RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 TLL2Q9Y6L7 1015 aa17.1■□□□□ 0.33
IRF1-210ENST00000493208 VEGFBP49765 207 aa17.09■□□□□ 0.33
IRF1-210ENST00000493208 IFFO2Q5TF58 517 aa17.09■□□□□ 0.33
IRF1-210ENST00000493208 MRPL50Q8N5N7 158 aaKnown RBP17.09■□□□□ 0.33
IRF1-210ENST00000493208 C2orf69Q8N8R5 385 aa17.09■□□□□ 0.33
IRF1-210ENST00000493208 WDR33Q9C0J8 1336 aaKnown RBP17.09■□□□□ 0.33
IRF1-210ENST00000493208 ZNF280AP59817 542 aaPredicted RBP17.08■□□□□ 0.32
IRF1-210ENST00000493208 FOXO4P98177 505 aa17.08■□□□□ 0.32
IRF1-210ENST00000493208 TTLL5Q6EMB2 1281 aa17.08■□□□□ 0.32
IRF1-210ENST00000493208 GLIS2Q9BZE0 524 aaPredicted RBP17.08■□□□□ 0.32
IRF1-210ENST00000493208 API5Q9BZZ5 524 aaKnown RBP17.08■□□□□ 0.32
IRF1-210ENST00000493208 MYOZ2Q9NPC6 264 aa17.08■□□□□ 0.32
IRF1-210ENST00000493208 MROH5Q6ZUA9 1318 aa17.07■□□□□ 0.32
IRF1-210ENST00000493208 PITPNM2Q9BZ72 1349 aa17.07■□□□□ 0.32
IRF1-210ENST00000493208 TRAF5O00463 557 aa17.07■□□□□ 0.32
IRF1-210ENST00000493208 MAP2K2P36507 400 aa17.07■□□□□ 0.32
IRF1-210ENST00000493208 CTCFP49711 727 aaPredicted RBP17.07■□□□□ 0.32
IRF1-210ENST00000493208 USP48Q86UV5 1035 aa17.07■□□□□ 0.32
IRF1-210ENST00000493208 CAPNS2Q96L46 248 aa17.07■□□□□ 0.32
IRF1-210ENST00000493208 KIF16BQ96L93 1317 aa17.06■□□□□ 0.32
IRF1-210ENST00000493208 NF2P35240 595 aa17.06■□□□□ 0.32
IRF1-210ENST00000493208 HIRAP54198 1017 aaPredicted RBP17.06■□□□□ 0.32
IRF1-210ENST00000493208 C15orf52Q6ZUT6 534 aaKnown RBP17.06■□□□□ 0.32
IRF1-210ENST00000493208 SSH1Q8WYL5 1049 aa17.06■□□□□ 0.32
IRF1-210ENST00000493208 KCNQ5Q9NR82 932 aa17.06■□□□□ 0.32
IRF1-210ENST00000493208 GGA3Q9NZ52 723 aa17.06■□□□□ 0.32
IRF1-210ENST00000493208 UTYO14607 1347 aa17.05■□□□□ 0.32
IRF1-210ENST00000493208 CA12O43570 354 aa17.05■□□□□ 0.32
IRF1-210ENST00000493208 MYO1BO43795 1136 aa17.05■□□□□ 0.32
IRF1-210ENST00000493208 GRM1Q13255 1194 aa17.05■□□□□ 0.32
IRF1-210ENST00000493208 SAPCD2Q86UD0 394 aa17.05■□□□□ 0.32
IRF1-210ENST00000493208 VPS37DQ86XT2 251 aa17.05■□□□□ 0.32
IRF1-210ENST00000493208 IPO8O15397 1037 aaKnown RBP17.04■□□□□ 0.32
IRF1-210ENST00000493208 FKBP1BP68106 108 aa17.04■□□□□ 0.32
IRF1-210ENST00000493208 UBE4AQ14139 1066 aa17.04■□□□□ 0.32
IRF1-210ENST00000493208 SCARF1Q14162 830 aa17.04■□□□□ 0.32
IRF1-210ENST00000493208 CST9Q5W186 159 aa17.04■□□□□ 0.32
IRF1-210ENST00000493208 CCDC102AQ96A19 550 aa17.04■□□□□ 0.32
IRF1-210ENST00000493208 CD209Q9NNX6 404 aa17.04■□□□□ 0.32
IRF1-210ENST00000493208 PLIN1O60240 522 aa17.03■□□□□ 0.32
IRF1-210ENST00000493208 HUNKP57058 714 aa17.03■□□□□ 0.32
IRF1-210ENST00000493208 NOGQ13253 232 aa17.03■□□□□ 0.32
IRF1-210ENST00000493208 CAVIN4Q5BKX8 364 aa17.03■□□□□ 0.32
IRF1-210ENST00000493208 DACT2Q5SW24 774 aa17.03■□□□□ 0.32
IRF1-210ENST00000493208 GBA2Q9HCG7 927 aaPredicted RBP17.03■□□□□ 0.32
IRF1-210ENST00000493208 COL4A1P02462 1669 aa17.03■□□□□ 0.32
IRF1-210ENST00000493208 TRPM7Q96QT4 1865 aa17.02■□□□□ 0.32
IRF1-210ENST00000493208 TAF5LO75529 589 aa17.02■□□□□ 0.32
IRF1-210ENST00000493208 NBPF7P0C2Y1 421 aaPredicted RBP17.02■□□□□ 0.32
IRF1-210ENST00000493208 UBTFL1P0CB47 393 aaPredicted RBP17.02■□□□□ 0.32
IRF1-210ENST00000493208 BRPF1P55201 1214 aaPredicted RBP17.02■□□□□ 0.32
IRF1-210ENST00000493208 FKBP1AP62942 108 aaKnown RBP17.02■□□□□ 0.32
IRF1-210ENST00000493208 GTF2IP78347 998 aa17.02■□□□□ 0.32
IRF1-210ENST00000493208 ANGEL2Q5VTE6 544 aaKnown RBP17.02■□□□□ 0.32
IRF1-210ENST00000493208 DIEXFQ68CQ4 756 aaKnown RBP17.02■□□□□ 0.32
IRF1-210ENST00000493208 APOBEC3FQ8IUX4 373 aaKnown RBP17.02■□□□□ 0.32
IRF1-210ENST00000493208 TRMT2AQ8IZ69 625 aaKnown RBP17.02■□□□□ 0.32
IRF1-210ENST00000493208 TNS4Q8IZW8 715 aa17.02■□□□□ 0.32
IRF1-210ENST00000493208 SUCLG2Q96I99 432 aa17.02■□□□□ 0.32
IRF1-210ENST00000493208 GMLQ99445 158 aa17.02■□□□□ 0.32
IRF1-210ENST00000493208 PRDM10Q9NQV6 1147 aa17.02■□□□□ 0.32
IRF1-210ENST00000493208 SHTN1A0MZ66 631 aa17.01■□□□□ 0.31
IRF1-210ENST00000493208 FRAT2O75474 233 aaPredicted RBP17.01■□□□□ 0.31
IRF1-210ENST00000493208 RABL6Q3YEC7 729 aaPredicted RBP17.01■□□□□ 0.31
IRF1-210ENST00000493208 METTL24Q5JXM2 366 aa17.01■□□□□ 0.31
IRF1-210ENST00000493208 CYP4F22Q6NT55 531 aa17.01■□□□□ 0.31
IRF1-210ENST00000493208 REM2Q8IYK8 340 aaPredicted RBP17.01■□□□□ 0.31
IRF1-210ENST00000493208 BICC1Q9H694 974 aaKnown RBP17.01■□□□□ 0.31
IRF1-210ENST00000493208 WBP1LQ9NX94 342 aa17.01■□□□□ 0.31
IRF1-210ENST00000493208 SPEF2Q9C093 1822 aa17■□□□□ 0.31
IRF1-210ENST00000493208 IL1R1P14778 569 aa17■□□□□ 0.31
IRF1-210ENST00000493208 HIBADHP31937 336 aaKnown RBP17■□□□□ 0.31
IRF1-210ENST00000493208 DLGAP5Q15398 846 aa17■□□□□ 0.31
IRF1-210ENST00000493208 HELBQ8NG08 1087 aaPredicted RBP17■□□□□ 0.31
IRF1-210ENST00000493208 ARHGAP45Q92619 1136 aa17■□□□□ 0.31
IRF1-210ENST00000493208 CDCA7LQ96GN5 454 aa17■□□□□ 0.31
IRF1-210ENST00000493208 SASH1O94885 1247 aa16.99■□□□□ 0.31
IRF1-210ENST00000493208 EPHA10Q5JZY3 1008 aa16.99■□□□□ 0.31
IRF1-210ENST00000493208 RGMBQ6NW40 437 aa16.99■□□□□ 0.31
IRF1-210ENST00000493208 KIAA0825Q8IV33 1275 aa16.99■□□□□ 0.31
IRF1-210ENST00000493208 ZNF594Q96JF6 807 aaPredicted RBP16.99■□□□□ 0.31
IRF1-210ENST00000493208 FBXO3Q9UK99 471 aa16.99■□□□□ 0.31
IRF1-210ENST00000493208 ADM5C9JUS6 153 aa16.98■□□□□ 0.31
IRF1-210ENST00000493208 EGFRP00533 1210 aa16.98■□□□□ 0.31
IRF1-210ENST00000493208 IFIT1P09914 478 aaKnown RBP16.98■□□□□ 0.31
IRF1-210ENST00000493208 TXNRD3Q86VQ6 643 aa16.98■□□□□ 0.31
IRF1-210ENST00000493208 TBC1D22AQ8WUA7 517 aa16.98■□□□□ 0.31
IRF1-210ENST00000493208 CDCA5Q96FF9 252 aa16.98■□□□□ 0.31
IRF1-210ENST00000493208 NOB1Q9ULX3 412 aaKnown RBP16.98■□□□□ 0.31
IRF1-210ENST00000493208 PSME4Q14997 1843 aa16.98■□□□□ 0.31
IRF1-210ENST00000493208 FOXN1O15353 648 aa16.97■□□□□ 0.31
IRF1-210ENST00000493208 GNAI3P08754 354 aa16.97■□□□□ 0.31
IRF1-210ENST00000493208 ZNF157P51786 506 aaPredicted RBP16.97■□□□□ 0.31
IRF1-210ENST00000493208 FMR1Q06787 632 aaKnown RBP eCLIP16.97■□□□□ 0.31
IRF1-210ENST00000493208 TTLL12Q14166 644 aaPredicted RBP16.97■□□□□ 0.31
IRF1-210ENST00000493208 USP44Q9H0E7 712 aa16.97■□□□□ 0.31
IRF1-210ENST00000493208 PPP2R3BQ9Y5P8 575 aa16.97■□□□□ 0.31
IRF1-210ENST00000493208 WNT10BO00744 389 aa16.96■□□□□ 0.31
IRF1-210ENST00000493208 RBM5P52756 815 aaKnown RBP eCLIP16.96■□□□□ 0.31
IRF1-210ENST00000493208 TNFAIP1Q13829 316 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms