RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 ALDH1B1P30837 517 aa18.42■□□□□ 0.54
GAPDH-210ENST00000496049 LRRC24Q50LG9 513 aa18.42■□□□□ 0.54
GAPDH-210ENST00000496049 STYK1Q6J9G0 422 aa18.42■□□□□ 0.54
GAPDH-210ENST00000496049 BCL11AQ9H165 835 aa18.42■□□□□ 0.54
GAPDH-210ENST00000496049 BSDC1Q9NW68 430 aaPredicted RBP18.42■□□□□ 0.54
GAPDH-210ENST00000496049 AKAP2Q9Y2D5 859 aa18.42■□□□□ 0.54
GAPDH-210ENST00000496049 LTBP1Q14766 1721 aa18.41■□□□□ 0.54
GAPDH-210ENST00000496049 SMARCA5O60264 1052 aaPredicted RBP18.41■□□□□ 0.54
GAPDH-210ENST00000496049 ATG9AQ7Z3C6 839 aa18.41■□□□□ 0.54
GAPDH-210ENST00000496049 CELF1Q92879 486 aaKnown RBP18.41■□□□□ 0.54
GAPDH-210ENST00000496049 GPATCH3Q96I76 525 aa18.41■□□□□ 0.54
GAPDH-210ENST00000496049 BEGAINQ9BUH8 593 aa18.41■□□□□ 0.54
GAPDH-210ENST00000496049 TMX4Q9H1E5 349 aaPredicted RBP18.41■□□□□ 0.54
GAPDH-210ENST00000496049 IL1RAPL2Q9NP60 686 aa18.41■□□□□ 0.54
GAPDH-210ENST00000496049 ABT1Q9ULW3 272 aaKnown RBP18.41■□□□□ 0.54
GAPDH-210ENST00000496049 TAF1P21675 1872 aa18.41■□□□□ 0.54
GAPDH-210ENST00000496049 CACNA1SQ13698 1873 aa18.41■□□□□ 0.54
GAPDH-210ENST00000496049 ZNF609O15014 1411 aa18.4■□□□□ 0.54
GAPDH-210ENST00000496049 BBOX1O75936 387 aa18.4■□□□□ 0.54
GAPDH-210ENST00000496049 SASH1O94885 1247 aa18.4■□□□□ 0.54
GAPDH-210ENST00000496049 ITGBL1O95965 494 aaPredicted RBP18.4■□□□□ 0.54
GAPDH-210ENST00000496049 IFIT2P09913 472 aaKnown RBP18.4■□□□□ 0.54
GAPDH-210ENST00000496049 TFCP2Q12800 502 aa18.4■□□□□ 0.54
GAPDH-210ENST00000496049 GRM1Q13255 1194 aa18.4■□□□□ 0.54
GAPDH-210ENST00000496049 EAPPQ56P03 285 aaPredicted RBP18.4■□□□□ 0.54
GAPDH-210ENST00000496049 TTLL6Q8N841 843 aa18.4■□□□□ 0.54
GAPDH-210ENST00000496049 CNKSR1Q969H4 720 aa18.4■□□□□ 0.54
GAPDH-210ENST00000496049 PUS3Q9BZE2 481 aaKnown RBP18.4■□□□□ 0.54
GAPDH-210ENST00000496049 GPR108Q9NPR9 543 aa18.4■□□□□ 0.54
GAPDH-210ENST00000496049 ZNF219Q9P2Y4 722 aaPredicted RBP18.4■□□□□ 0.54
GAPDH-210ENST00000496049 RIPOR2Q9Y4F9 1068 aa18.4■□□□□ 0.54
GAPDH-210ENST00000496049 LRRC37AA6NMS7 1700 aa18.4■□□□□ 0.54
GAPDH-210ENST00000496049 COL4A1P02462 1669 aa18.39■□□□□ 0.53
GAPDH-210ENST00000496049 PPEF1O14829 653 aaPredicted RBP18.39■□□□□ 0.53
GAPDH-210ENST00000496049 PRPF38BQ5VTL8 546 aaKnown RBP18.39■□□□□ 0.53
GAPDH-210ENST00000496049 PAXIP1Q6ZW49 1069 aaPredicted RBP18.39■□□□□ 0.53
GAPDH-210ENST00000496049 AACSQ86V21 672 aa18.39■□□□□ 0.53
GAPDH-210ENST00000496049 ZNF622Q969S3 477 aaKnown RBP eCLIP18.39■□□□□ 0.53
GAPDH-210ENST00000496049 ANKRD2Q9GZV1 360 aa18.39■□□□□ 0.53
GAPDH-210ENST00000496049 ARAP2Q8WZ64 1704 aa18.39■□□□□ 0.53
GAPDH-210ENST00000496049 RGS3P49796 1198 aa18.38■□□□□ 0.53
GAPDH-210ENST00000496049 PUM3Q15397 648 aaKnown RBP18.38■□□□□ 0.53
GAPDH-210ENST00000496049 TNNI3KQ59H18 835 aa18.38■□□□□ 0.53
GAPDH-210ENST00000496049 FPGT-TNNI3KV9GXZ4 949 aa18.38■□□□□ 0.53
GAPDH-210ENST00000496049 PDE8BO95263 885 aa18.37■□□□□ 0.53
GAPDH-210ENST00000496049 CHRNDQ07001 517 aa18.37■□□□□ 0.53
GAPDH-210ENST00000496049 TAF1DQ9H5J8 278 aaPredicted RBP18.37■□□□□ 0.53
GAPDH-210ENST00000496049 CLEC11AQ9Y240 323 aa18.37■□□□□ 0.53
GAPDH-210ENST00000496049 SLC5A1P13866 664 aa18.36■□□□□ 0.53
GAPDH-210ENST00000496049 MX1P20591 662 aa18.36■□□□□ 0.53
GAPDH-210ENST00000496049 KCNJ4P48050 445 aa18.36■□□□□ 0.53
GAPDH-210ENST00000496049 SOX10P56693 466 aa18.36■□□□□ 0.53
GAPDH-210ENST00000496049 DGKZQ13574 1117 aa18.36■□□□□ 0.53
GAPDH-210ENST00000496049 ATP2B3Q16720 1220 aa18.36■□□□□ 0.53
GAPDH-210ENST00000496049 ADAMTSL1Q8N6G6 1762 aa18.36■□□□□ 0.53
GAPDH-210ENST00000496049 IQCA1LA6NCM1 817 aa18.35■□□□□ 0.53
GAPDH-210ENST00000496049 VGLL2Q8N8G2 317 aa18.35■□□□□ 0.53
GAPDH-210ENST00000496049 MINPP1Q9UNW1 487 aa18.35■□□□□ 0.53
GAPDH-210ENST00000496049 XDHP47989 1333 aa18.34■□□□□ 0.53
GAPDH-210ENST00000496049 AOX1Q06278 1338 aa18.34■□□□□ 0.53
GAPDH-210ENST00000496049 A0A1B0GUL7 405 aa18.34■□□□□ 0.53
GAPDH-210ENST00000496049 IFIT1P09914 478 aaKnown RBP18.34■□□□□ 0.53
GAPDH-210ENST00000496049 PDE4AP27815 886 aa18.34■□□□□ 0.53
GAPDH-210ENST00000496049 GORABQ5T7V8 394 aa18.34■□□□□ 0.53
GAPDH-210ENST00000496049 PRPF40BQ6NWY9 871 aaKnown RBP18.34■□□□□ 0.53
GAPDH-210ENST00000496049 LPIN2Q92539 896 aa18.34■□□□□ 0.53
GAPDH-210ENST00000496049 CAPNS2Q96L46 248 aa18.34■□□□□ 0.53
GAPDH-210ENST00000496049 NEUROD6Q96NK8 337 aa18.34■□□□□ 0.53
GAPDH-210ENST00000496049 ANKIB1Q9P2G1 1089 aa18.34■□□□□ 0.53
GAPDH-210ENST00000496049 ATP6V0A2Q9Y487 856 aa18.34■□□□□ 0.53
GAPDH-210ENST00000496049 TTC41PQ6P2S7 1318 aa18.33■□□□□ 0.53
GAPDH-210ENST00000496049 ERC2O15083 957 aa18.33■□□□□ 0.52
GAPDH-210ENST00000496049 SP8Q8IXZ3 490 aa18.33■□□□□ 0.52
GAPDH-210ENST00000496049 EAF2Q96CJ1 260 aaPredicted RBP18.33■□□□□ 0.52
GAPDH-210ENST00000496049 C21orf2O43822 256 aa18.32■□□□□ 0.52
GAPDH-210ENST00000496049 UBE4AQ14139 1066 aa18.32■□□□□ 0.52
GAPDH-210ENST00000496049 MAP1SQ66K74 1059 aaPredicted RBP18.32■□□□□ 0.52
GAPDH-210ENST00000496049 CYP4F22Q6NT55 531 aa18.32■□□□□ 0.52
GAPDH-210ENST00000496049 HELBQ8NG08 1087 aaPredicted RBP18.32■□□□□ 0.52
GAPDH-210ENST00000496049 CCDC8Q9H0W5 538 aaPredicted RBP18.32■□□□□ 0.52
GAPDH-210ENST00000496049 ECHDC1Q9NTX5 307 aa18.32■□□□□ 0.52
GAPDH-210ENST00000496049 TAF5LO75529 589 aa18.31■□□□□ 0.52
GAPDH-210ENST00000496049 CC2D2BQ6DHV5 1058 aa18.31■□□□□ 0.52
GAPDH-210ENST00000496049 PLEKHM2Q8IWE5 1019 aa18.31■□□□□ 0.52
GAPDH-210ENST00000496049 GPR101Q96P66 508 aaPredicted RBP18.31■□□□□ 0.52
GAPDH-210ENST00000496049 LEMD3Q9Y2U8 911 aa18.31■□□□□ 0.52
GAPDH-210ENST00000496049 SLX4Q8IY92 1834 aa18.3■□□□□ 0.52
GAPDH-210ENST00000496049 SALL3Q9BXA9 1300 aa18.3■□□□□ 0.52
GAPDH-210ENST00000496049 ATP2B4P23634 1241 aa18.3■□□□□ 0.52
GAPDH-210ENST00000496049 PDE1AP54750 535 aa18.3■□□□□ 0.52
GAPDH-210ENST00000496049 GRIPAP1Q4V328 841 aa18.3■□□□□ 0.52
GAPDH-210ENST00000496049 CCDC158Q5M9N0 1113 aa18.3■□□□□ 0.52
GAPDH-210ENST00000496049 SOGA3Q5TF21 947 aa18.3■□□□□ 0.52
GAPDH-210ENST00000496049 SKAP1Q86WV1 359 aa18.3■□□□□ 0.52
GAPDH-210ENST00000496049 CNTROBQ8N137 903 aa18.3■□□□□ 0.52
GAPDH-210ENST00000496049 OTUD7AQ8TE49 926 aaPredicted RBP18.3■□□□□ 0.52
GAPDH-210ENST00000496049 TAOK3Q9H2K8 898 aa18.3■□□□□ 0.52
GAPDH-210ENST00000496049 OSBPL3Q9H4L5 887 aa18.3■□□□□ 0.52
GAPDH-210ENST00000496049 STAP2Q9UGK3 403 aa18.3■□□□□ 0.52
GAPDH-210ENST00000496049 DBNLQ9UJU6 430 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms