RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 MED23Q9ULK4 1368 aa15.49■□□□□ 0.07
SHROOM1-206ENST00000495680 H7C1W4 665 aa15.48■□□□□ 0.07
SHROOM1-206ENST00000495680 TWISTNBQ3B726 338 aaPredicted RBP15.48■□□□□ 0.07
SHROOM1-206ENST00000495680 NBPF9Q3BBW0 867 aa15.48■□□□□ 0.07
SHROOM1-206ENST00000495680 DACT2Q5SW24 774 aa15.48■□□□□ 0.07
SHROOM1-206ENST00000495680 PODNQ7Z5L7 613 aa15.48■□□□□ 0.07
SHROOM1-206ENST00000495680 RASAL3Q86YV0 1011 aa15.48■□□□□ 0.07
SHROOM1-206ENST00000495680 CSRNP1Q96S65 589 aa15.48■□□□□ 0.07
SHROOM1-206ENST00000495680 BSDC1Q9NW68 430 aaPredicted RBP15.48■□□□□ 0.07
SHROOM1-206ENST00000495680 TRPA1O75762 1119 aa15.47■□□□□ 0.07
SHROOM1-206ENST00000495680 SLC4A2P04920 1241 aa15.47■□□□□ 0.07
SHROOM1-206ENST00000495680 RGS19P49795 217 aa15.47■□□□□ 0.07
SHROOM1-206ENST00000495680 CCT4P50991 539 aaKnown RBP15.47■□□□□ 0.07
SHROOM1-206ENST00000495680 NEXNQ0ZGT2 675 aa15.47■□□□□ 0.07
SHROOM1-206ENST00000495680 STK31Q9BXU1 1019 aa15.47■□□□□ 0.07
SHROOM1-206ENST00000495680 AKAP11Q9UKA4 1901 aa15.47■□□□□ 0.07
SHROOM1-206ENST00000495680 PAPPA2Q9BXP8 1791 aa15.47■□□□□ 0.07
SHROOM1-206ENST00000495680 CASP7P55210 303 aa15.46■□□□□ 0.07
SHROOM1-206ENST00000495680 CCDC27Q2M243 656 aa15.46■□□□□ 0.07
SHROOM1-206ENST00000495680 FBXW7Q969H0 707 aa15.46■□□□□ 0.07
SHROOM1-206ENST00000495680 SAGE1Q9NXZ1 904 aa15.46■□□□□ 0.07
SHROOM1-206ENST00000495680 MLLT1Q03111 559 aaPredicted RBP15.45■□□□□ 0.06
SHROOM1-206ENST00000495680 GCKRQ14397 625 aa15.45■□□□□ 0.06
SHROOM1-206ENST00000495680 PITPNM2Q9BZ72 1349 aa15.44■□□□□ 0.06
SHROOM1-206ENST00000495680 UBE2Q2LH0YL09 131 aa15.44■□□□□ 0.06
SHROOM1-206ENST00000495680 SNAP23O00161 211 aa15.44■□□□□ 0.06
SHROOM1-206ENST00000495680 WNT10BO00744 389 aa15.44■□□□□ 0.06
SHROOM1-206ENST00000495680 SASH1O94885 1247 aa15.44■□□□□ 0.06
SHROOM1-206ENST00000495680 ITGA6P23229 1130 aa15.44■□□□□ 0.06
SHROOM1-206ENST00000495680 FLIIQ13045 1269 aa15.44■□□□□ 0.06
SHROOM1-206ENST00000495680 CHMP4AQ9BY43 222 aa15.44■□□□□ 0.06
SHROOM1-206ENST00000495680 ZNF804BA4D1E1 1349 aa15.43■□□□□ 0.06
SHROOM1-206ENST00000495680 FANCIQ9NVI1 1328 aa15.43■□□□□ 0.06
SHROOM1-206ENST00000495680 IGHMBP2P38935 993 aaKnown RBP15.43■□□□□ 0.06
SHROOM1-206ENST00000495680 STRIP1Q5VSL9 837 aa15.43■□□□□ 0.06
SHROOM1-206ENST00000495680 PLA2G12BQ9BX93 195 aa15.43■□□□□ 0.06
SHROOM1-206ENST00000495680 COA1Q9GZY4 146 aa15.43■□□□□ 0.06
SHROOM1-206ENST00000495680 CSF1RP07333 972 aa15.42■□□□□ 0.06
SHROOM1-206ENST00000495680 FKBP1BP68106 108 aa15.42■□□□□ 0.06
SHROOM1-206ENST00000495680 FKBP5Q13451 457 aaPredicted RBP15.42■□□□□ 0.06
SHROOM1-206ENST00000495680 KIAA0825Q8IV33 1275 aa15.42■□□□□ 0.06
SHROOM1-206ENST00000495680 DNAAF4Q8WXU2 420 aa15.42■□□□□ 0.06
SHROOM1-206ENST00000495680 LEMD3Q9Y2U8 911 aa15.42■□□□□ 0.06
SHROOM1-206ENST00000495680 SALL2Q9Y467 1007 aaPredicted RBP15.42■□□□□ 0.06
SHROOM1-206ENST00000495680 IL16Q14005 1332 aa15.42■□□□□ 0.06
SHROOM1-206ENST00000495680 IRS2Q9Y4H2 1338 aa15.42■□□□□ 0.06
SHROOM1-206ENST00000495680 A0A1B0GUL6 1792 aa15.41■□□□□ 0.06
SHROOM1-206ENST00000495680 VAMP4O75379 141 aa15.41■□□□□ 0.06
SHROOM1-206ENST00000495680 CHRNDQ07001 517 aa15.41■□□□□ 0.06
SHROOM1-206ENST00000495680 F6X3S4 739 aa15.4■□□□□ 0.06
SHROOM1-206ENST00000495680 TAF5LO75529 589 aa15.4■□□□□ 0.06
SHROOM1-206ENST00000495680 SOX10P56693 466 aa15.4■□□□□ 0.06
SHROOM1-206ENST00000495680 GTF2IP78347 998 aa15.4■□□□□ 0.06
SHROOM1-206ENST00000495680 MKRN3Q13064 507 aaKnown RBP15.4■□□□□ 0.06
SHROOM1-206ENST00000495680 TTLL5Q6EMB2 1281 aa15.4■□□□□ 0.06
SHROOM1-206ENST00000495680 OGFOD1Q8N543 542 aa15.4■□□□□ 0.06
SHROOM1-206ENST00000495680 HELBQ8NG08 1087 aaPredicted RBP15.4■□□□□ 0.06
SHROOM1-206ENST00000495680 LINS1Q8NG48 757 aa15.4■□□□□ 0.06
SHROOM1-206ENST00000495680 MPHOSPH8Q99549 860 aa15.4■□□□□ 0.06
SHROOM1-206ENST00000495680 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
SHROOM1-206ENST00000495680 FZD1Q9UP38 647 aa15.4■□□□□ 0.06
SHROOM1-206ENST00000495680 PCDHAC2Q9Y5I4 1007 aa15.4■□□□□ 0.06
SHROOM1-206ENST00000495680 MYO3BQ8WXR4 1341 aa15.4■□□□□ 0.06
SHROOM1-206ENST00000495680 FOXO4P98177 505 aa15.39■□□□□ 0.05
SHROOM1-206ENST00000495680 EXOSC9Q06265 439 aaKnown RBP15.39■□□□□ 0.05
SHROOM1-206ENST00000495680 PRKG1Q13976 671 aa15.39■□□□□ 0.05
SHROOM1-206ENST00000495680 TTLL12Q14166 644 aaPredicted RBP15.39■□□□□ 0.05
SHROOM1-206ENST00000495680 CERS5Q8N5B7 392 aa15.39■□□□□ 0.05
SHROOM1-206ENST00000495680 ZBED3Q96IU2 234 aaPredicted RBP15.39■□□□□ 0.05
SHROOM1-206ENST00000495680 ANKRD2Q9GZV1 360 aa15.39■□□□□ 0.05
SHROOM1-206ENST00000495680 CD209Q9NNX6 404 aa15.39■□□□□ 0.05
SHROOM1-206ENST00000495680 TBC1D8O95759 1140 aa15.38■□□□□ 0.05
SHROOM1-206ENST00000495680 EPHA10Q5JZY3 1008 aa15.38■□□□□ 0.05
SHROOM1-206ENST00000495680 MYH16Q9H6N6 1097 aa15.38■□□□□ 0.05
SHROOM1-206ENST00000495680 MRS2Q9HD23 443 aa15.38■□□□□ 0.05
SHROOM1-206ENST00000495680 CACNA1FO60840 1977 aa15.38■□□□□ 0.05
SHROOM1-206ENST00000495680 AOX1Q06278 1338 aa15.38■□□□□ 0.05
SHROOM1-206ENST00000495680 ANKRD18BA2A2Z9 1011 aa15.37■□□□□ 0.05
SHROOM1-206ENST00000495680 KCNJ4P48050 445 aa15.37■□□□□ 0.05
SHROOM1-206ENST00000495680 PTPN12Q05209 780 aaKnown RBP15.37■□□□□ 0.05
SHROOM1-206ENST00000495680 CTU1Q7Z7A3 348 aaKnown RBP15.37■□□□□ 0.05
SHROOM1-206ENST00000495680 JAG2Q9Y219 1238 aa15.37■□□□□ 0.05
SHROOM1-206ENST00000495680 BEND3Q5T5X7 828 aa15.36■□□□□ 0.05
SHROOM1-206ENST00000495680 REM2Q8IYK8 340 aaPredicted RBP15.36■□□□□ 0.05
SHROOM1-206ENST00000495680 ZNF296Q8WUU4 475 aaPredicted RBP15.36■□□□□ 0.05
SHROOM1-206ENST00000495680 ZNF594Q96JF6 807 aaPredicted RBP15.36■□□□□ 0.05
SHROOM1-206ENST00000495680 R3HDMLQ9H3Y0 253 aa15.36■□□□□ 0.05
SHROOM1-206ENST00000495680 CHMP3Q9Y3E7 222 aa15.36■□□□□ 0.05
SHROOM1-206ENST00000495680 SSC5DA1L4H1 1573 aa15.36■□□□□ 0.05
SHROOM1-206ENST00000495680 TNRC18O15417 2968 aaPredicted RBP15.36■□□□□ 0.05
SHROOM1-206ENST00000495680 F8W031 263 aaPredicted RBP15.35■□□□□ 0.05
SHROOM1-206ENST00000495680 SLC34A2O95436 690 aa15.35■□□□□ 0.05
SHROOM1-206ENST00000495680 NCBP3Q53F19 620 aaKnown RBP15.35■□□□□ 0.05
SHROOM1-206ENST00000495680 APOBEC3FQ8IUX4 373 aaKnown RBP15.35■□□□□ 0.05
SHROOM1-206ENST00000495680 PDE4DIPQ5VU43 2346 aa15.34■□□□□ 0.05
SHROOM1-206ENST00000495680 NF2P35240 595 aa15.34■□□□□ 0.05
SHROOM1-206ENST00000495680 TM4SF4P48230 202 aa15.34■□□□□ 0.05
SHROOM1-206ENST00000495680 IFIT5Q13325 482 aaKnown RBP15.34■□□□□ 0.05
SHROOM1-206ENST00000495680 LDLRAD1Q5T700 205 aa15.34■□□□□ 0.05
SHROOM1-206ENST00000495680 LMBR1LQ6UX01 489 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms