RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 TRIM67Q6ZTA4 783 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 RETREG3Q86VR2 466 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 TICAM2Q86XR7 235 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 NUTM2AQ8IVF1 878 aaPredicted RBP3.22□□□□□ -1.89
MDC1-208ENST00000494654 C10orf67Q8IYJ2 551 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 CCDC24Q8N4L8 307 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 CCDC191Q8NCU4 936 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 NEK11Q8NG66 645 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 NECTIN2Q92692 538 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 EXOC4Q96A65 974 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 RUNDC1Q96C34 613 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 CHMP4CQ96CF2 233 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 IL17RAQ96F46 866 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 C16orf45Q96MC5 204 aaPredicted RBP3.22□□□□□ -1.89
MDC1-208ENST00000494654 CEP89Q96ST8 783 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 PRKD2Q9BZL6 878 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 CXorf56Q9H5V9 222 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 RGS17Q9UGC6 210 aaPredicted RBP3.22□□□□□ -1.89
MDC1-208ENST00000494654 JRKLQ9Y4A0 524 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 LRRFIP2Q9Y608 721 aaKnown RBP3.22□□□□□ -1.89
MDC1-208ENST00000494654 FHOD1Q9Y613 1164 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 USP54Q70EL1 1684 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 PHRF1Q9P1Y6 1649 aaKnown RBP3.22□□□□□ -1.89
MDC1-208ENST00000494654 PXDNLA1KZ92 1463 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 ATP10BO94823 1461 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 MYH10P35580 1976 aa3.21□□□□□ -1.89
MDC1-208ENST00000494654 IL16Q14005 1332 aa3.21□□□□□ -1.89
MDC1-208ENST00000494654 TTC21BQ7Z4L5 1316 aa3.21□□□□□ -1.89
MDC1-208ENST00000494654 ATXN2Q99700 1313 aaKnown RBP3.21□□□□□ -1.89
MDC1-208ENST00000494654 WDR33Q9C0J8 1336 aaKnown RBP3.21□□□□□ -1.89
MDC1-208ENST00000494654 DIP2AQ14689 1571 aa3.21□□□□□ -1.89
MDC1-208ENST00000494654 ATAD5Q96QE3 1844 aa3.21□□□□□ -1.89
MDC1-208ENST00000494654 WNK3Q9BYP7 1800 aa3.21□□□□□ -1.89
MDC1-208ENST00000494654 LMO7Q8WWI1 1683 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 POGZQ7Z3K3 1410 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 ARFGEF2Q9Y6D5 1785 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 ARHGAP5Q13017 1502 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 CCDC196A0A1B0GTZ2 297 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 SGSM2O43147 1006 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 C21orf2O43822 256 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 TUBB4AP04350 444 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 TRIM27P14373 513 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 JUNDP17535 347 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 PTGS1P23219 599 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 OAS2P29728 719 aaKnown RBP3.21□□□□□ -1.9
MDC1-208ENST00000494654 USP8P40818 1118 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 PLA2G4AP47712 749 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 KCNJ6P48051 423 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 UBE2HP62256 183 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 SRPK2P78362 688 aaKnown RBP3.21□□□□□ -1.9
MDC1-208ENST00000494654 SKOR1P84550 965 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 NBPF9Q3BBW0 867 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 C11orf91Q3C1V1 193 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 LINC01559Q495D7 138 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 MSS51Q4VC12 460 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 TTC22Q5TAA0 569 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 CEP135Q66GS9 1140 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 NBPF10Q6P3W6 841 aaKnown RBP3.21□□□□□ -1.9
MDC1-208ENST00000494654 POTEAQ6S8J7 498 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 ATF7IPQ6VMQ6 1270 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 LEKR1Q6ZMV7 388 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 MMS22LQ6ZRQ5 1243 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 FILIP1Q7Z7B0 1213 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 PLA2G4DQ86XP0 818 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 ITPRIPQ8IWB1 547 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.21□□□□□ -1.9
MDC1-208ENST00000494654 EFCAB13Q8IY85 973 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 ZGPATQ8N5A5 531 aaKnown RBP3.21□□□□□ -1.9
MDC1-208ENST00000494654 MSL3Q8N5Y2 521 aaKnown RBP3.21□□□□□ -1.9
MDC1-208ENST00000494654 JMYQ8N9B5 988 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 TDRD7Q8NHU6 1098 aaKnown RBP3.21□□□□□ -1.9
MDC1-208ENST00000494654 FAM200AQ8TCP9 573 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 PPM1EQ8WY54 764 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 SMARCE1Q969G3 411 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 ZBTB9Q96C00 473 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 LNPKQ9C0E8 428 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 DEF6Q9H4E7 631 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 ZSCAN16Q9H4T2 348 aaPredicted RBP3.21□□□□□ -1.9
MDC1-208ENST00000494654 ESF1Q9H501 851 aaKnown RBP3.21□□□□□ -1.9
MDC1-208ENST00000494654 ZBTB3Q9H5J0 574 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 L2HGDHQ9H9P8 463 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 ST7Q9NRC1 585 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 ZBTB40Q9NUA8 1239 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 IFT57Q9NWB7 429 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 ZNF215Q9UL58 517 aaPredicted RBP3.21□□□□□ -1.9
MDC1-208ENST00000494654 MSH6P52701 1360 aa3.21□□□□□ -1.9
MDC1-208ENST00000494654 KIF1AQ12756 1690 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 ABCC4O15439 1325 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 SPAG9O60271 1321 aaKnown RBP3.2□□□□□ -1.9
MDC1-208ENST00000494654 TTC41PQ6P2S7 1318 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 PHLPP2Q6ZVD8 1323 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 KIDINS220Q9ULH0 1771 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 CPSF1Q10570 1443 aaKnown RBP3.2□□□□□ -1.9
MDC1-208ENST00000494654 DLC1Q96QB1 1528 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 CCDC189A1A4V9 331 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 ZBTB7CA1YPR0 619 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 KLHL33A6NCF5 533 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 PATL2C9JE40 543 aaKnown RBP3.2□□□□□ -1.9
MDC1-208ENST00000494654 LCE2BO14633 110 aa3.2□□□□□ -1.9
MDC1-208ENST00000494654 PPP1R12AO14974 1030 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms