RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 PCDH11YQ9BZA8 1340 aa6.71□□□□□ -1.34
XPA-204ENST00000496104 NCAPD2Q15021 1401 aa6.7□□□□□ -1.34
XPA-204ENST00000496104 FBLN1P23142 703 aa6.7□□□□□ -1.34
XPA-204ENST00000496104 RFC4P35249 363 aa6.7□□□□□ -1.34
XPA-204ENST00000496104 GMPRP36959 345 aa6.7□□□□□ -1.34
XPA-204ENST00000496104 NOGQ13253 232 aa6.7□□□□□ -1.34
XPA-204ENST00000496104 PADI6Q6TGC4 694 aa6.7□□□□□ -1.34
XPA-204ENST00000496104 GIGYF2Q6Y7W6 1299 aaKnown RBP6.7□□□□□ -1.34
XPA-204ENST00000496104 C2CD5Q86YS7 1000 aa6.7□□□□□ -1.34
XPA-204ENST00000496104 SYNE4Q8N205 404 aa6.7□□□□□ -1.34
XPA-204ENST00000496104 C7orf43Q8WVR3 580 aa6.7□□□□□ -1.34
XPA-204ENST00000496104 SENP2Q9HC62 589 aa6.7□□□□□ -1.34
XPA-204ENST00000496104 ANKRD26Q9UPS8 1709 aa6.7□□□□□ -1.34
XPA-204ENST00000496104 FZD9O00144 591 aa6.69□□□□□ -1.34
XPA-204ENST00000496104 ACTN4O43707 911 aaKnown RBP6.69□□□□□ -1.34
XPA-204ENST00000496104 CELF2O95319 508 aaKnown RBP6.69□□□□□ -1.34
XPA-204ENST00000496104 EN2P19622 333 aaPredicted RBP6.69□□□□□ -1.34
XPA-204ENST00000496104 HMGB2P26583 209 aaKnown RBP6.69□□□□□ -1.34
XPA-204ENST00000496104 HOXC9P31274 260 aa6.69□□□□□ -1.34
XPA-204ENST00000496104 EPS15P42566 896 aa6.69□□□□□ -1.34
XPA-204ENST00000496104 OLFM4Q6UX06 510 aa6.69□□□□□ -1.34
XPA-204ENST00000496104 ZNF296Q8WUU4 475 aaPredicted RBP6.69□□□□□ -1.34
XPA-204ENST00000496104 CLUAP1Q96AJ1 413 aa6.69□□□□□ -1.34
XPA-204ENST00000496104 PHOX2BQ99453 314 aa6.69□□□□□ -1.34
XPA-204ENST00000496104 EYA1Q99502 592 aa6.69□□□□□ -1.34
XPA-204ENST00000496104 GLIS2Q9BZE0 524 aaPredicted RBP6.69□□□□□ -1.34
XPA-204ENST00000496104 CDH23Q9H251 3354 aa6.68□□□□□ -1.34
XPA-204ENST00000496104 RAD21O60216 631 aa6.68□□□□□ -1.34
XPA-204ENST00000496104 RPIAP49247 311 aa6.68□□□□□ -1.34
XPA-204ENST00000496104 KIF23Q02241 960 aaPredicted RBP6.68□□□□□ -1.34
XPA-204ENST00000496104 KMT5BQ4FZB7 885 aa6.68□□□□□ -1.34
XPA-204ENST00000496104 FBXO46Q6PJ61 603 aaPredicted RBP6.68□□□□□ -1.34
XPA-204ENST00000496104 CSRNP1Q96S65 589 aa6.68□□□□□ -1.34
XPA-204ENST00000496104 MPHOSPH9Q99550 1183 aa6.68□□□□□ -1.34
XPA-204ENST00000496104 CGNL1Q0VF96 1302 aa6.68□□□□□ -1.34
XPA-204ENST00000496104 KTN1Q86UP2 1357 aaKnown RBP6.68□□□□□ -1.34
XPA-204ENST00000496104 PKN2Q16513 984 aaKnown RBP6.67□□□□□ -1.34
XPA-204ENST00000496104 SH3D19Q5HYK7 790 aa6.67□□□□□ -1.34
XPA-204ENST00000496104 SLC51AQ86UW1 340 aa6.67□□□□□ -1.34
XPA-204ENST00000496104 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.67□□□□□ -1.34
XPA-204ENST00000496104 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.67□□□□□ -1.34
XPA-204ENST00000496104 TRAIPQ9BWF2 469 aa6.67□□□□□ -1.34
XPA-204ENST00000496104 ZNF277Q9NRM2 450 aaPredicted RBP6.67□□□□□ -1.34
XPA-204ENST00000496104 PIEZO1Q92508 2521 aa6.66□□□□□ -1.34
XPA-204ENST00000496104 TTC24A2A3L6 582 aaPredicted RBP6.66□□□□□ -1.34
XPA-204ENST00000496104 NR1I2O75469 434 aa6.66□□□□□ -1.34
XPA-204ENST00000496104 CD2BP2O95400 341 aaKnown RBP6.66□□□□□ -1.34
XPA-204ENST00000496104 SERPINB2P05120 415 aa6.66□□□□□ -1.34
XPA-204ENST00000496104 CRKLP46109 303 aaKnown RBP6.66□□□□□ -1.34
XPA-204ENST00000496104 CAP1Q01518 475 aa6.66□□□□□ -1.34
XPA-204ENST00000496104 AKAP4Q5JQC9 854 aa6.66□□□□□ -1.34
XPA-204ENST00000496104 USPL1Q5W0Q7 1092 aa6.66□□□□□ -1.34
XPA-204ENST00000496104 INTS5Q6P9B9 1019 aaKnown RBP6.66□□□□□ -1.34
XPA-204ENST00000496104 Q7L0L9 218 aa6.66□□□□□ -1.34
XPA-204ENST00000496104 GPC2Q8N158 579 aa6.66□□□□□ -1.34
XPA-204ENST00000496104 CCDC24Q8N4L8 307 aa6.66□□□□□ -1.34
XPA-204ENST00000496104 R3HDMLQ9H3Y0 253 aa6.66□□□□□ -1.34
XPA-204ENST00000496104 STXBP5LQ9Y2K9 1186 aa6.66□□□□□ -1.34
XPA-204ENST00000496104 TTLL12Q14166 644 aaPredicted RBP6.65□□□□□ -1.34
XPA-204ENST00000496104 MCM6Q14566 821 aa6.65□□□□□ -1.34
XPA-204ENST00000496104 SKIV2LQ15477 1246 aaKnown RBP6.65□□□□□ -1.34
XPA-204ENST00000496104 PRPF40BQ6NWY9 871 aaKnown RBP6.65□□□□□ -1.34
XPA-204ENST00000496104 KIFC2Q96AC6 838 aa6.65□□□□□ -1.34
XPA-204ENST00000496104 PCMTD1Q96MG8 357 aaPredicted RBP6.65□□□□□ -1.34
XPA-204ENST00000496104 PGAP2Q9UHJ9 254 aa6.65□□□□□ -1.34
XPA-204ENST00000496104 CENPJQ9HC77 1338 aaPredicted RBP6.65□□□□□ -1.35
XPA-204ENST00000496104 SCN7AQ01118 1682 aa6.65□□□□□ -1.35
XPA-204ENST00000496104 H0YIN7 160 aa6.64□□□□□ -1.35
XPA-204ENST00000496104 CFHP08603 1231 aa6.64□□□□□ -1.35
XPA-204ENST00000496104 SMPD1P17405 629 aa6.64□□□□□ -1.35
XPA-204ENST00000496104 HIRAP54198 1017 aaPredicted RBP6.64□□□□□ -1.35
XPA-204ENST00000496104 HUNKP57058 714 aa6.64□□□□□ -1.35
XPA-204ENST00000496104 PROCA1Q8NCQ7 364 aaPredicted RBP6.64□□□□□ -1.35
XPA-204ENST00000496104 DCAF11Q8TEB1 546 aa6.64□□□□□ -1.35
XPA-204ENST00000496104 PUS7Q96PZ0 661 aaKnown RBP6.64□□□□□ -1.35
XPA-204ENST00000496104 TMOD3Q9NYL9 352 aa6.64□□□□□ -1.35
XPA-204ENST00000496104 NXF1Q9UBU9 619 aaKnown RBP6.64□□□□□ -1.35
XPA-204ENST00000496104 SOS1Q07889 1333 aaPredicted RBP6.64□□□□□ -1.35
XPA-204ENST00000496104 MRC1P22897 1456 aa6.64□□□□□ -1.35
XPA-204ENST00000496104 SLC10A3P09131 477 aa6.63□□□□□ -1.35
XPA-204ENST00000496104 SSTR3P32745 418 aaPredicted RBP6.63□□□□□ -1.35
XPA-204ENST00000496104 FKBP4Q02790 459 aaKnown RBP eCLIP6.63□□□□□ -1.35
XPA-204ENST00000496104 TMCO4Q5TGY1 634 aa6.63□□□□□ -1.35
XPA-204ENST00000496104 RGMBQ6NW40 437 aa6.63□□□□□ -1.35
XPA-204ENST00000496104 BICDL1Q6ZP65 573 aa6.63□□□□□ -1.35
XPA-204ENST00000496104 USP50Q70EL3 339 aaPredicted RBP6.63□□□□□ -1.35
XPA-204ENST00000496104 KDM3BQ7LBC6 1761 aa6.63□□□□□ -1.35
XPA-204ENST00000496104 IRF7Q92985 503 aa6.63□□□□□ -1.35
XPA-204ENST00000496104 ZNF622Q969S3 477 aaKnown RBP eCLIP6.63□□□□□ -1.354e-6■■■■□ 26.6
XPA-204ENST00000496104 MTMR10Q9NXD2 777 aa6.63□□□□□ -1.35
XPA-204ENST00000496104 A0A1W2PP64 1363 aa6.62□□□□□ -1.35
XPA-204ENST00000496104 RTL1A6NKG5 1358 aa6.62□□□□□ -1.35
XPA-204ENST00000496104 SYNGAP1Q96PV0 1343 aa6.62□□□□□ -1.35
XPA-204ENST00000496104 TBC1D8O95759 1140 aa6.62□□□□□ -1.35
XPA-204ENST00000496104 TATP17735 454 aaPredicted RBP6.62□□□□□ -1.35
XPA-204ENST00000496104 PRR5LQ6MZQ0 368 aa6.62□□□□□ -1.35
XPA-204ENST00000496104 SCUBE3Q8IX30 993 aa6.62□□□□□ -1.35
XPA-204ENST00000496104 CCDC82Q8N4S0 544 aa6.62□□□□□ -1.35
XPA-204ENST00000496104 RAPGEF4Q8WZA2 1011 aa6.62□□□□□ -1.35
XPA-204ENST00000496104 FAM122AQ96E09 287 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms