VTI1A-209ENST00000496445 DACT2Q5SW24 774 aa18.11■□□□□ 0.49
VTI1A-209ENST00000496445 SLC4A10Q6U841 1118 aa18.11■□□□□ 0.49
VTI1A-209ENST00000496445 PAXIP1Q6ZW49 1069 aaPredicted RBP18.11■□□□□ 0.49
VTI1A-209ENST00000496445 KRT26Q7Z3Y9 468 aa18.11■□□□□ 0.49
VTI1A-209ENST00000496445 MXD3Q9BW11 206 aa18.11■□□□□ 0.49
VTI1A-209ENST00000496445 SRCIN1Q9C0H9 1055 aa18.11■□□□□ 0.49
VTI1A-209ENST00000496445 GGA3Q9NZ52 723 aa18.11■□□□□ 0.49
VTI1A-209ENST00000496445 CHMP3Q9Y3E7 222 aa18.11■□□□□ 0.49
VTI1A-209ENST00000496445 SNAP23O00161 211 aa18.1■□□□□ 0.49
VTI1A-209ENST00000496445 IFIT5Q13325 482 aaKnown RBP18.1■□□□□ 0.49
VTI1A-209ENST00000496445 LMBR1LQ6UX01 489 aa18.1■□□□□ 0.49
VTI1A-209ENST00000496445 CDCA7LQ96GN5 454 aa18.1■□□□□ 0.49
VTI1A-209ENST00000496445 KAZALD1Q96I82 304 aa18.1■□□□□ 0.49
VTI1A-209ENST00000496445 COA1Q9GZY4 146 aa18.1■□□□□ 0.49
VTI1A-209ENST00000496445 TAF5LO75529 589 aa18.09■□□□□ 0.49
VTI1A-209ENST00000496445 USP17L8P0C7I0 530 aa18.09■□□□□ 0.49
VTI1A-209ENST00000496445 ECE1P42892 770 aa18.09■□□□□ 0.49
VTI1A-209ENST00000496445 GRM1Q13255 1194 aa18.09■□□□□ 0.49
VTI1A-209ENST00000496445 SSH1Q8WYL5 1049 aa18.09■□□□□ 0.49
VTI1A-209ENST00000496445 SUCLG2Q96I99 432 aa18.09■□□□□ 0.49
VTI1A-209ENST00000496445 ZNF594Q96JF6 807 aaPredicted RBP18.09■□□□□ 0.49
VTI1A-209ENST00000496445 HHIPL1Q96JK4 782 aa18.09■□□□□ 0.49
VTI1A-209ENST00000496445 MYOZ2Q9NPC6 264 aa18.09■□□□□ 0.49
VTI1A-209ENST00000496445 C9orf78Q9NZ63 289 aaPredicted RBP18.09■□□□□ 0.49
VTI1A-209ENST00000496445 UTYO14607 1347 aa18.08■□□□□ 0.49
VTI1A-209ENST00000496445 AOC2O75106 756 aa18.08■□□□□ 0.48
VTI1A-209ENST00000496445 SCARF1Q14162 830 aa18.08■□□□□ 0.48
VTI1A-209ENST00000496445 TNS4Q8IZW8 715 aa18.08■□□□□ 0.48
VTI1A-209ENST00000496445 HELBQ8NG08 1087 aaPredicted RBP18.08■□□□□ 0.48
VTI1A-209ENST00000496445 AIDAQ96BJ3 306 aa18.08■□□□□ 0.48
VTI1A-209ENST00000496445 DCPSQ96C86 337 aaKnown RBP18.08■□□□□ 0.48
VTI1A-209ENST00000496445 ARAP2Q8WZ64 1704 aa18.08■□□□□ 0.48
VTI1A-209ENST00000496445 ECM29Q5VYK3 1845 aa18.07■□□□□ 0.48
VTI1A-209ENST00000496445 PTPRCP08575 1304 aa18.07■□□□□ 0.48
VTI1A-209ENST00000496445 CCER2I3L3R5 266 aa18.07■□□□□ 0.48
VTI1A-209ENST00000496445 NBPF7P0C2Y1 421 aaPredicted RBP18.07■□□□□ 0.48
VTI1A-209ENST00000496445 STRIP1Q5VSL9 837 aa18.07■□□□□ 0.48
VTI1A-209ENST00000496445 ANGEL2Q5VTE6 544 aaKnown RBP18.07■□□□□ 0.48
VTI1A-209ENST00000496445 FBXW7Q969H0 707 aa18.07■□□□□ 0.48
VTI1A-209ENST00000496445 KCNJ4P48050 445 aa18.06■□□□□ 0.48
VTI1A-209ENST00000496445 CTCFP49711 727 aaPredicted RBP18.06■□□□□ 0.48
VTI1A-209ENST00000496445 MAP2K1Q02750 393 aaPredicted RBP18.06■□□□□ 0.48
VTI1A-209ENST00000496445 CCDC57Q2TAC2 916 aa18.06■□□□□ 0.48
VTI1A-209ENST00000496445 TRMT2AQ8IZ69 625 aaKnown RBP18.06■□□□□ 0.48
VTI1A-209ENST00000496445 MYO3BQ8WXR4 1341 aa18.05■□□□□ 0.48
VTI1A-209ENST00000496445 PAPPA2Q9BXP8 1791 aa18.05■□□□□ 0.48
VTI1A-209ENST00000496445 HSPA8P11142 646 aaKnown RBP18.05■□□□□ 0.48
VTI1A-209ENST00000496445 C15orf52Q6ZUT6 534 aaKnown RBP18.05■□□□□ 0.48
VTI1A-209ENST00000496445 SULF1Q8IWU6 871 aa18.05■□□□□ 0.48
VTI1A-209ENST00000496445 CD209Q9NNX6 404 aa18.05■□□□□ 0.48
VTI1A-209ENST00000496445 PRDM10Q9NQV6 1147 aa18.05■□□□□ 0.48
VTI1A-209ENST00000496445 PITPNM2Q9BZ72 1349 aa18.04■□□□□ 0.48
VTI1A-209ENST00000496445 HOXD11P31277 338 aaPredicted RBP18.04■□□□□ 0.48
VTI1A-209ENST00000496445 HUNKP57058 714 aa18.04■□□□□ 0.48
VTI1A-209ENST00000496445 NBPF9Q3BBW0 867 aa18.04■□□□□ 0.48
VTI1A-209ENST00000496445 ANKRD44Q8N8A2 993 aa18.04■□□□□ 0.48
VTI1A-209ENST00000496445 CDCA5Q96FF9 252 aa18.04■□□□□ 0.48
VTI1A-209ENST00000496445 BICC1Q9H694 974 aaKnown RBP18.04■□□□□ 0.48
VTI1A-209ENST00000496445 GBA2Q9HCG7 927 aaPredicted RBP18.04■□□□□ 0.48
VTI1A-209ENST00000496445 LBX1P52954 281 aa18.03■□□□□ 0.48
VTI1A-209ENST00000496445 GTF2IP78347 998 aa18.03■□□□□ 0.48
VTI1A-209ENST00000496445 ALDH1L2Q3SY69 923 aa18.03■□□□□ 0.48
VTI1A-209ENST00000496445 RABL6Q3YEC7 729 aaPredicted RBP18.03■□□□□ 0.48
VTI1A-209ENST00000496445 TAF7LQ5H9L4 462 aa18.03■□□□□ 0.48
VTI1A-209ENST00000496445 TTLL5Q6EMB2 1281 aa18.03■□□□□ 0.48
VTI1A-209ENST00000496445 LDHAL6AQ6ZMR3 332 aa18.03■□□□□ 0.48
VTI1A-209ENST00000496445 SCAF8Q9UPN6 1271 aaKnown RBP18.03■□□□□ 0.48
VTI1A-209ENST00000496445 IL1R1P14778 569 aa18.02■□□□□ 0.48
VTI1A-209ENST00000496445 MAP2K2P36507 400 aa18.02■□□□□ 0.48
VTI1A-209ENST00000496445 CERS5Q8N5B7 392 aa18.02■□□□□ 0.48
VTI1A-209ENST00000496445 PUS3Q9BZE2 481 aaKnown RBP18.02■□□□□ 0.48
VTI1A-209ENST00000496445 CNNM1Q9NRU3 951 aa18.02■□□□□ 0.48
VTI1A-209ENST00000496445 RNF216Q9NWF9 866 aaPredicted RBP18.02■□□□□ 0.48
VTI1A-209ENST00000496445 WNT10BO00744 389 aa18.01■□□□□ 0.47
VTI1A-209ENST00000496445 SASH1O94885 1247 aa18.01■□□□□ 0.47
VTI1A-209ENST00000496445 KIAA0825Q8IV33 1275 aa18.01■□□□□ 0.47
VTI1A-209ENST00000496445 ZIC5Q96T25 663 aa18.01■□□□□ 0.47
VTI1A-209ENST00000496445 SMC4Q9NTJ3 1288 aa18.01■□□□□ 0.47
VTI1A-209ENST00000496445 FAM155AB1AL88 458 aaPredicted RBP18■□□□□ 0.47
VTI1A-209ENST00000496445 PLIN1O60240 522 aa18■□□□□ 0.47
VTI1A-209ENST00000496445 RGMBQ6NW40 437 aa18■□□□□ 0.47
VTI1A-209ENST00000496445 ZNF804AQ7Z570 1209 aa18■□□□□ 0.47
VTI1A-209ENST00000496445 OGFOD1Q8N543 542 aa18■□□□□ 0.47
VTI1A-209ENST00000496445 C2orf69Q8N8R5 385 aa18■□□□□ 0.47
VTI1A-209ENST00000496445 ZBED3Q96IU2 234 aaPredicted RBP18■□□□□ 0.47
VTI1A-209ENST00000496445 USP44Q9H0E7 712 aa18■□□□□ 0.47
VTI1A-209ENST00000496445 BRPF1P55201 1214 aaPredicted RBP17.99■□□□□ 0.47
VTI1A-209ENST00000496445 RIPOR2Q9Y4F9 1068 aa17.99■□□□□ 0.47
VTI1A-209ENST00000496445 MMP14P50281 582 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms