RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 KCNQ5Q9NR82 932 aa8.74□□□□□ -1.01
TOP3A-207ENST00000493648 CNOT7Q9UIV1 285 aaKnown RBP8.74□□□□□ -1.01
TOP3A-207ENST00000493648 MED23Q9ULK4 1368 aa8.73□□□□□ -1.01
TOP3A-207ENST00000493648 USP17L3A6NCW0 530 aa8.73□□□□□ -1.01
TOP3A-207ENST00000493648 USP17L4A6NCW7 530 aa8.73□□□□□ -1.01
TOP3A-207ENST00000493648 WTIPA6NIX2 430 aaPredicted RBP8.73□□□□□ -1.01
TOP3A-207ENST00000493648 TRIM27P14373 513 aa8.73□□□□□ -1.01
TOP3A-207ENST00000493648 C15orf52Q6ZUT6 534 aaKnown RBP8.73□□□□□ -1.01
TOP3A-207ENST00000493648 USP17L1Q7RTZ2 530 aa8.73□□□□□ -1.01
TOP3A-207ENST00000493648 CNTROBQ8N137 903 aa8.73□□□□□ -1.01
TOP3A-207ENST00000493648 CLUAP1Q96AJ1 413 aa8.73□□□□□ -1.01
TOP3A-207ENST00000493648 PUS3Q9BZE2 481 aaKnown RBP8.73□□□□□ -1.01
TOP3A-207ENST00000493648 ZBTB12Q9Y330 459 aaPredicted RBP8.73□□□□□ -1.01
TOP3A-207ENST00000493648 MROH5Q6ZUA9 1318 aa8.73□□□□□ -1.01
TOP3A-207ENST00000493648 UBE4AQ14139 1066 aa8.72□□□□□ -1.01
TOP3A-207ENST00000493648 MAP1SQ66K74 1059 aaPredicted RBP8.72□□□□□ -1.01
TOP3A-207ENST00000493648 RSBN1LQ6PCB5 846 aaPredicted RBP8.72□□□□□ -1.01
TOP3A-207ENST00000493648 ZNF804AQ7Z570 1209 aa8.72□□□□□ -1.01
TOP3A-207ENST00000493648 TXNRD3Q86VQ6 643 aa8.72□□□□□ -1.01
TOP3A-207ENST00000493648 MICALL2Q8IY33 904 aa8.72□□□□□ -1.01
TOP3A-207ENST00000493648 AGBL3Q8NEM8 1001 aa8.72□□□□□ -1.01
TOP3A-207ENST00000493648 ZC3H15Q8WU90 426 aaKnown RBP8.72□□□□□ -1.01
TOP3A-207ENST00000493648 RIPOR2Q9Y4F9 1068 aa8.72□□□□□ -1.01
TOP3A-207ENST00000493648 LRRFIP2Q9Y608 721 aaKnown RBP8.72□□□□□ -1.01
TOP3A-207ENST00000493648 SNAP23O00161 211 aa8.71□□□□□ -1.02
TOP3A-207ENST00000493648 ITGBL1O95965 494 aaPredicted RBP8.71□□□□□ -1.02
TOP3A-207ENST00000493648 MS4A1P11836 297 aa8.71□□□□□ -1.02
TOP3A-207ENST00000493648 METTL24Q5JXM2 366 aa8.71□□□□□ -1.02
TOP3A-207ENST00000493648 RBM26Q5T8P6 1007 aaKnown RBP8.71□□□□□ -1.02
TOP3A-207ENST00000493648 STRIP1Q5VSL9 837 aa8.71□□□□□ -1.02
TOP3A-207ENST00000493648 TTLL5Q6EMB2 1281 aa8.71□□□□□ -1.02
TOP3A-207ENST00000493648 FTSJ3Q8IY81 847 aaKnown RBP8.71□□□□□ -1.02
TOP3A-207ENST00000493648 DZIP1LQ8IYY4 767 aaKnown RBP8.71□□□□□ -1.02
TOP3A-207ENST00000493648 FBXW7Q969H0 707 aa8.71□□□□□ -1.02
TOP3A-207ENST00000493648 MEIS3Q99687 375 aa8.71□□□□□ -1.02
TOP3A-207ENST00000493648 CD209Q9NNX6 404 aa8.71□□□□□ -1.02
TOP3A-207ENST00000493648 FBXO3Q9UK99 471 aa8.71□□□□□ -1.02
TOP3A-207ENST00000493648 EYA2O00167 538 aa8.7□□□□□ -1.02
TOP3A-207ENST00000493648 PDE8BO95263 885 aa8.7□□□□□ -1.02
TOP3A-207ENST00000493648 GNAI2P04899 355 aa8.7□□□□□ -1.02
TOP3A-207ENST00000493648 USP17L8P0C7I0 530 aa8.7□□□□□ -1.02
TOP3A-207ENST00000493648 KLRK1P26718 216 aa8.7□□□□□ -1.02
TOP3A-207ENST00000493648 RFX5P48382 616 aaPredicted RBP8.7□□□□□ -1.02
TOP3A-207ENST00000493648 MMP14P50281 582 aa8.7□□□□□ -1.02
TOP3A-207ENST00000493648 HIRAP54198 1017 aaPredicted RBP8.7□□□□□ -1.02
TOP3A-207ENST00000493648 GTF2IP78347 998 aa8.7□□□□□ -1.02
TOP3A-207ENST00000493648 PTPN12Q05209 780 aaKnown RBP8.7□□□□□ -1.02
TOP3A-207ENST00000493648 LRRC24Q50LG9 513 aa8.7□□□□□ -1.02
TOP3A-207ENST00000493648 DACT2Q5SW24 774 aa8.7□□□□□ -1.02
TOP3A-207ENST00000493648 SAMD7Q7Z3H4 446 aa8.7□□□□□ -1.02
TOP3A-207ENST00000493648 OGFOD1Q8N543 542 aa8.7□□□□□ -1.02
TOP3A-207ENST00000493648 TMEM57Q8N5G2 664 aa8.7□□□□□ -1.02
TOP3A-207ENST00000493648 KLHDC4Q8TBB5 520 aa8.7□□□□□ -1.02
TOP3A-207ENST00000493648 PGAP2Q9UHJ9 254 aa8.7□□□□□ -1.02
TOP3A-207ENST00000493648 TNNQ9UQP3 1299 aa8.7□□□□□ -1.02
TOP3A-207ENST00000493648 MYO3BQ8WXR4 1341 aa8.7□□□□□ -1.02
TOP3A-207ENST00000493648 SCN9AQ15858 1988 aa8.7□□□□□ -1.02
TOP3A-207ENST00000493648 SHTN1A0MZ66 631 aa8.69□□□□□ -1.02
TOP3A-207ENST00000493648 SRGAP3O43295 1099 aa8.69□□□□□ -1.02
TOP3A-207ENST00000493648 CIAO1O76071 339 aa8.69□□□□□ -1.02
TOP3A-207ENST00000493648 SASH1O94885 1247 aa8.69□□□□□ -1.02
TOP3A-207ENST00000493648 IL1R1P14778 569 aa8.69□□□□□ -1.02
TOP3A-207ENST00000493648 HIBADHP31937 336 aaKnown RBP8.69□□□□□ -1.02
TOP3A-207ENST00000493648 TBC1D10BQ4KMP7 808 aaPredicted RBP8.69□□□□□ -1.02
TOP3A-207ENST00000493648 CAVIN4Q5BKX8 364 aa8.69□□□□□ -1.02
TOP3A-207ENST00000493648 CDC37L1Q7L3B6 337 aa8.69□□□□□ -1.02
TOP3A-207ENST00000493648 VPS37DQ86XT2 251 aa8.69□□□□□ -1.02
TOP3A-207ENST00000493648 DCPSQ96C86 337 aaKnown RBP8.69□□□□□ -1.02
TOP3A-207ENST00000493648 GMLQ99445 158 aa8.69□□□□□ -1.02
TOP3A-207ENST00000493648 CREBZFQ9NS37 354 aa8.69□□□□□ -1.02
TOP3A-207ENST00000493648 CEP126Q9P2H0 1117 aa8.69□□□□□ -1.02
TOP3A-207ENST00000493648 RCAN3Q9UKA8 241 aa8.69□□□□□ -1.02
TOP3A-207ENST00000493648 HDAC9Q9UKV0 1011 aa8.69□□□□□ -1.02
TOP3A-207ENST00000493648 PASKQ96RG2 1323 aa8.69□□□□□ -1.02
TOP3A-207ENST00000493648 IRS2Q9Y4H2 1338 aa8.69□□□□□ -1.02
TOP3A-207ENST00000493648 ADAMTSL1Q8N6G6 1762 aa8.68□□□□□ -1.02
TOP3A-207ENST00000493648 PSME4Q14997 1843 aa8.68□□□□□ -1.02
TOP3A-207ENST00000493648 TMEM88BA6NKF7 163 aa8.68□□□□□ -1.02
TOP3A-207ENST00000493648 IFIT1P09914 478 aaKnown RBP8.68□□□□□ -1.02
TOP3A-207ENST00000493648 IL15P40933 162 aaPredicted RBP8.68□□□□□ -1.02
TOP3A-207ENST00000493648 GYG1P46976 350 aa8.68□□□□□ -1.02
TOP3A-207ENST00000493648 ZNF280AP59817 542 aaPredicted RBP8.68□□□□□ -1.02
TOP3A-207ENST00000493648 FKBP1AP62942 108 aaKnown RBP8.68□□□□□ -1.02
TOP3A-207ENST00000493648 HTRA3P83110 453 aa8.68□□□□□ -1.02
TOP3A-207ENST00000493648 MTX1Q13505 466 aa8.68□□□□□ -1.02
TOP3A-207ENST00000493648 PUM3Q15397 648 aaKnown RBP8.68□□□□□ -1.02
TOP3A-207ENST00000493648 KIF4BQ2VIQ3 1234 aa8.68□□□□□ -1.02
TOP3A-207ENST00000493648 ITPRIPQ8IWB1 547 aa8.68□□□□□ -1.02
TOP3A-207ENST00000493648 DNAJC5GQ8N7S2 189 aa8.68□□□□□ -1.02
TOP3A-207ENST00000493648 TRPM4Q8TD43 1214 aa8.68□□□□□ -1.02
TOP3A-207ENST00000493648 FAM84BQ96KN1 310 aaPredicted RBP8.68□□□□□ -1.02
TOP3A-207ENST00000493648 SIL1Q9H173 461 aa8.68□□□□□ -1.02
TOP3A-207ENST00000493648 MYOZ2Q9NPC6 264 aa8.68□□□□□ -1.02
TOP3A-207ENST00000493648 COPRSQ9NQ92 184 aa8.68□□□□□ -1.02
TOP3A-207ENST00000493648 ZNF609O15014 1411 aa8.67□□□□□ -1.02
TOP3A-207ENST00000493648 ZBTB7BO15156 539 aaPredicted RBP8.67□□□□□ -1.02
TOP3A-207ENST00000493648 FRAT2O75474 233 aaPredicted RBP8.67□□□□□ -1.02
TOP3A-207ENST00000493648 SLC5A1P13866 664 aa8.67□□□□□ -1.02
TOP3A-207ENST00000493648 SCARF1Q14162 830 aa8.67□□□□□ -1.02
TOP3A-207ENST00000493648 CHRDL2Q6WN34 429 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms