RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 SH3TC1Q8TE82 1336 aa14.62□□□□□ -0.07
TRIM59-206ENST00000494486 DDX60Q8IY21 1712 aaKnown RBP14.61□□□□□ -0.07
TRIM59-206ENST00000494486 TAF1CQ15572 869 aaPredicted RBP14.61□□□□□ -0.07
TRIM59-206ENST00000494486 CELF1Q92879 486 aaKnown RBP14.61□□□□□ -0.07
TRIM59-206ENST00000494486 PODXL2Q9NZ53 605 aa14.61□□□□□ -0.07
TRIM59-206ENST00000494486 TRMT112Q9UI30 125 aaKnown RBP14.61□□□□□ -0.07
TRIM59-206ENST00000494486 KNSTRNQ9Y448 316 aa14.61□□□□□ -0.07
TRIM59-206ENST00000494486 LRRC37AA6NMS7 1700 aa14.61□□□□□ -0.07
TRIM59-206ENST00000494486 CCL5P13501 91 aa14.6□□□□□ -0.07
TRIM59-206ENST00000494486 PODNQ7Z5L7 613 aa14.6□□□□□ -0.07
TRIM59-206ENST00000494486 RNF208Q9H0X6 261 aa14.6□□□□□ -0.07
TRIM59-206ENST00000494486 FZD1Q9UP38 647 aa14.6□□□□□ -0.07
TRIM59-206ENST00000494486 ANKRD36CQ5JPF3 1778 aa14.6□□□□□ -0.07
TRIM59-206ENST00000494486 U2SURPO15042 1029 aaKnown RBP14.59□□□□□ -0.07
TRIM59-206ENST00000494486 WDHD1O75717 1129 aaPredicted RBP14.59□□□□□ -0.07
TRIM59-206ENST00000494486 GJA5P36382 358 aa14.59□□□□□ -0.07
TRIM59-206ENST00000494486 LACTBP83111 547 aaPredicted RBP14.59□□□□□ -0.07
TRIM59-206ENST00000494486 TAF7Q15545 349 aaPredicted RBP14.59□□□□□ -0.07
TRIM59-206ENST00000494486 HSP90AB3PQ58FF7 597 aa14.59□□□□□ -0.07
TRIM59-206ENST00000494486 FAM109BQ6ICB4 259 aaPredicted RBP14.59□□□□□ -0.07
TRIM59-206ENST00000494486 MCM10Q7L590 875 aa14.59□□□□□ -0.07
TRIM59-206ENST00000494486 NLRP10Q86W26 655 aa14.59□□□□□ -0.07
TRIM59-206ENST00000494486 TDHQ8IZJ6 230 aa14.59□□□□□ -0.07
TRIM59-206ENST00000494486 ZNF646O15015 1829 aaPredicted RBP14.58□□□□□ -0.08
TRIM59-206ENST00000494486 UFL1O94874 794 aa14.58□□□□□ -0.08
TRIM59-206ENST00000494486 GRK4P32298 578 aa14.58□□□□□ -0.08
TRIM59-206ENST00000494486 SF3B3Q15393 1217 aaKnown RBP14.58□□□□□ -0.08
TRIM59-206ENST00000494486 U2AF1L4Q8WU68 220 aaKnown RBP14.58□□□□□ -0.08
TRIM59-206ENST00000494486 PHACTR3Q96KR7 559 aa14.58□□□□□ -0.08
TRIM59-206ENST00000494486 RAPGEFL1Q9UHV5 662 aa14.58□□□□□ -0.08
TRIM59-206ENST00000494486 GGA1Q9UJY5 639 aa14.58□□□□□ -0.08
TRIM59-206ENST00000494486 UNC80Q8N2C7 3258 aa14.58□□□□□ -0.08
TRIM59-206ENST00000494486 SCN9AQ15858 1988 aa14.57□□□□□ -0.08
TRIM59-206ENST00000494486 IREB2P48200 963 aaKnown RBP14.57□□□□□ -0.08
TRIM59-206ENST00000494486 RPS8P62241 208 aaKnown RBP14.57□□□□□ -0.08
TRIM59-206ENST00000494486 UBXN2AP68543 259 aa14.57□□□□□ -0.08
TRIM59-206ENST00000494486 MS4A4AQ96JQ5 239 aa14.57□□□□□ -0.08
TRIM59-206ENST00000494486 TRIM47Q96LD4 638 aa14.57□□□□□ -0.08
TRIM59-206ENST00000494486 GUCD1Q96NT3 240 aa14.57□□□□□ -0.08
TRIM59-206ENST00000494486 ARHGAP39Q9C0H5 1083 aa14.57□□□□□ -0.08
TRIM59-206ENST00000494486 DEFB129Q9H1M3 183 aa14.57□□□□□ -0.08
TRIM59-206ENST00000494486 COL1A1P02452 1464 aaPredicted RBP14.57□□□□□ -0.08
TRIM59-206ENST00000494486 HTATSF1O43719 755 aaKnown RBP14.56□□□□□ -0.08
TRIM59-206ENST00000494486 SASH1O94885 1247 aa14.56□□□□□ -0.08
TRIM59-206ENST00000494486 SGPL1O95470 568 aa14.56□□□□□ -0.08
TRIM59-206ENST00000494486 HOXD10P28358 340 aa14.56□□□□□ -0.08
TRIM59-206ENST00000494486 SUPT20HL1Q3ZLR7 823 aa14.56□□□□□ -0.08
TRIM59-206ENST00000494486 ANKRD13AQ8IZ07 590 aa14.56□□□□□ -0.08
TRIM59-206ENST00000494486 ANKIB1Q9P2G1 1089 aa14.56□□□□□ -0.08
TRIM59-206ENST00000494486 PPP2R3BQ9Y5P8 575 aa14.56□□□□□ -0.08
TRIM59-206ENST00000494486 MYO3BQ8WXR4 1341 aa14.56□□□□□ -0.08
TRIM59-206ENST00000494486 POTEB2H3BUK9 544 aa14.55□□□□□ -0.08
TRIM59-206ENST00000494486 TLR2O60603 784 aa14.55□□□□□ -0.08
TRIM59-206ENST00000494486 HELBQ8NG08 1087 aaPredicted RBP14.55□□□□□ -0.08
TRIM59-206ENST00000494486 RAET1EQ8TD07 263 aa14.55□□□□□ -0.08
TRIM59-206ENST00000494486 PNISRQ8TF01 805 aaKnown RBP14.55□□□□□ -0.08
TRIM59-206ENST00000494486 BRI3BPQ8WY22 251 aa14.55□□□□□ -0.08
TRIM59-206ENST00000494486 BIN2Q9UBW5 565 aaPredicted RBP14.55□□□□□ -0.08
TRIM59-206ENST00000494486 SRRDQ9UH36 339 aa14.55□□□□□ -0.08
TRIM59-206ENST00000494486 RIPOR2Q9Y4F9 1068 aa14.55□□□□□ -0.08
TRIM59-206ENST00000494486 LAMB1P07942 1786 aa14.55□□□□□ -0.08
TRIM59-206ENST00000494486 TAF1P21675 1872 aa14.55□□□□□ -0.08
TRIM59-206ENST00000494486 LAMA3Q16787 3333 aa14.54□□□□□ -0.08
TRIM59-206ENST00000494486 TNFRSF10AO00220 468 aa14.54□□□□□ -0.08
TRIM59-206ENST00000494486 DACT2Q5SW24 774 aa14.54□□□□□ -0.08
TRIM59-206ENST00000494486 OPTNQ96CV9 577 aa14.54□□□□□ -0.08
TRIM59-206ENST00000494486 MIS18AQ9NYP9 233 aa14.54□□□□□ -0.08
TRIM59-206ENST00000494486 IRS2Q9Y4H2 1338 aa14.54□□□□□ -0.08
TRIM59-206ENST00000494486 LAMB2P55268 1798 aa14.53□□□□□ -0.08
TRIM59-206ENST00000494486 CCL15-CCL14A0A0B4J2E2 113 aa14.53□□□□□ -0.08
TRIM59-206ENST00000494486 PRKAR2BP31323 418 aa14.53□□□□□ -0.08
TRIM59-206ENST00000494486 GTF2A2P52657 109 aa14.53□□□□□ -0.08
TRIM59-206ENST00000494486 CCL15Q16663 113 aa14.53□□□□□ -0.08
TRIM59-206ENST00000494486 AMER1Q5JTC6 1135 aaPredicted RBP14.53□□□□□ -0.08
TRIM59-206ENST00000494486 USP2O75604 605 aaPredicted RBP14.52□□□□□ -0.09
TRIM59-206ENST00000494486 TFRCP02786 760 aaKnown RBP14.52□□□□□ -0.09
TRIM59-206ENST00000494486 EIF4A1P60842 406 aaKnown RBP14.52□□□□□ -0.09
TRIM59-206ENST00000494486 DCTN1Q14203 1278 aa14.52□□□□□ -0.09
TRIM59-206ENST00000494486 FAM43AQ8N2R8 423 aa14.52□□□□□ -0.09
TRIM59-206ENST00000494486 ZBED3Q96IU2 234 aaPredicted RBP14.52□□□□□ -0.09
TRIM59-206ENST00000494486 UBE2OQ9C0C9 1292 aaKnown RBP14.52□□□□□ -0.09
TRIM59-206ENST00000494486 ZCCHC17Q9NP64 241 aaKnown RBP14.52□□□□□ -0.09
TRIM59-206ENST00000494486 LAMB4A4D0S4 1761 aa14.52□□□□□ -0.09
TRIM59-206ENST00000494486 MAGEA10P43363 369 aaPredicted RBP14.51□□□□□ -0.09
TRIM59-206ENST00000494486 STRIP1Q5VSL9 837 aa14.51□□□□□ -0.09
TRIM59-206ENST00000494486 LRP10Q7Z4F1 713 aa14.51□□□□□ -0.09
TRIM59-206ENST00000494486 ELP3Q9H9T3 547 aa14.51□□□□□ -0.09
TRIM59-206ENST00000494486 ZMYND8Q9ULU4 1186 aaPredicted RBP14.51□□□□□ -0.09
TRIM59-206ENST00000494486 PSMC4P43686 418 aa14.5□□□□□ -0.09
TRIM59-206ENST00000494486 NECAB2Q7Z6G3 386 aa14.5□□□□□ -0.09
TRIM59-206ENST00000494486 C7orf61Q8IZ16 206 aa14.5□□□□□ -0.09
TRIM59-206ENST00000494486 MAFAQ8NHW3 353 aaPredicted RBP14.5□□□□□ -0.09
TRIM59-206ENST00000494486 THUMPD2Q9BTF0 503 aaKnown RBP14.5□□□□□ -0.09
TRIM59-206ENST00000494486 MXD3Q9BW11 206 aa14.5□□□□□ -0.09
TRIM59-206ENST00000494486 RSPH6AQ9H0K4 717 aa14.5□□□□□ -0.09
TRIM59-206ENST00000494486 UNC93B1Q9H1C4 597 aa14.5□□□□□ -0.09
TRIM59-206ENST00000494486 SSC5DA1L4H1 1573 aa14.5□□□□□ -0.09
TRIM59-206ENST00000494486 TMEM265A0A087WTH1 108 aa14.49□□□□□ -0.09
TRIM59-206ENST00000494486 OSBPP22059 807 aa14.49□□□□□ -0.09
TRIM59-206ENST00000494486 ATP2B4P23634 1241 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms