RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 UBE4AQ14139 1066 aa11.96□□□□□ -0.49
PRPF3-207ENST00000496202 PUM3Q15397 648 aaKnown RBP11.96□□□□□ -0.49
PRPF3-207ENST00000496202 ATG9AQ7Z3C6 839 aa11.96□□□□□ -0.49
PRPF3-207ENST00000496202 ERC1Q8IUD2 1116 aa11.96□□□□□ -0.49
PRPF3-207ENST00000496202 EXOC6Q8TAG9 804 aa11.96□□□□□ -0.49
PRPF3-207ENST00000496202 PDE8BO95263 885 aa11.95□□□□□ -0.5
PRPF3-207ENST00000496202 SLC5A1P13866 664 aa11.95□□□□□ -0.5
PRPF3-207ENST00000496202 YY1P25490 414 aa11.95□□□□□ -0.5
PRPF3-207ENST00000496202 PRELPP51888 382 aa11.95□□□□□ -0.5
PRPF3-207ENST00000496202 EIF6P56537 245 aaKnown RBP11.95□□□□□ -0.5
PRPF3-207ENST00000496202 ATP2B3Q16720 1220 aa11.95□□□□□ -0.5
PRPF3-207ENST00000496202 ZNF804AQ7Z570 1209 aa11.95□□□□□ -0.5
PRPF3-207ENST00000496202 DBNDD1Q9H9R9 158 aa11.95□□□□□ -0.5
PRPF3-207ENST00000496202 SNAP23O00161 211 aa11.94□□□□□ -0.5
PRPF3-207ENST00000496202 ECE2O60344 883 aa11.94□□□□□ -0.5
PRPF3-207ENST00000496202 TFCP2Q12800 502 aa11.94□□□□□ -0.5
PRPF3-207ENST00000496202 DOK7Q18PE1 504 aa11.94□□□□□ -0.5
PRPF3-207ENST00000496202 VPS37DQ86XT2 251 aa11.94□□□□□ -0.5
PRPF3-207ENST00000496202 VGLL2Q8N8G2 317 aa11.94□□□□□ -0.5
PRPF3-207ENST00000496202 ZNRF3Q9ULT6 936 aa11.94□□□□□ -0.5
PRPF3-207ENST00000496202 EXOC6BQ9Y2D4 811 aa11.94□□□□□ -0.5
PRPF3-207ENST00000496202 AKAP2Q9Y2D5 859 aa11.94□□□□□ -0.5
PRPF3-207ENST00000496202 NOP58Q9Y2X3 529 aaKnown RBP11.94□□□□□ -0.5
PRPF3-207ENST00000496202 COL4A5P29400 1685 aa11.94□□□□□ -0.5
PRPF3-207ENST00000496202 WTIPA6NIX2 430 aaPredicted RBP11.93□□□□□ -0.5
PRPF3-207ENST00000496202 APBB1O00213 710 aa11.93□□□□□ -0.5
PRPF3-207ENST00000496202 KLRK1P26718 216 aa11.93□□□□□ -0.5
PRPF3-207ENST00000496202 CAVIN4Q5BKX8 364 aa11.93□□□□□ -0.5
PRPF3-207ENST00000496202 DPY19L2Q6NUT2 758 aa11.93□□□□□ -0.5
PRPF3-207ENST00000496202 SIRT2Q8IXJ6 389 aa11.93□□□□□ -0.5
PRPF3-207ENST00000496202 LPIN2Q92539 896 aa11.93□□□□□ -0.5
PRPF3-207ENST00000496202 COA1Q9GZY4 146 aa11.93□□□□□ -0.5
PRPF3-207ENST00000496202 PCDHB15Q9Y5E8 787 aa11.93□□□□□ -0.5
PRPF3-207ENST00000496202 KDM2BQ8NHM5 1336 aa11.92□□□□□ -0.5
PRPF3-207ENST00000496202 ARAP2Q8WZ64 1704 aa11.92□□□□□ -0.5
PRPF3-207ENST00000496202 MYH13Q9UKX3 1938 aa11.92□□□□□ -0.5
PRPF3-207ENST00000496202 RAB11FIP3O75154 756 aa11.92□□□□□ -0.5
PRPF3-207ENST00000496202 TNIP1Q15025 636 aa11.92□□□□□ -0.5
PRPF3-207ENST00000496202 GORABQ5T7V8 394 aa11.92□□□□□ -0.5
PRPF3-207ENST00000496202 C15orf52Q6ZUT6 534 aaKnown RBP11.92□□□□□ -0.5
PRPF3-207ENST00000496202 FBXW7Q969H0 707 aa11.92□□□□□ -0.5
PRPF3-207ENST00000496202 ZNF609O15014 1411 aa11.92□□□□□ -0.5
PRPF3-207ENST00000496202 ZNF541Q9H0D2 1346 aa11.91□□□□□ -0.5
PRPF3-207ENST00000496202 SCN9AQ15858 1988 aa11.91□□□□□ -0.5
PRPF3-207ENST00000496202 A0A1B0GUL7 405 aa11.91□□□□□ -0.5
PRPF3-207ENST00000496202 FZD9O00144 591 aa11.91□□□□□ -0.5
PRPF3-207ENST00000496202 FRAT2O75474 233 aaPredicted RBP11.91□□□□□ -0.5
PRPF3-207ENST00000496202 RAD17O75943 681 aa11.91□□□□□ -0.5
PRPF3-207ENST00000496202 FGFR2P21802 821 aa11.91□□□□□ -0.5
PRPF3-207ENST00000496202 HIBADHP31937 336 aaKnown RBP11.91□□□□□ -0.5
PRPF3-207ENST00000496202 GYG1P46976 350 aa11.91□□□□□ -0.5
PRPF3-207ENST00000496202 CIAPIN1Q6FI81 312 aa11.91□□□□□ -0.5
PRPF3-207ENST00000496202 TXNRD3Q86VQ6 643 aa11.91□□□□□ -0.5
PRPF3-207ENST00000496202 IFNLR1Q8IU57 520 aaPredicted RBP11.91□□□□□ -0.5
PRPF3-207ENST00000496202 ZNF526Q8TF50 670 aaPredicted RBP11.91□□□□□ -0.5
PRPF3-207ENST00000496202 KIF1BPQ96EK5 621 aa11.91□□□□□ -0.5
PRPF3-207ENST00000496202 NEUROD6Q96NK8 337 aa11.91□□□□□ -0.5
PRPF3-207ENST00000496202 BCL11AQ9H165 835 aa11.91□□□□□ -0.5
PRPF3-207ENST00000496202 ZBTB47Q9UFB7 747 aaPredicted RBP11.91□□□□□ -0.5
PRPF3-207ENST00000496202 GJA3Q9Y6H8 435 aa11.91□□□□□ -0.5
PRPF3-207ENST00000496202 PSME4Q14997 1843 aa11.9□□□□□ -0.5
PRPF3-207ENST00000496202 SASH1O94885 1247 aa11.9□□□□□ -0.5
PRPF3-207ENST00000496202 TNNI3KQ59H18 835 aa11.9□□□□□ -0.5
PRPF3-207ENST00000496202 PODNQ7Z5L7 613 aa11.9□□□□□ -0.5
PRPF3-207ENST00000496202 RHPN1Q8TCX5 695 aa11.9□□□□□ -0.5
PRPF3-207ENST00000496202 RWDD1Q9H446 243 aaPredicted RBP11.9□□□□□ -0.5
PRPF3-207ENST00000496202 GPR108Q9NPR9 543 aa11.9□□□□□ -0.5
PRPF3-207ENST00000496202 GNL3LQ9NVN8 582 aaKnown RBP11.9□□□□□ -0.5
PRPF3-207ENST00000496202 FPGT-TNNI3KV9GXZ4 949 aa11.9□□□□□ -0.5
PRPF3-207ENST00000496202 IRS2Q9Y4H2 1338 aa11.89□□□□□ -0.51
PRPF3-207ENST00000496202 GLTPD2A6NH11 291 aa11.89□□□□□ -0.51
PRPF3-207ENST00000496202 YDJCA8MPS7 323 aa11.89□□□□□ -0.51
PRPF3-207ENST00000496202 CXCL9Q07325 125 aa11.89□□□□□ -0.51
PRPF3-207ENST00000496202 HDAC1Q13547 482 aaPredicted RBP11.89□□□□□ -0.51
PRPF3-207ENST00000496202 GPC2Q8N158 579 aa11.89□□□□□ -0.51
PRPF3-207ENST00000496202 CLASRPQ8N2M8 674 aaKnown RBP11.89□□□□□ -0.51
PRPF3-207ENST00000496202 FAM84BQ96KN1 310 aaPredicted RBP11.89□□□□□ -0.51
PRPF3-207ENST00000496202 LRRCC1Q9C099 1032 aa11.89□□□□□ -0.51
PRPF3-207ENST00000496202 CD209Q9NNX6 404 aa11.89□□□□□ -0.51
PRPF3-207ENST00000496202 IL1RAPL2Q9NP60 686 aa11.89□□□□□ -0.51
PRPF3-207ENST00000496202 USP17L3A6NCW0 530 aa11.88□□□□□ -0.51
PRPF3-207ENST00000496202 USP17L4A6NCW7 530 aa11.88□□□□□ -0.51
PRPF3-207ENST00000496202 DDNO94850 711 aaPredicted RBP11.88□□□□□ -0.51
PRPF3-207ENST00000496202 LMOD1P29536 600 aaPredicted RBP11.88□□□□□ -0.51
PRPF3-207ENST00000496202 ADORA1P30542 326 aa11.88□□□□□ -0.51
PRPF3-207ENST00000496202 BCAMP50895 628 aa11.88□□□□□ -0.51
PRPF3-207ENST00000496202 TIMM10P62072 90 aa11.88□□□□□ -0.51
PRPF3-207ENST00000496202 SAMD1Q6SPF0 538 aaPredicted RBP11.88□□□□□ -0.51
PRPF3-207ENST00000496202 USP17L1Q7RTZ2 530 aa11.88□□□□□ -0.51
PRPF3-207ENST00000496202 FBXO33Q7Z6M2 555 aa11.88□□□□□ -0.51
PRPF3-207ENST00000496202 AACSQ86V21 672 aa11.88□□□□□ -0.51
PRPF3-207ENST00000496202 XAGE2Q96GT9 111 aa11.88□□□□□ -0.51
PRPF3-207ENST00000496202 DCTPP1Q9H773 170 aa11.88□□□□□ -0.51
PRPF3-207ENST00000496202 GPBP1L1Q9HC44 474 aaPredicted RBP11.88□□□□□ -0.51
PRPF3-207ENST00000496202 IQSEC3Q9UPP2 1182 aaPredicted RBP11.88□□□□□ -0.51
PRPF3-207ENST00000496202 SPDYE4A6NLX3 237 aa11.87□□□□□ -0.51
PRPF3-207ENST00000496202 PSMD14O00487 310 aa11.87□□□□□ -0.51
PRPF3-207ENST00000496202 IFIT2P09913 472 aaKnown RBP11.87□□□□□ -0.51
PRPF3-207ENST00000496202 IL1R1P14778 569 aa11.87□□□□□ -0.51
PRPF3-207ENST00000496202 GTF2IP78347 998 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms