RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 RFX5P48382 616 aaPredicted RBP13.31□□□□□ -0.28
CDC42SE1-206ENST00000492796 UBE4AQ14139 1066 aa13.31□□□□□ -0.28
CDC42SE1-206ENST00000492796 EAPPQ56P03 285 aaPredicted RBP13.31□□□□□ -0.28
CDC42SE1-206ENST00000492796 HELBQ8NG08 1087 aaPredicted RBP13.31□□□□□ -0.28
CDC42SE1-206ENST00000492796 PUS3Q9BZE2 481 aaKnown RBP13.31□□□□□ -0.28
CDC42SE1-206ENST00000492796 ADARB2Q9NS39 739 aaKnown RBP13.31□□□□□ -0.28
CDC42SE1-206ENST00000492796 RCAN3Q9UKA8 241 aa13.31□□□□□ -0.28
CDC42SE1-206ENST00000492796 USP17L3A6NCW0 530 aa13.3□□□□□ -0.28
CDC42SE1-206ENST00000492796 USP17L4A6NCW7 530 aa13.3□□□□□ -0.28
CDC42SE1-206ENST00000492796 GNAI2P04899 355 aa13.3□□□□□ -0.28
CDC42SE1-206ENST00000492796 POTEIP0CG38 1075 aa13.3□□□□□ -0.28
CDC42SE1-206ENST00000492796 POTEJP0CG39 1038 aa13.3□□□□□ -0.28
CDC42SE1-206ENST00000492796 KLRK1P26718 216 aa13.3□□□□□ -0.28
CDC42SE1-206ENST00000492796 PTPN12Q05209 780 aaKnown RBP13.3□□□□□ -0.28
CDC42SE1-206ENST00000492796 MTX1Q13505 466 aa13.3□□□□□ -0.28
CDC42SE1-206ENST00000492796 LRRC24Q50LG9 513 aa13.3□□□□□ -0.28
CDC42SE1-206ENST00000492796 USP17L1Q7RTZ2 530 aa13.3□□□□□ -0.28
CDC42SE1-206ENST00000492796 ZNF804AQ7Z570 1209 aa13.3□□□□□ -0.28
CDC42SE1-206ENST00000492796 TXNRD3Q86VQ6 643 aa13.3□□□□□ -0.28
CDC42SE1-206ENST00000492796 AGBL3Q8NEM8 1001 aa13.3□□□□□ -0.28
CDC42SE1-206ENST00000492796 KCNQ5Q9NR82 932 aa13.3□□□□□ -0.28
CDC42SE1-206ENST00000492796 H7C1D1 291 aa13.29□□□□□ -0.28
CDC42SE1-206ENST00000492796 EYA2O00167 538 aa13.29□□□□□ -0.28
CDC42SE1-206ENST00000492796 PLIN1O60240 522 aa13.29□□□□□ -0.28
CDC42SE1-206ENST00000492796 CIAO1O76071 339 aa13.29□□□□□ -0.28
CDC42SE1-206ENST00000492796 METTL24Q5JXM2 366 aa13.29□□□□□ -0.28
CDC42SE1-206ENST00000492796 STRIP1Q5VSL9 837 aa13.29□□□□□ -0.28
CDC42SE1-206ENST00000492796 RSBN1LQ6PCB5 846 aaPredicted RBP13.29□□□□□ -0.28
CDC42SE1-206ENST00000492796 ITPRIPQ8IWB1 547 aa13.29□□□□□ -0.28
CDC42SE1-206ENST00000492796 VGLL2Q8N8G2 317 aa13.29□□□□□ -0.28
CDC42SE1-206ENST00000492796 KLHDC4Q8TBB5 520 aa13.29□□□□□ -0.28
CDC42SE1-206ENST00000492796 CNOT7Q9UIV1 285 aaKnown RBP13.29□□□□□ -0.28
CDC42SE1-206ENST00000492796 CLEC11AQ9Y240 323 aa13.29□□□□□ -0.28
CDC42SE1-206ENST00000492796 ZBTB12Q9Y330 459 aaPredicted RBP13.29□□□□□ -0.28
CDC42SE1-206ENST00000492796 MYO3BQ8WXR4 1341 aa13.29□□□□□ -0.28
CDC42SE1-206ENST00000492796 ARAP2Q8WZ64 1704 aa13.28□□□□□ -0.28
CDC42SE1-206ENST00000492796 SNAP23O00161 211 aa13.28□□□□□ -0.28
CDC42SE1-206ENST00000492796 PDE8BO95263 885 aa13.28□□□□□ -0.28
CDC42SE1-206ENST00000492796 RLBP1P12271 317 aa13.28□□□□□ -0.28
CDC42SE1-206ENST00000492796 APLP1P51693 650 aa13.28□□□□□ -0.28
CDC42SE1-206ENST00000492796 MICALL2Q8IY33 904 aa13.28□□□□□ -0.28
CDC42SE1-206ENST00000492796 CD209Q9NNX6 404 aa13.28□□□□□ -0.28
CDC42SE1-206ENST00000492796 COPRSQ9NQ92 184 aa13.28□□□□□ -0.28
CDC42SE1-206ENST00000492796 SRGAP3O43295 1099 aa13.27□□□□□ -0.29
CDC42SE1-206ENST00000492796 IL1R1P14778 569 aa13.27□□□□□ -0.29
CDC42SE1-206ENST00000492796 PUM3Q15397 648 aaKnown RBP13.27□□□□□ -0.29
CDC42SE1-206ENST00000492796 DACT2Q5SW24 774 aa13.27□□□□□ -0.29
CDC42SE1-206ENST00000492796 IL15P40933 162 aaPredicted RBP13.26□□□□□ -0.29
CDC42SE1-206ENST00000492796 MMP14P50281 582 aa13.26□□□□□ -0.29
CDC42SE1-206ENST00000492796 ATG9AQ7Z3C6 839 aa13.26□□□□□ -0.29
CDC42SE1-206ENST00000492796 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.26□□□□□ -0.29
CDC42SE1-206ENST00000492796 ZC3H15Q8WU90 426 aaKnown RBP13.26□□□□□ -0.29
CDC42SE1-206ENST00000492796 GMLQ99445 158 aa13.26□□□□□ -0.29
CDC42SE1-206ENST00000492796 PASKQ96RG2 1323 aa13.25□□□□□ -0.29
CDC42SE1-206ENST00000492796 ZBTB7BO15156 539 aaPredicted RBP13.25□□□□□ -0.29
CDC42SE1-206ENST00000492796 IFIT1P09914 478 aaKnown RBP13.25□□□□□ -0.29
CDC42SE1-206ENST00000492796 ZNF280AP59817 542 aaPredicted RBP13.25□□□□□ -0.29
CDC42SE1-206ENST00000492796 TTLL5Q6EMB2 1281 aa13.25□□□□□ -0.29
CDC42SE1-206ENST00000492796 TRPM4Q8TD43 1214 aa13.25□□□□□ -0.29
CDC42SE1-206ENST00000492796 PANK1Q8TE04 598 aa13.25□□□□□ -0.29
CDC42SE1-206ENST00000492796 FBXW7Q969H0 707 aa13.25□□□□□ -0.29
CDC42SE1-206ENST00000492796 SIL1Q9H173 461 aa13.25□□□□□ -0.29
CDC42SE1-206ENST00000492796 PGAP2Q9UHJ9 254 aa13.25□□□□□ -0.29
CDC42SE1-206ENST00000492796 MYH13Q9UKX3 1938 aa13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 SHTN1A0MZ66 631 aa13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 ITGBL1O95965 494 aaPredicted RBP13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 USP17L8P0C7I0 530 aa13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 FGFR2P21802 821 aa13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 HIBADHP31937 336 aaKnown RBP13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 HIRAP54198 1017 aaPredicted RBP13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 FKBP1AP62942 108 aaKnown RBP13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 GTF2IP78347 998 aa13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 MVPQ14764 893 aaKnown RBP13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 CAVIN4Q5BKX8 364 aa13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 MAP1SQ66K74 1059 aaPredicted RBP13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 VPS37DQ86XT2 251 aa13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 CNTROBQ8N137 903 aa13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 LPIN2Q92539 896 aa13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 FAM84BQ96KN1 310 aaPredicted RBP13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 YTHDC1Q96MU7 727 aaKnown RBP13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 CHMP4BQ9H444 224 aaKnown RBP13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 CEP126Q9P2H0 1117 aa13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 DDX19BQ9UMR2 479 aa13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 PA2G4Q9UQ80 394 aaKnown RBP13.24□□□□□ -0.29
CDC42SE1-206ENST00000492796 FAM205AQ6ZU69 1335 aa13.23□□□□□ -0.29
CDC42SE1-206ENST00000492796 PNMA6EA0A0J9YXQ4 647 aa13.23□□□□□ -0.29
CDC42SE1-206ENST00000492796 SASH1O94885 1247 aa13.23□□□□□ -0.29
CDC42SE1-206ENST00000492796 SLC5A1P13866 664 aa13.23□□□□□ -0.29
CDC42SE1-206ENST00000492796 GYG1P46976 350 aa13.23□□□□□ -0.29
CDC42SE1-206ENST00000492796 KIF4BQ2VIQ3 1234 aa13.23□□□□□ -0.29
CDC42SE1-206ENST00000492796 TBC1D10BQ4KMP7 808 aaPredicted RBP13.23□□□□□ -0.29
CDC42SE1-206ENST00000492796 SAMD7Q7Z3H4 446 aa13.23□□□□□ -0.29
CDC42SE1-206ENST00000492796 FBXO33Q7Z6M2 555 aa13.23□□□□□ -0.29
CDC42SE1-206ENST00000492796 OGFOD1Q8N543 542 aa13.23□□□□□ -0.29
CDC42SE1-206ENST00000492796 TDRD7Q8NHU6 1098 aaKnown RBP13.23□□□□□ -0.29
CDC42SE1-206ENST00000492796 TRPM7Q96QT4 1865 aa13.23□□□□□ -0.29
CDC42SE1-206ENST00000492796 ATP8B2P98198 1209 aa13.22□□□□□ -0.29
CDC42SE1-206ENST00000492796 POLA2Q14181 598 aa13.22□□□□□ -0.29
CDC42SE1-206ENST00000492796 PDE3AQ14432 1141 aa13.22□□□□□ -0.29
CDC42SE1-206ENST00000492796 ATP2B3Q16720 1220 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms