RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 DPY19L2Q6NUT2 758 aa13.81□□□□□ -0.2
APTX-230ENST00000494649 EXOC6Q8TAG9 804 aa13.81□□□□□ -0.2
APTX-230ENST00000494649 SSH3Q8TE77 659 aa13.81□□□□□ -0.2
APTX-230ENST00000494649 GLTPD2A6NH11 291 aa13.8□□□□□ -0.2
APTX-230ENST00000494649 CXCL9Q07325 125 aa13.8□□□□□ -0.2
APTX-230ENST00000494649 RRAGCQ9HB90 399 aa13.8□□□□□ -0.2
APTX-230ENST00000494649 ZBTB12Q9Y330 459 aaPredicted RBP13.8□□□□□ -0.2
APTX-230ENST00000494649 MED23Q9ULK4 1368 aa13.8□□□□□ -0.2
APTX-230ENST00000494649 IL15P40933 162 aaPredicted RBP13.79□□□□□ -0.2
APTX-230ENST00000494649 G3BP1Q13283 466 aaKnown RBP eCLIP13.79□□□□□ -0.2
APTX-230ENST00000494649 MXD3Q9BW11 206 aa13.79□□□□□ -0.2
APTX-230ENST00000494649 CEP126Q9P2H0 1117 aa13.79□□□□□ -0.2
APTX-230ENST00000494649 CIAO1O76071 339 aa13.79□□□□□ -0.2
APTX-230ENST00000494649 PCDHB15Q9Y5E8 787 aa13.79□□□□□ -0.2
APTX-230ENST00000494649 PSMD14O00487 310 aa13.78□□□□□ -0.2
APTX-230ENST00000494649 SASH1O94885 1247 aa13.78□□□□□ -0.2
APTX-230ENST00000494649 TIMM10P62072 90 aa13.78□□□□□ -0.2
APTX-230ENST00000494649 PUM3Q15397 648 aaKnown RBP13.78□□□□□ -0.2
APTX-230ENST00000494649 CHMP4BQ9H444 224 aaKnown RBP13.78□□□□□ -0.2
APTX-230ENST00000494649 KDM2BQ8NHM5 1336 aa13.78□□□□□ -0.2
APTX-230ENST00000494649 IRS2Q9Y4H2 1338 aa13.78□□□□□ -0.2
APTX-230ENST00000494649 SHTN1A0MZ66 631 aa13.78□□□□□ -0.2
APTX-230ENST00000494649 ADORA1P30542 326 aa13.78□□□□□ -0.2
APTX-230ENST00000494649 BCAMP50895 628 aa13.78□□□□□ -0.2
APTX-230ENST00000494649 UBE4AQ14139 1066 aa13.78□□□□□ -0.2
APTX-230ENST00000494649 ATP2B3Q16720 1220 aa13.78□□□□□ -0.2
APTX-230ENST00000494649 CIAPIN1Q6FI81 312 aa13.78□□□□□ -0.2
APTX-230ENST00000494649 VPS33BQ9H267 617 aa13.78□□□□□ -0.2
APTX-230ENST00000494649 SCN9AQ15858 1988 aa13.77□□□□□ -0.2
APTX-230ENST00000494649 VPS37DQ86XT2 251 aa13.77□□□□□ -0.21
APTX-230ENST00000494649 RPAP2Q8IXW5 612 aaPredicted RBP13.77□□□□□ -0.21
APTX-230ENST00000494649 NEUROD6Q96NK8 337 aa13.77□□□□□ -0.21
APTX-230ENST00000494649 CD209Q9NNX6 404 aa13.77□□□□□ -0.21
APTX-230ENST00000494649 ZC3H4Q9UPT8 1303 aaKnown RBP13.76□□□□□ -0.21
APTX-230ENST00000494649 GPC2Q8N158 579 aa13.76□□□□□ -0.21
APTX-230ENST00000494649 FAM84BQ96KN1 310 aaPredicted RBP13.76□□□□□ -0.21
APTX-230ENST00000494649 IL1RAPL2Q9NP60 686 aa13.76□□□□□ -0.21
APTX-230ENST00000494649 A0A1B0GUL7 405 aa13.76□□□□□ -0.21
APTX-230ENST00000494649 POTECB2RU33 542 aa13.76□□□□□ -0.21
APTX-230ENST00000494649 IFIT1P09914 478 aaKnown RBP13.76□□□□□ -0.21
APTX-230ENST00000494649 SLC5A1P13866 664 aa13.76□□□□□ -0.21
APTX-230ENST00000494649 FGFR2P21802 821 aa13.76□□□□□ -0.21
APTX-230ENST00000494649 GMPSP49915 693 aaPredicted RBP13.76□□□□□ -0.21
APTX-230ENST00000494649 GTF2IP78347 998 aa13.76□□□□□ -0.21
APTX-230ENST00000494649 ZNF804AQ7Z570 1209 aa13.76□□□□□ -0.21
APTX-230ENST00000494649 COA1Q9GZY4 146 aa13.76□□□□□ -0.21
APTX-230ENST00000494649 HMMRO75330 724 aa13.75□□□□□ -0.21
APTX-230ENST00000494649 FRAT2O75474 233 aaPredicted RBP13.75□□□□□ -0.21
APTX-230ENST00000494649 HIBADHP31937 336 aaKnown RBP13.75□□□□□ -0.21
APTX-230ENST00000494649 LPIN2Q92539 896 aa13.75□□□□□ -0.21
APTX-230ENST00000494649 FBXO3Q9UK99 471 aa13.75□□□□□ -0.21
APTX-230ENST00000494649 EPS15P42566 896 aa13.75□□□□□ -0.21
APTX-230ENST00000494649 SCNN1DP51172 638 aa13.75□□□□□ -0.21
APTX-230ENST00000494649 CHAF1AQ13111 956 aaPredicted RBP13.75□□□□□ -0.21
APTX-230ENST00000494649 CAVIN4Q5BKX8 364 aa13.75□□□□□ -0.21
APTX-230ENST00000494649 PODNQ7Z5L7 613 aa13.75□□□□□ -0.21
APTX-230ENST00000494649 POTEIP0CG38 1075 aa13.74□□□□□ -0.21
APTX-230ENST00000494649 POTEJP0CG39 1038 aa13.74□□□□□ -0.21
APTX-230ENST00000494649 TNIP1Q15025 636 aa13.74□□□□□ -0.21
APTX-230ENST00000494649 TTLL5Q6EMB2 1281 aa13.74□□□□□ -0.21
APTX-230ENST00000494649 USP17L3A6NCW0 530 aa13.73□□□□□ -0.21
APTX-230ENST00000494649 USP17L4A6NCW7 530 aa13.73□□□□□ -0.21
APTX-230ENST00000494649 F8W031 263 aaPredicted RBP13.73□□□□□ -0.21
APTX-230ENST00000494649 PHKA1P46020 1223 aa13.73□□□□□ -0.21
APTX-230ENST00000494649 EAPPQ56P03 285 aaPredicted RBP13.73□□□□□ -0.21
APTX-230ENST00000494649 USP17L1Q7RTZ2 530 aa13.73□□□□□ -0.21
APTX-230ENST00000494649 XAGE2Q96GT9 111 aa13.73□□□□□ -0.21
APTX-230ENST00000494649 CCDC8Q9H0W5 538 aaPredicted RBP13.73□□□□□ -0.21
APTX-230ENST00000494649 TLR7Q9NYK1 1049 aaKnown RBP13.73□□□□□ -0.21
APTX-230ENST00000494649 NOP58Q9Y2X3 529 aaKnown RBP13.73□□□□□ -0.21
APTX-230ENST00000494649 KIF3CO14782 793 aa13.73□□□□□ -0.21
APTX-230ENST00000494649 SMARCA5O60264 1052 aaPredicted RBP13.73□□□□□ -0.21
APTX-230ENST00000494649 RBM26Q5T8P6 1007 aaKnown RBP13.73□□□□□ -0.21
APTX-230ENST00000494649 C15orf52Q6ZUT6 534 aaKnown RBP13.73□□□□□ -0.21
APTX-230ENST00000494649 VEGFAP15692 232 aaPredicted RBP13.72□□□□□ -0.21
APTX-230ENST00000494649 LMOD1P29536 600 aaPredicted RBP13.72□□□□□ -0.21
APTX-230ENST00000494649 TNNI3KQ59H18 835 aa13.72□□□□□ -0.21
APTX-230ENST00000494649 FBXO33Q7Z6M2 555 aa13.72□□□□□ -0.21
APTX-230ENST00000494649 KIAA0825Q8IV33 1275 aa13.72□□□□□ -0.21
APTX-230ENST00000494649 MICALL2Q8IY33 904 aa13.72□□□□□ -0.21
APTX-230ENST00000494649 RHPN1Q8TCX5 695 aa13.72□□□□□ -0.21
APTX-230ENST00000494649 FPGT-TNNI3KV9GXZ4 949 aa13.72□□□□□ -0.21
APTX-230ENST00000494649 ZNF609O15014 1411 aa13.72□□□□□ -0.21
APTX-230ENST00000494649 EGFRP00533 1210 aa13.71□□□□□ -0.21
APTX-230ENST00000494649 IL1R1P14778 569 aa13.71□□□□□ -0.21
APTX-230ENST00000494649 C1QTNF8P60827 252 aa13.71□□□□□ -0.21
APTX-230ENST00000494649 DACT2Q5SW24 774 aa13.71□□□□□ -0.21
APTX-230ENST00000494649 GORABQ5T7V8 394 aa13.71□□□□□ -0.21
APTX-230ENST00000494649 CCDC102BQ68D86 513 aa13.71□□□□□ -0.21
APTX-230ENST00000494649 RSBN1LQ6PCB5 846 aaPredicted RBP13.71□□□□□ -0.21
APTX-230ENST00000494649 SAMD7Q7Z3H4 446 aa13.71□□□□□ -0.21
APTX-230ENST00000494649 EAF2Q96CJ1 260 aaPredicted RBP13.71□□□□□ -0.21
APTX-230ENST00000494649 DBNDD2Q9BQY9 259 aa13.71□□□□□ -0.21
APTX-230ENST00000494649 HACL1Q9UJ83 578 aa13.71□□□□□ -0.21
APTX-230ENST00000494649 AKAP2Q9Y2D5 859 aa13.71□□□□□ -0.21
APTX-230ENST00000494649 VIL1P09327 827 aaKnown RBP13.71□□□□□ -0.21
APTX-230ENST00000494649 EPHX2P34913 555 aa13.71□□□□□ -0.21
APTX-230ENST00000494649 PI16Q6UXB8 463 aa13.71□□□□□ -0.21
APTX-230ENST00000494649 AACSQ86V21 672 aa13.71□□□□□ -0.21
APTX-230ENST00000494649 CERS5Q8N5B7 392 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms