RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 NKX1-1Q15270 411 aaPredicted RBP11.56□□□□□ -0.56
SURF1-204ENST00000495952 LMBR1LQ6UX01 489 aa11.56□□□□□ -0.56
SURF1-204ENST00000495952 STOX1Q6ZVD7 989 aa11.56□□□□□ -0.56
SURF1-204ENST00000495952 SMAP1Q8IYB5 467 aaPredicted RBP11.56□□□□□ -0.56
SURF1-204ENST00000495952 TCEANC2Q96MN5 208 aa11.56□□□□□ -0.56
SURF1-204ENST00000495952 DNAJC2Q99543 621 aaKnown RBP11.56□□□□□ -0.56
SURF1-204ENST00000495952 CCDC94Q9BW85 323 aaPredicted RBP11.56□□□□□ -0.56
SURF1-204ENST00000495952 KCND1Q9NSA2 647 aa11.56□□□□□ -0.56
SURF1-204ENST00000495952 MAST3O60307 1309 aa11.56□□□□□ -0.56
SURF1-204ENST00000495952 NUP98P52948 1817 aa11.56□□□□□ -0.56
SURF1-204ENST00000495952 CARMIL3Q8ND23 1372 aa11.55□□□□□ -0.56
SURF1-204ENST00000495952 RNF113AO15541 343 aaKnown RBP11.55□□□□□ -0.56
SURF1-204ENST00000495952 CTIFO43310 598 aaKnown RBP11.55□□□□□ -0.56
SURF1-204ENST00000495952 NR1I2O75469 434 aa11.55□□□□□ -0.56
SURF1-204ENST00000495952 YEATS4O95619 227 aa11.55□□□□□ -0.56
SURF1-204ENST00000495952 ATF3P18847 181 aa11.55□□□□□ -0.56
SURF1-204ENST00000495952 ZC3H6P61129 1189 aaKnown RBP11.55□□□□□ -0.56
SURF1-204ENST00000495952 FGD1P98174 961 aa11.55□□□□□ -0.56
SURF1-204ENST00000495952 FAM160A1Q05DH4 1040 aa11.55□□□□□ -0.56
SURF1-204ENST00000495952 STK3Q13188 491 aa11.55□□□□□ -0.56
SURF1-204ENST00000495952 CADPS2Q86UW7 1296 aa11.55□□□□□ -0.56
SURF1-204ENST00000495952 LUZP1Q86V48 1076 aa11.55□□□□□ -0.56
SURF1-204ENST00000495952 DDX54Q8TDD1 881 aaKnown RBP11.55□□□□□ -0.56
SURF1-204ENST00000495952 EDC3Q96F86 508 aaKnown RBP11.55□□□□□ -0.56
SURF1-204ENST00000495952 BPIFA3Q9BQP9 254 aa11.55□□□□□ -0.56
SURF1-204ENST00000495952 PLA2G12BQ9BX93 195 aa11.55□□□□□ -0.56
SURF1-204ENST00000495952 ANO10Q9NW15 660 aa11.55□□□□□ -0.56
SURF1-204ENST00000495952 PYCARDQ9ULZ3 195 aa11.55□□□□□ -0.56
SURF1-204ENST00000495952 AKAP2Q9Y2D5 859 aa11.55□□□□□ -0.56
SURF1-204ENST00000495952 WDR17Q8IZU2 1322 aa11.55□□□□□ -0.56
SURF1-204ENST00000495952 SMTNL1A8MU46 457 aa11.54□□□□□ -0.56
SURF1-204ENST00000495952 E7EWF7 191 aa11.54□□□□□ -0.56
SURF1-204ENST00000495952 GOLGA6L19H0YKK7 550 aa11.54□□□□□ -0.56
SURF1-204ENST00000495952 DHX16O60231 1041 aaKnown RBP11.54□□□□□ -0.56
SURF1-204ENST00000495952 IFIT1P09914 478 aaKnown RBP11.54□□□□□ -0.56
SURF1-204ENST00000495952 CSB-PGBD3P0DP91 1061 aa11.54□□□□□ -0.56
SURF1-204ENST00000495952 HSPD1P10809 573 aaKnown RBP11.54□□□□□ -0.56
SURF1-204ENST00000495952 RBM10P98175 930 aaKnown RBP11.54□□□□□ -0.56
SURF1-204ENST00000495952 TRIM28Q13263 835 aaKnown RBP11.54□□□□□ -0.56
SURF1-204ENST00000495952 COL9A3Q14050 684 aaPredicted RBP11.54□□□□□ -0.56
SURF1-204ENST00000495952 IQCB1Q15051 598 aa11.54□□□□□ -0.56
SURF1-204ENST00000495952 FAM173BQ6P4H8 233 aa11.54□□□□□ -0.56
SURF1-204ENST00000495952 DDX46Q7L014 1031 aaKnown RBP11.54□□□□□ -0.56
SURF1-204ENST00000495952 BRAPQ7Z569 592 aa11.54□□□□□ -0.56
SURF1-204ENST00000495952 ENGASEQ8NFI3 743 aa11.54□□□□□ -0.56
SURF1-204ENST00000495952 RBM33Q96EV2 1170 aaKnown RBP11.54□□□□□ -0.56
SURF1-204ENST00000495952 ZNF830Q96NB3 372 aaPredicted RBP11.54□□□□□ -0.56
SURF1-204ENST00000495952 RTEL1Q9NZ71 1219 aa11.54□□□□□ -0.56
SURF1-204ENST00000495952 TFIP11Q9UBB9 837 aaKnown RBP11.54□□□□□ -0.56
SURF1-204ENST00000495952 PAXBP1Q9Y5B6 917 aa11.54□□□□□ -0.56
SURF1-204ENST00000495952 RREB1Q92766 1687 aa11.54□□□□□ -0.56
SURF1-204ENST00000495952 BCORQ6W2J9 1755 aa11.54□□□□□ -0.56
SURF1-204ENST00000495952 PHLPP1O60346 1717 aa11.53□□□□□ -0.56
SURF1-204ENST00000495952 KINO60870 393 aaKnown RBP11.53□□□□□ -0.56
SURF1-204ENST00000495952 CTDNEP1O95476 244 aa11.53□□□□□ -0.56
SURF1-204ENST00000495952 PTGS1P23219 599 aa11.53□□□□□ -0.56
SURF1-204ENST00000495952 KCNJ6P48051 423 aa11.53□□□□□ -0.56
SURF1-204ENST00000495952 PLCB2Q00722 1185 aa11.53□□□□□ -0.56
SURF1-204ENST00000495952 ZSCAN25Q6NSZ9 544 aa11.53□□□□□ -0.56
SURF1-204ENST00000495952 CCDC129Q6ZRS4 1044 aa11.53□□□□□ -0.56
SURF1-204ENST00000495952 CKAP2LQ8IYA6 745 aa11.53□□□□□ -0.56
SURF1-204ENST00000495952 CEP57L1Q8IYX8 460 aa11.53□□□□□ -0.56
SURF1-204ENST00000495952 ANKRD7Q92527 254 aa11.53□□□□□ -0.56
SURF1-204ENST00000495952 SEC62Q99442 399 aaKnown RBP11.53□□□□□ -0.56
SURF1-204ENST00000495952 ISCA1Q9BUE6 129 aa11.53□□□□□ -0.56
SURF1-204ENST00000495952 TRIM5Q9C035 493 aa11.53□□□□□ -0.56
SURF1-204ENST00000495952 NAT10Q9H0A0 1025 aaKnown RBP11.53□□□□□ -0.56
SURF1-204ENST00000495952 CDHR2Q9BYE9 1310 aa11.53□□□□□ -0.56
SURF1-204ENST00000495952 MYO5AQ9Y4I1 1855 aaKnown RBP11.53□□□□□ -0.56
SURF1-204ENST00000495952 RIC1Q4ADV7 1423 aa11.52□□□□□ -0.56
SURF1-204ENST00000495952 A0A1B0GUL6 1792 aa11.52□□□□□ -0.57
SURF1-204ENST00000495952 NBPF26B4DH59 902 aa11.52□□□□□ -0.57
SURF1-204ENST00000495952 KIF2AO00139 706 aaPredicted RBP11.52□□□□□ -0.57
SURF1-204ENST00000495952 GOLIM4O00461 696 aa11.52□□□□□ -0.57
SURF1-204ENST00000495952 PDIA3P30101 505 aaKnown RBP11.52□□□□□ -0.57
SURF1-204ENST00000495952 GSDMDP57764 484 aa11.52□□□□□ -0.57
SURF1-204ENST00000495952 RBM6P78332 1123 aaKnown RBP11.52□□□□□ -0.57
SURF1-204ENST00000495952 CAMK4Q16566 473 aa11.52□□□□□ -0.57
SURF1-204ENST00000495952 IMMTQ16891 758 aaKnown RBP11.52□□□□□ -0.57
SURF1-204ENST00000495952 NBPF14Q5TI25 921 aa11.52□□□□□ -0.57
SURF1-204ENST00000495952 ADALQ6DHV7 355 aa11.52□□□□□ -0.57
SURF1-204ENST00000495952 NBPF10Q6P3W6 841 aaKnown RBP11.52□□□□□ -0.57
SURF1-204ENST00000495952 CCDC186Q7Z3E2 898 aa11.52□□□□□ -0.57
SURF1-204ENST00000495952 CCAR1Q8IX12 1150 aaKnown RBP11.52□□□□□ -0.57
SURF1-204ENST00000495952 NBPF15Q8N660 670 aa11.52□□□□□ -0.57
SURF1-204ENST00000495952 KCNG4Q8TDN1 519 aa11.52□□□□□ -0.57
SURF1-204ENST00000495952 MRPS27Q92552 414 aaKnown RBP11.52□□□□□ -0.57
SURF1-204ENST00000495952 ZNF512BQ96KM6 892 aaPredicted RBP11.52□□□□□ -0.57
SURF1-204ENST00000495952 DNAJC25Q9H1X3 360 aa11.52□□□□□ -0.57
SURF1-204ENST00000495952 POLR3EQ9NVU0 708 aa11.52□□□□□ -0.57
SURF1-204ENST00000495952 IMPACTQ9P2X3 320 aa11.52□□□□□ -0.57
SURF1-204ENST00000495952 CLIP2Q9UDT6 1046 aa11.52□□□□□ -0.57
SURF1-204ENST00000495952 ZMYM6O95789 1325 aa11.52□□□□□ -0.57
SURF1-204ENST00000495952 A0A1B0GUL7 405 aa11.51□□□□□ -0.57
SURF1-204ENST00000495952 ATP5J2-PTCD1G3V325 749 aa11.51□□□□□ -0.57
SURF1-204ENST00000495952 PTCD1O75127 700 aaKnown RBP11.51□□□□□ -0.57
SURF1-204ENST00000495952 APOBRQ0VD83 1088 aa11.51□□□□□ -0.57
SURF1-204ENST00000495952 CCDC158Q5M9N0 1113 aa11.51□□□□□ -0.57
SURF1-204ENST00000495952 VSIG10Q8N0Z9 540 aa11.51□□□□□ -0.57
SURF1-204ENST00000495952 ZNF710Q8N1W2 664 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms