RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 ALDH1L2Q3SY69 923 aa14.91□□□□□ -0.02
MDC1-207ENST00000492462 DPF2Q92785 391 aa14.91□□□□□ -0.02
MDC1-207ENST00000492462 UTYO14607 1347 aa14.91□□□□□ -0.02
MDC1-207ENST00000492462 TMEM88BA6NKF7 163 aa14.9□□□□□ -0.02
MDC1-207ENST00000492462 H7C1D1 291 aa14.9□□□□□ -0.02
MDC1-207ENST00000492462 TBC1D10BQ4KMP7 808 aaPredicted RBP14.9□□□□□ -0.02
MDC1-207ENST00000492462 DLK2Q6UY11 383 aa14.9□□□□□ -0.02
MDC1-207ENST00000492462 MXD3Q9BW11 206 aa14.9□□□□□ -0.02
MDC1-207ENST00000492462 GLIS2Q9BZE0 524 aaPredicted RBP14.9□□□□□ -0.02
MDC1-207ENST00000492462 PGAP2Q9UHJ9 254 aa14.9□□□□□ -0.02
MDC1-207ENST00000492462 LEMD3Q9Y2U8 911 aa14.9□□□□□ -0.02
MDC1-207ENST00000492462 TRPM7Q96QT4 1865 aa14.9□□□□□ -0.02
MDC1-207ENST00000492462 ZNF804BA4D1E1 1349 aa14.9□□□□□ -0.02
MDC1-207ENST00000492462 RBM26Q5T8P6 1007 aaKnown RBP14.89□□□□□ -0.03
MDC1-207ENST00000492462 ANKRD44Q8N8A2 993 aa14.89□□□□□ -0.03
MDC1-207ENST00000492462 ANKRD2Q9GZV1 360 aa14.89□□□□□ -0.03
MDC1-207ENST00000492462 BICC1Q9H694 974 aaKnown RBP14.89□□□□□ -0.03
MDC1-207ENST00000492462 RPS12P25398 132 aaKnown RBP14.88□□□□□ -0.03
MDC1-207ENST00000492462 VEGFBP49765 207 aa14.88□□□□□ -0.03
MDC1-207ENST00000492462 CCDC57Q2TAC2 916 aa14.88□□□□□ -0.03
MDC1-207ENST00000492462 RSBN1LQ6PCB5 846 aaPredicted RBP14.88□□□□□ -0.03
MDC1-207ENST00000492462 PODNQ7Z5L7 613 aa14.88□□□□□ -0.03
MDC1-207ENST00000492462 GMLQ99445 158 aa14.88□□□□□ -0.03
MDC1-207ENST00000492462 PUS3Q9BZE2 481 aaKnown RBP14.88□□□□□ -0.03
MDC1-207ENST00000492462 USP44Q9H0E7 712 aa14.88□□□□□ -0.03
MDC1-207ENST00000492462 NOB1Q9ULX3 412 aaKnown RBP14.88□□□□□ -0.03
MDC1-207ENST00000492462 ASTN2O75129 1339 aaPredicted RBP14.88□□□□□ -0.03
MDC1-207ENST00000492462 IRS2Q9Y4H2 1338 aa14.88□□□□□ -0.03
MDC1-207ENST00000492462 USP17L3A6NCW0 530 aa14.87□□□□□ -0.03
MDC1-207ENST00000492462 USP17L4A6NCW7 530 aa14.87□□□□□ -0.03
MDC1-207ENST00000492462 CT47B1P0C2W7 299 aaPredicted RBP14.87□□□□□ -0.03
MDC1-207ENST00000492462 RARSP54136 660 aaKnown RBP14.87□□□□□ -0.03
MDC1-207ENST00000492462 CST9Q5W186 159 aa14.87□□□□□ -0.03
MDC1-207ENST00000492462 USP17L1Q7RTZ2 530 aa14.87□□□□□ -0.03
MDC1-207ENST00000492462 PLIN1O60240 522 aa14.86□□□□□ -0.03
MDC1-207ENST00000492462 KCNJ4P48050 445 aa14.86□□□□□ -0.03
MDC1-207ENST00000492462 HNRNPUQ00839 825 aaKnown RBP eCLIP14.86□□□□□ -0.03
MDC1-207ENST00000492462 RABL6Q3YEC7 729 aaPredicted RBP14.86□□□□□ -0.03
MDC1-207ENST00000492462 TAF7LQ5H9L4 462 aa14.86□□□□□ -0.03
MDC1-207ENST00000492462 DACT2Q5SW24 774 aa14.86□□□□□ -0.03
MDC1-207ENST00000492462 LDHAL6AQ6ZMR3 332 aa14.86□□□□□ -0.03
MDC1-207ENST00000492462 ZC3H15Q8WU90 426 aaKnown RBP14.86□□□□□ -0.03
MDC1-207ENST00000492462 COA1Q9GZY4 146 aa14.86□□□□□ -0.03
MDC1-207ENST00000492462 CNNM1Q9NRU3 951 aa14.86□□□□□ -0.03
MDC1-207ENST00000492462 ZNF609O15014 1411 aa14.85□□□□□ -0.03
MDC1-207ENST00000492462 ZNF280AP59817 542 aaPredicted RBP14.85□□□□□ -0.03
MDC1-207ENST00000492462 KIF4BQ2VIQ3 1234 aa14.85□□□□□ -0.03
MDC1-207ENST00000492462 USP48Q86UV5 1035 aa14.85□□□□□ -0.03
MDC1-207ENST00000492462 AGBL3Q8NEM8 1001 aa14.85□□□□□ -0.03
MDC1-207ENST00000492462 FBXW7Q969H0 707 aa14.85□□□□□ -0.03
MDC1-207ENST00000492462 USP17L8P0C7I0 530 aa14.84□□□□□ -0.03
MDC1-207ENST00000492462 BRPF1P55201 1214 aaPredicted RBP14.84□□□□□ -0.03
MDC1-207ENST00000492462 KLHDC4Q8TBB5 520 aa14.84□□□□□ -0.03
MDC1-207ENST00000492462 CD209Q9NNX6 404 aa14.84□□□□□ -0.03
MDC1-207ENST00000492462 ABT1Q9ULW3 272 aaKnown RBP14.84□□□□□ -0.03
MDC1-207ENST00000492462 TNNQ9UQP3 1299 aa14.84□□□□□ -0.03
MDC1-207ENST00000492462 RASSF10A6NK89 507 aa14.83□□□□□ -0.04
MDC1-207ENST00000492462 ADM5C9JUS6 153 aa14.83□□□□□ -0.04
MDC1-207ENST00000492462 CELF2O95319 508 aaKnown RBP14.83□□□□□ -0.04
MDC1-207ENST00000492462 GTF2IP78347 998 aa14.83□□□□□ -0.04
MDC1-207ENST00000492462 LRRC24Q50LG9 513 aa14.83□□□□□ -0.04
MDC1-207ENST00000492462 C15orf52Q6ZUT6 534 aaKnown RBP14.83□□□□□ -0.04
MDC1-207ENST00000492462 CDC37L1Q7L3B6 337 aa14.83□□□□□ -0.04
MDC1-207ENST00000492462 ZNF408Q9H9D4 720 aa14.83□□□□□ -0.04
MDC1-207ENST00000492462 RIPOR2Q9Y4F9 1068 aa14.83□□□□□ -0.04
MDC1-207ENST00000492462 BCAR3O75815 825 aa14.82□□□□□ -0.04
MDC1-207ENST00000492462 SCARF1Q14162 830 aa14.82□□□□□ -0.04
MDC1-207ENST00000492462 DEFB115Q30KQ5 88 aa14.82□□□□□ -0.04
MDC1-207ENST00000492462 STRIP1Q5VSL9 837 aa14.82□□□□□ -0.04
MDC1-207ENST00000492462 TTLL5Q6EMB2 1281 aa14.82□□□□□ -0.04
MDC1-207ENST00000492462 KRT26Q7Z3Y9 468 aa14.82□□□□□ -0.04
MDC1-207ENST00000492462 API5Q9BZZ5 524 aaKnown RBP14.82□□□□□ -0.04
MDC1-207ENST00000492462 MYOZ2Q9NPC6 264 aa14.82□□□□□ -0.04
MDC1-207ENST00000492462 GGA3Q9NZ52 723 aa14.82□□□□□ -0.04
MDC1-207ENST00000492462 RFX5P48382 616 aaPredicted RBP14.81□□□□□ -0.04
MDC1-207ENST00000492462 CERS5Q8N5B7 392 aa14.81□□□□□ -0.04
MDC1-207ENST00000492462 SCAF8Q9UPN6 1271 aaKnown RBP14.81□□□□□ -0.04
MDC1-207ENST00000492462 JAG2Q9Y219 1238 aa14.81□□□□□ -0.04
MDC1-207ENST00000492462 TLL2Q9Y6L7 1015 aa14.81□□□□□ -0.04
MDC1-207ENST00000492462 GYG1P46976 350 aa14.8□□□□□ -0.04
MDC1-207ENST00000492462 NBPF9Q3BBW0 867 aa14.8□□□□□ -0.04
MDC1-207ENST00000492462 ANGEL2Q5VTE6 544 aaKnown RBP14.8□□□□□ -0.04
MDC1-207ENST00000492462 PRPF38BQ5VTL8 546 aaKnown RBP14.8□□□□□ -0.04
MDC1-207ENST00000492462 KIAA0825Q8IV33 1275 aa14.8□□□□□ -0.04
MDC1-207ENST00000492462 DCPSQ96C86 337 aaKnown RBP14.8□□□□□ -0.04
MDC1-207ENST00000492462 UBTFL1P0CB47 393 aaPredicted RBP14.79□□□□□ -0.04
MDC1-207ENST00000492462 IL1R1P14778 569 aa14.79□□□□□ -0.04
MDC1-207ENST00000492462 MAP2K1Q02750 393 aaPredicted RBP14.79□□□□□ -0.04
MDC1-207ENST00000492462 GRM1Q13255 1194 aa14.79□□□□□ -0.04
MDC1-207ENST00000492462 CYP4F22Q6NT55 531 aa14.79□□□□□ -0.04
MDC1-207ENST00000492462 PAXIP1Q6ZW49 1069 aaPredicted RBP14.79□□□□□ -0.04
MDC1-207ENST00000492462 ZNF804AQ7Z570 1209 aa14.79□□□□□ -0.04
MDC1-207ENST00000492462 SAPCD2Q86UD0 394 aa14.79□□□□□ -0.04
MDC1-207ENST00000492462 KIF16BQ96L93 1317 aa14.79□□□□□ -0.04
MDC1-207ENST00000492462 MEIS3Q99687 375 aa14.79□□□□□ -0.04
MDC1-207ENST00000492462 WDR33Q9C0J8 1336 aaKnown RBP14.79□□□□□ -0.04
MDC1-207ENST00000492462 LRRFIP2Q9Y608 721 aaKnown RBP14.79□□□□□ -0.04
MDC1-207ENST00000492462 MROH5Q6ZUA9 1318 aa14.78□□□□□ -0.04
MDC1-207ENST00000492462 MYO3BQ8WXR4 1341 aa14.78□□□□□ -0.04
MDC1-207ENST00000492462 SASH1O94885 1247 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms