RNA–Protein interactions for RNA: ENST00000494764.1

RAPGEF3-213, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 783 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-213ENST00000494764 OGFOD1Q8N543 542 aa14.92□□□□□ -0.02
RAPGEF3-213ENST00000494764 LEMD3Q9Y2U8 911 aa14.92□□□□□ -0.02
RAPGEF3-213ENST00000494764 PSME4Q14997 1843 aa14.92□□□□□ -0.02
RAPGEF3-213ENST00000494764 TRPA1O75762 1119 aa14.91□□□□□ -0.02
RAPGEF3-213ENST00000494764 MPHOSPH8Q99549 860 aa14.91□□□□□ -0.02
RAPGEF3-213ENST00000494764 SPEF2Q9C093 1822 aa14.9□□□□□ -0.02
RAPGEF3-213ENST00000494764 MED23Q9ULK4 1368 aa14.9□□□□□ -0.02
RAPGEF3-213ENST00000494764 FKBP1BP68106 108 aa14.9□□□□□ -0.02
RAPGEF3-213ENST00000494764 MLLT1Q03111 559 aaPredicted RBP14.9□□□□□ -0.02
RAPGEF3-213ENST00000494764 GCKRQ14397 625 aa14.9□□□□□ -0.02
RAPGEF3-213ENST00000494764 FAM161AQ3B820 660 aa14.9□□□□□ -0.02
RAPGEF3-213ENST00000494764 STRIP1Q5VSL9 837 aa14.9□□□□□ -0.02
RAPGEF3-213ENST00000494764 REM2Q8IYK8 340 aaPredicted RBP14.9□□□□□ -0.02
RAPGEF3-213ENST00000494764 CSRNP1Q96S65 589 aa14.9□□□□□ -0.02
RAPGEF3-213ENST00000494764 ANKRD2Q9GZV1 360 aa14.9□□□□□ -0.02
RAPGEF3-213ENST00000494764 COA1Q9GZY4 146 aa14.9□□□□□ -0.02
RAPGEF3-213ENST00000494764 MYH16Q9H6N6 1097 aa14.9□□□□□ -0.02
RAPGEF3-213ENST00000494764 RNF186Q9NXI6 227 aa14.9□□□□□ -0.02
RAPGEF3-213ENST00000494764 SAGE1Q9NXZ1 904 aa14.9□□□□□ -0.02
RAPGEF3-213ENST00000494764 IL16Q14005 1332 aa14.9□□□□□ -0.02
RAPGEF3-213ENST00000494764 PITPNM2Q9BZ72 1349 aa14.9□□□□□ -0.02
RAPGEF3-213ENST00000494764 SLC10A3P09131 477 aa14.89□□□□□ -0.03
RAPGEF3-213ENST00000494764 ITGA6P23229 1130 aa14.89□□□□□ -0.03
RAPGEF3-213ENST00000494764 RGS19P49795 217 aa14.89□□□□□ -0.03
RAPGEF3-213ENST00000494764 FLIIQ13045 1269 aa14.89□□□□□ -0.03
RAPGEF3-213ENST00000494764 FKBP5Q13451 457 aaPredicted RBP14.89□□□□□ -0.03
RAPGEF3-213ENST00000494764 NBPF9Q3BBW0 867 aa14.89□□□□□ -0.03
RAPGEF3-213ENST00000494764 NCBP3Q53F19 620 aaKnown RBP14.89□□□□□ -0.03
RAPGEF3-213ENST00000494764 DACT2Q5SW24 774 aa14.89□□□□□ -0.03
RAPGEF3-213ENST00000494764 TTLL5Q6EMB2 1281 aa14.89□□□□□ -0.03
RAPGEF3-213ENST00000494764 MXD3Q9BW11 206 aa14.89□□□□□ -0.03
RAPGEF3-213ENST00000494764 PLA2G12BQ9BX93 195 aa14.89□□□□□ -0.03
RAPGEF3-213ENST00000494764 SCAF8Q9UPN6 1271 aaKnown RBP14.89□□□□□ -0.03
RAPGEF3-213ENST00000494764 SALL2Q9Y467 1007 aaPredicted RBP14.89□□□□□ -0.03
RAPGEF3-213ENST00000494764 ZNF609O15014 1411 aa14.89□□□□□ -0.03
RAPGEF3-213ENST00000494764 CACNA1FO60840 1977 aa14.89□□□□□ -0.03
RAPGEF3-213ENST00000494764 ZNF804BA4D1E1 1349 aa14.89□□□□□ -0.03
RAPGEF3-213ENST00000494764 MYO3BQ8WXR4 1341 aa14.89□□□□□ -0.03
RAPGEF3-213ENST00000494764 CSF1RP07333 972 aa14.88□□□□□ -0.03
RAPGEF3-213ENST00000494764 MMP14P50281 582 aa14.88□□□□□ -0.03
RAPGEF3-213ENST00000494764 TTLL12Q14166 644 aaPredicted RBP14.88□□□□□ -0.03
RAPGEF3-213ENST00000494764 DNAAF4Q8WXU2 420 aa14.88□□□□□ -0.03
RAPGEF3-213ENST00000494764 UBE2Q2LH0YL09 131 aa14.87□□□□□ -0.03
RAPGEF3-213ENST00000494764 NF2P35240 595 aa14.87□□□□□ -0.03
RAPGEF3-213ENST00000494764 KCNJ4P48050 445 aa14.87□□□□□ -0.03
RAPGEF3-213ENST00000494764 PRAMEF18Q5VWM3 479 aa14.87□□□□□ -0.03
RAPGEF3-213ENST00000494764 TXNRD3Q86VQ6 643 aa14.87□□□□□ -0.03
RAPGEF3-213ENST00000494764 LINS1Q8NG48 757 aa14.87□□□□□ -0.03
RAPGEF3-213ENST00000494764 HDAC9Q9UKV0 1011 aa14.87□□□□□ -0.03
RAPGEF3-213ENST00000494764 ANKRD18BA2A2Z9 1011 aa14.86□□□□□ -0.03
RAPGEF3-213ENST00000494764 WNT10BO00744 389 aa14.86□□□□□ -0.03
RAPGEF3-213ENST00000494764 VAMP4O75379 141 aa14.86□□□□□ -0.03
RAPGEF3-213ENST00000494764 RASAL3Q86YV0 1011 aa14.86□□□□□ -0.03
RAPGEF3-213ENST00000494764 WDR63Q8IWG1 891 aa14.86□□□□□ -0.03
RAPGEF3-213ENST00000494764 MRS2Q9HD23 443 aa14.86□□□□□ -0.03
RAPGEF3-213ENST00000494764 CASP7P55210 303 aa14.85□□□□□ -0.03
RAPGEF3-213ENST00000494764 GTF2IP78347 998 aa14.85□□□□□ -0.03
RAPGEF3-213ENST00000494764 CHRNDQ07001 517 aa14.85□□□□□ -0.03
RAPGEF3-213ENST00000494764 MOB2Q70IA6 237 aa14.85□□□□□ -0.03
RAPGEF3-213ENST00000494764 ANP32CO43423 234 aa14.84□□□□□ -0.03
RAPGEF3-213ENST00000494764 EXOSC9Q06265 439 aaKnown RBP14.84□□□□□ -0.03
RAPGEF3-213ENST00000494764 IFIT5Q13325 482 aaKnown RBP14.84□□□□□ -0.03
RAPGEF3-213ENST00000494764 KIAA0825Q8IV33 1275 aa14.84□□□□□ -0.03
RAPGEF3-213ENST00000494764 CHMP3Q9Y3E7 222 aa14.84□□□□□ -0.03
RAPGEF3-213ENST00000494764 FANCIQ9NVI1 1328 aa14.84□□□□□ -0.03
RAPGEF3-213ENST00000494764 CD209Q9NNX6 404 aa14.83□□□□□ -0.04
RAPGEF3-213ENST00000494764 PAPPA2Q9BXP8 1791 aa14.83□□□□□ -0.04
RAPGEF3-213ENST00000494764 TAF5LO75529 589 aa14.82□□□□□ -0.04
RAPGEF3-213ENST00000494764 SASH1O94885 1247 aa14.82□□□□□ -0.04
RAPGEF3-213ENST00000494764 KLRK1P26718 216 aa14.82□□□□□ -0.04
RAPGEF3-213ENST00000494764 PRKG1Q13976 671 aa14.82□□□□□ -0.04
RAPGEF3-213ENST00000494764 ARMC9Q7Z3E5 817 aa14.82□□□□□ -0.04
RAPGEF3-213ENST00000494764 APOBEC3FQ8IUX4 373 aaKnown RBP14.82□□□□□ -0.04
RAPGEF3-213ENST00000494764 HELBQ8NG08 1087 aaPredicted RBP14.82□□□□□ -0.04
RAPGEF3-213ENST00000494764 F6X3S4 739 aa14.81□□□□□ -0.04
RAPGEF3-213ENST00000494764 TBC1D8O95759 1140 aa14.81□□□□□ -0.04
RAPGEF3-213ENST00000494764 FOXO4P98177 505 aa14.81□□□□□ -0.04
RAPGEF3-213ENST00000494764 DLGAP5Q15398 846 aa14.81□□□□□ -0.04
RAPGEF3-213ENST00000494764 CCDC57Q2TAC2 916 aa14.81□□□□□ -0.04
RAPGEF3-213ENST00000494764 BEND3Q5T5X7 828 aa14.81□□□□□ -0.04
RAPGEF3-213ENST00000494764 CTU1Q7Z7A3 348 aaKnown RBP14.81□□□□□ -0.04
RAPGEF3-213ENST00000494764 SNAP23O00161 211 aa14.8□□□□□ -0.04
RAPGEF3-213ENST00000494764 PLIN1O60240 522 aa14.8□□□□□ -0.04
RAPGEF3-213ENST00000494764 TM4SF4P48230 202 aa14.8□□□□□ -0.04
RAPGEF3-213ENST00000494764 MKRN3Q13064 507 aaKnown RBP14.8□□□□□ -0.04
RAPGEF3-213ENST00000494764 TAF7LQ5H9L4 462 aa14.8□□□□□ -0.04
RAPGEF3-213ENST00000494764 LMBR1LQ6UX01 489 aa14.8□□□□□ -0.04
RAPGEF3-213ENST00000494764 ZNF804AQ7Z570 1209 aa14.8□□□□□ -0.04
RAPGEF3-213ENST00000494764 C9orf78Q9NZ63 289 aaPredicted RBP14.8□□□□□ -0.04
RAPGEF3-213ENST00000494764 PTPN12Q05209 780 aaKnown RBP14.79□□□□□ -0.04
RAPGEF3-213ENST00000494764 LDHAL6AQ6ZMR3 332 aa14.79□□□□□ -0.04
RAPGEF3-213ENST00000494764 C15orf52Q6ZUT6 534 aaKnown RBP14.79□□□□□ -0.04
RAPGEF3-213ENST00000494764 CNNM1Q9NRU3 951 aa14.79□□□□□ -0.04
RAPGEF3-213ENST00000494764 ZNF646O15015 1829 aaPredicted RBP14.78□□□□□ -0.04
RAPGEF3-213ENST00000494764 F8W031 263 aaPredicted RBP14.78□□□□□ -0.04
RAPGEF3-213ENST00000494764 MYO1BO43795 1136 aa14.78□□□□□ -0.04
RAPGEF3-213ENST00000494764 IL1R1P14778 569 aa14.78□□□□□ -0.04
RAPGEF3-213ENST00000494764 SREBF2Q12772 1141 aa14.78□□□□□ -0.04
RAPGEF3-213ENST00000494764 SLC10A4Q96EP9 437 aa14.78□□□□□ -0.04
RAPGEF3-213ENST00000494764 ZBED3Q96IU2 234 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms