RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 MMS22LQ6ZRQ5 1243 aa7.82□□□□□ -1.16
EWSR1-220ENST00000493426 CCDC91Q7Z6B0 441 aa7.82□□□□□ -1.16
EWSR1-220ENST00000493426 ERC1Q8IUD2 1116 aa7.82□□□□□ -1.16
EWSR1-220ENST00000493426 CCAR1Q8IX12 1150 aaKnown RBP7.82□□□□□ -1.16
EWSR1-220ENST00000493426 EFCAB13Q8IY85 973 aa7.82□□□□□ -1.16
EWSR1-220ENST00000493426 ELOA2Q8IYF1 753 aaPredicted RBP7.82□□□□□ -1.16
EWSR1-220ENST00000493426 C10orf67Q8IYJ2 551 aa7.82□□□□□ -1.16
EWSR1-220ENST00000493426 FMR1NBQ8N0W7 255 aaPredicted RBP7.82□□□□□ -1.16
EWSR1-220ENST00000493426 LRRN4CLQ8ND94 238 aa7.82□□□□□ -1.16
EWSR1-220ENST00000493426 COG3Q96JB2 828 aa7.82□□□□□ -1.16
EWSR1-220ENST00000493426 CARD6Q9BX69 1037 aa7.82□□□□□ -1.16
EWSR1-220ENST00000493426 PARD6BQ9BYG5 372 aa7.82□□□□□ -1.16
EWSR1-220ENST00000493426 GBP3Q9H0R5 595 aa7.82□□□□□ -1.16
EWSR1-220ENST00000493426 A1CFQ9NQ94 594 aaKnown RBP7.82□□□□□ -1.16
EWSR1-220ENST00000493426 ECHDC1Q9NTX5 307 aa7.82□□□□□ -1.16
EWSR1-220ENST00000493426 RBM8AQ9Y5S9 174 aaKnown RBP7.82□□□□□ -1.16
EWSR1-220ENST00000493426 MRFAP1Q9Y605 127 aa7.82□□□□□ -1.16
EWSR1-220ENST00000493426 MAP2P11137 1827 aaKnown RBP7.82□□□□□ -1.16
EWSR1-220ENST00000493426 C3P01024 1663 aa7.82□□□□□ -1.16
EWSR1-220ENST00000493426 MINK1Q8N4C8 1332 aaPredicted RBP7.81□□□□□ -1.16
EWSR1-220ENST00000493426 CACNA1FO60840 1977 aa7.81□□□□□ -1.16
EWSR1-220ENST00000493426 EIF3CLB5ME19 914 aaKnown RBP7.81□□□□□ -1.16
EWSR1-220ENST00000493426 F6X3S4 739 aa7.81□□□□□ -1.16
EWSR1-220ENST00000493426 SRGAP3O43295 1099 aa7.81□□□□□ -1.16
EWSR1-220ENST00000493426 SURF6O75683 361 aaKnown RBP7.81□□□□□ -1.16
EWSR1-220ENST00000493426 EIF3JO75822 258 aaKnown RBP7.81□□□□□ -1.16
EWSR1-220ENST00000493426 SMC2O95347 1197 aa7.81□□□□□ -1.16
EWSR1-220ENST00000493426 NUBP1P53384 320 aa7.81□□□□□ -1.16
EWSR1-220ENST00000493426 EIF5P55010 431 aaKnown RBP7.81□□□□□ -1.16
EWSR1-220ENST00000493426 NLRP12P59046 1061 aa7.81□□□□□ -1.16
EWSR1-220ENST00000493426 TOB2Q14106 344 aaPredicted RBP7.81□□□□□ -1.16
EWSR1-220ENST00000493426 BEND6Q5SZJ8 279 aaPredicted RBP7.81□□□□□ -1.16
EWSR1-220ENST00000493426 GORABQ5T7V8 394 aa7.81□□□□□ -1.16
EWSR1-220ENST00000493426 CWC27Q6UX04 472 aaKnown RBP7.81□□□□□ -1.16
EWSR1-220ENST00000493426 HDXQ7Z353 690 aa7.81□□□□□ -1.16
EWSR1-220ENST00000493426 PPP1R42Q7Z4L9 355 aa7.81□□□□□ -1.16
EWSR1-220ENST00000493426 NUTM1Q86Y26 1132 aa7.81□□□□□ -1.16
EWSR1-220ENST00000493426 NECAB1Q8N987 351 aa7.81□□□□□ -1.16
EWSR1-220ENST00000493426 GOLGA1Q92805 767 aa7.81□□□□□ -1.16
EWSR1-220ENST00000493426 EIF3CQ99613 913 aaKnown RBP7.81□□□□□ -1.16
EWSR1-220ENST00000493426 XPO4Q9C0E2 1151 aaKnown RBP7.81□□□□□ -1.16
EWSR1-220ENST00000493426 DEF6Q9H4E7 631 aa7.81□□□□□ -1.16
EWSR1-220ENST00000493426 VIPAS39Q9H9C1 493 aa7.81□□□□□ -1.16
EWSR1-220ENST00000493426 ZCCHC17Q9NP64 241 aaKnown RBP7.81□□□□□ -1.16
EWSR1-220ENST00000493426 MED4Q9NPJ6 270 aa7.81□□□□□ -1.16
EWSR1-220ENST00000493426 L1RE1Q9UN81 338 aa7.81□□□□□ -1.16
EWSR1-220ENST00000493426 RFX7Q2KHR2 1363 aa7.81□□□□□ -1.16
EWSR1-220ENST00000493426 ALKQ9UM73 1620 aa7.81□□□□□ -1.16
EWSR1-220ENST00000493426 XRN1Q8IZH2 1706 aaKnown RBP7.81□□□□□ -1.16
EWSR1-220ENST00000493426 NPHP4O75161 1426 aaPredicted RBP7.8□□□□□ -1.16
EWSR1-220ENST00000493426 FAM237AA0A1B0GTK4 181 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 CCDC196A0A1B0GTZ2 297 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 STX10O60499 249 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 PFKFB2O60825 505 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 PPFIA4O75335 1185 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 ERLIN1O75477 346 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 ALDH1L1O75891 902 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 URI1O94763 535 aaPredicted RBP7.8□□□□□ -1.16
EWSR1-220ENST00000493426 PPP2R3AQ06190 1150 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 TBX2Q13207 712 aaPredicted RBP7.8□□□□□ -1.16
EWSR1-220ENST00000493426 EIF4A2Q14240 407 aaKnown RBP7.8□□□□□ -1.16
EWSR1-220ENST00000493426 FAM173BQ6P4H8 233 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 SLC4A10Q6U841 1118 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 PAXIP1Q6ZW49 1069 aaPredicted RBP7.8□□□□□ -1.16
EWSR1-220ENST00000493426 FERMT3Q86UX7 667 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 PACS2Q86VP3 889 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 HOMER1Q86YM7 354 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 VSTM4Q8IW00 320 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 FBXL16Q8N461 479 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 CEP112Q8N8E3 955 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 CEP120Q8N960 986 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 FAM71BQ8TC56 605 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 STAG1Q8WVM7 1258 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 SECISBP2LQ93073 1101 aaKnown RBP7.8□□□□□ -1.16
EWSR1-220ENST00000493426 GPATCH3Q96I76 525 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 TRERF1Q96PN7 1200 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 AGXT2Q9BYV1 514 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 TSPYL2Q9H2G4 693 aaPredicted RBP7.8□□□□□ -1.16
EWSR1-220ENST00000493426 IL1RAPL2Q9NP60 686 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 DONSONQ9NYP3 566 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 RTEL1Q9NZ71 1219 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 KIAA1468Q9P260 1216 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 ZRANB1Q9UGI0 708 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 TUBE1Q9UJT0 475 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 SPG7Q9UQ90 795 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 KDRP35968 1356 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 USP31Q70CQ4 1352 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 MED23Q9ULK4 1368 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 A2ML1A8K2U0 1454 aa7.8□□□□□ -1.16
EWSR1-220ENST00000493426 RGPD1P0DJD0 1748 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 NUTM2FA1L443 756 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 VWA3AA6NCI4 1184 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 A6NNZ2 444 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 H3BQF6 201 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 NPHP1O15259 732 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 FANCGO15287 622 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 SEC31AO94979 1220 aaKnown RBP7.79□□□□□ -1.16
EWSR1-220ENST00000493426 YEATS4O95619 227 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 HOXB7P09629 217 aa7.79□□□□□ -1.16
EWSR1-220ENST00000493426 CPA1P15085 419 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms