RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 TSHZ3Q63HK5 1081 aa11.18□□□□□ -0.62
VPS8-225ENST00000492449 AFAP1L1Q8TED9 768 aa11.18□□□□□ -0.62
VPS8-225ENST00000492449 FAM169AQ9Y6X4 670 aa11.18□□□□□ -0.62
VPS8-225ENST00000492449 H0YHG0 523 aa11.18□□□□□ -0.62
VPS8-225ENST00000492449 CHUKO15111 745 aa11.18□□□□□ -0.62
VPS8-225ENST00000492449 PRKAR2BP31323 418 aa11.18□□□□□ -0.62
VPS8-225ENST00000492449 LIG3P49916 1009 aa11.18□□□□□ -0.62
VPS8-225ENST00000492449 SARNPP82979 210 aaKnown RBP11.18□□□□□ -0.62
VPS8-225ENST00000492449 CASP8Q14790 479 aa11.18□□□□□ -0.62
VPS8-225ENST00000492449 FBXW10Q5XX13 1052 aa11.18□□□□□ -0.62
VPS8-225ENST00000492449 FAM173BQ6P4H8 233 aa11.18□□□□□ -0.62
VPS8-225ENST00000492449 TICAM2Q86XR7 235 aa11.18□□□□□ -0.62
VPS8-225ENST00000492449 NUTM1Q86Y26 1132 aa11.18□□□□□ -0.62
VPS8-225ENST00000492449 CTCFLQ8NI51 663 aaPredicted RBP11.18□□□□□ -0.62
VPS8-225ENST00000492449 A0A1W2PP64 1363 aa11.18□□□□□ -0.62
VPS8-225ENST00000492449 ARHGAP6O43182 974 aa11.17□□□□□ -0.62
VPS8-225ENST00000492449 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.17□□□□□ -0.62
VPS8-225ENST00000492449 CEP112Q8N8E3 955 aa11.17□□□□□ -0.62
VPS8-225ENST00000492449 ENGASEQ8NFI3 743 aa11.17□□□□□ -0.62
VPS8-225ENST00000492449 ITFG2Q969R8 447 aa11.17□□□□□ -0.62
VPS8-225ENST00000492449 LARP6Q9BRS8 491 aaKnown RBP11.17□□□□□ -0.62
VPS8-225ENST00000492449 IFNKQ9P0W0 207 aa11.17□□□□□ -0.62
VPS8-225ENST00000492449 CFAP45Q9UL16 551 aa11.17□□□□□ -0.62
VPS8-225ENST00000492449 PPP2R2CQ9Y2T4 447 aa11.17□□□□□ -0.62
VPS8-225ENST00000492449 CYP46A1Q9Y6A2 500 aa11.17□□□□□ -0.62
VPS8-225ENST00000492449 CUTAO60888 179 aa11.17□□□□□ -0.62
VPS8-225ENST00000492449 FSBPO95073 299 aa11.17□□□□□ -0.62
VPS8-225ENST00000492449 FNTAP49354 379 aa11.17□□□□□ -0.62
VPS8-225ENST00000492449 CHMP4BP1P59074 171 aa11.17□□□□□ -0.62
VPS8-225ENST00000492449 GRIK3Q13003 919 aa11.17□□□□□ -0.62
VPS8-225ENST00000492449 RESTQ13127 1097 aa11.17□□□□□ -0.62
VPS8-225ENST00000492449 FERMT3Q86UX7 667 aa11.17□□□□□ -0.62
VPS8-225ENST00000492449 TMEM139Q8IV31 216 aa11.17□□□□□ -0.62
VPS8-225ENST00000492449 WDR24Q96S15 920 aa11.17□□□□□ -0.62
VPS8-225ENST00000492449 JPH2Q9BR39 696 aaPredicted RBP11.17□□□□□ -0.62
VPS8-225ENST00000492449 DNAJC5Q9H3Z4 198 aa11.17□□□□□ -0.62
VPS8-225ENST00000492449 TFIP11Q9UBB9 837 aaKnown RBP11.17□□□□□ -0.62
VPS8-225ENST00000492449 CAMSAP1Q5T5Y3 1602 aa11.17□□□□□ -0.62
VPS8-225ENST00000492449 ZKSCAN4Q969J2 545 aaPredicted RBP11.16□□□□□ -0.62
VPS8-225ENST00000492449 ABCB6Q9NP58 842 aa11.16□□□□□ -0.62
VPS8-225ENST00000492449 ELL2O00472 640 aaPredicted RBP11.16□□□□□ -0.62
VPS8-225ENST00000492449 EBAG9O00559 213 aa11.16□□□□□ -0.62
VPS8-225ENST00000492449 RTN2O75298 545 aa11.16□□□□□ -0.62
VPS8-225ENST00000492449 CYB5RLQ6IPT4 315 aa11.16□□□□□ -0.62
VPS8-225ENST00000492449 FAM43BQ6ZT52 329 aaPredicted RBP11.16□□□□□ -0.62
VPS8-225ENST00000492449 CLIC6Q96NY7 704 aa11.16□□□□□ -0.62
VPS8-225ENST00000492449 XRN1Q8IZH2 1706 aaKnown RBP11.16□□□□□ -0.62
VPS8-225ENST00000492449 INPP5BP32019 993 aa11.16□□□□□ -0.62
VPS8-225ENST00000492449 ICA1Q05084 483 aa11.16□□□□□ -0.62
VPS8-225ENST00000492449 SF3B2Q13435 895 aaKnown RBP11.16□□□□□ -0.62
VPS8-225ENST00000492449 TATDN2Q93075 761 aa11.16□□□□□ -0.62
VPS8-225ENST00000492449 DHX58Q96C10 678 aa11.16□□□□□ -0.62
VPS8-225ENST00000492449 PNKPQ96T60 521 aa11.16□□□□□ -0.62
VPS8-225ENST00000492449 TPCN1Q9ULQ1 816 aa11.16□□□□□ -0.62
VPS8-225ENST00000492449 RPGRIP1LQ68CZ1 1315 aa11.16□□□□□ -0.62
VPS8-225ENST00000492449 RNF40O75150 1001 aa11.15□□□□□ -0.62
VPS8-225ENST00000492449 SYF2O95926 243 aaKnown RBP11.15□□□□□ -0.62
VPS8-225ENST00000492449 FAM160A1Q05DH4 1040 aa11.15□□□□□ -0.62
VPS8-225ENST00000492449 NBPF5PQ86XG9 351 aaPredicted RBP11.15□□□□□ -0.62
VPS8-225ENST00000492449 ERCC4Q92889 916 aaPredicted RBP11.15□□□□□ -0.62
VPS8-225ENST00000492449 FAM210AQ96ND0 272 aa11.15□□□□□ -0.62
VPS8-225ENST00000492449 RCOR1Q9UKL0 485 aa11.15□□□□□ -0.62
VPS8-225ENST00000492449 CDHR2Q9BYE9 1310 aa11.15□□□□□ -0.62
VPS8-225ENST00000492449 ARHGEF10O15013 1369 aa11.15□□□□□ -0.62
VPS8-225ENST00000492449 MAP2P11137 1827 aaKnown RBP11.15□□□□□ -0.62
VPS8-225ENST00000492449 NF2P35240 595 aa11.15□□□□□ -0.62
VPS8-225ENST00000492449 GNG11P61952 73 aa11.15□□□□□ -0.62
VPS8-225ENST00000492449 ISM2Q6H9L7 571 aa11.15□□□□□ -0.62
VPS8-225ENST00000492449 WDR93Q6P2C0 686 aa11.15□□□□□ -0.62
VPS8-225ENST00000492449 SPATS2Q86XZ4 545 aaKnown RBP11.15□□□□□ -0.62
VPS8-225ENST00000492449 N4BP2L2Q92802 583 aaPredicted RBP11.15□□□□□ -0.62
VPS8-225ENST00000492449 THUMPD2Q9BTF0 503 aaKnown RBP11.15□□□□□ -0.62
VPS8-225ENST00000492449 PLEKHA4Q9H4M7 779 aa11.15□□□□□ -0.62
VPS8-225ENST00000492449 ABCC1P33527 1531 aa11.14□□□□□ -0.63
VPS8-225ENST00000492449 IKBKBO14920 756 aa11.14□□□□□ -0.63
VPS8-225ENST00000492449 MYO1BO43795 1136 aa11.14□□□□□ -0.63
VPS8-225ENST00000492449 CCT4P50991 539 aaKnown RBP11.14□□□□□ -0.63
VPS8-225ENST00000492449 ATL3Q6DD88 541 aa11.14□□□□□ -0.63
VPS8-225ENST00000492449 CCAR1Q8IX12 1150 aaKnown RBP11.14□□□□□ -0.63
VPS8-225ENST00000492449 CCDC102AQ96A19 550 aa11.14□□□□□ -0.63
VPS8-225ENST00000492449 TRIM6Q9C030 488 aaPredicted RBP11.14□□□□□ -0.63
VPS8-225ENST00000492449 GOLPH3LQ9H4A5 285 aa11.14□□□□□ -0.63
VPS8-225ENST00000492449 C14orf93Q9H972 538 aaKnown RBP11.14□□□□□ -0.63
VPS8-225ENST00000492449 TTC36A6NLP5 189 aa11.14□□□□□ -0.63
VPS8-225ENST00000492449 GNAI2P04899 355 aa11.14□□□□□ -0.63
VPS8-225ENST00000492449 CPA1P15085 419 aa11.14□□□□□ -0.63
VPS8-225ENST00000492449 ADCY2Q08462 1091 aa11.14□□□□□ -0.63
VPS8-225ENST00000492449 TBC1D8BQ0IIM8 1120 aa11.14□□□□□ -0.63
VPS8-225ENST00000492449 ANKRD1Q15327 319 aa11.14□□□□□ -0.63
VPS8-225ENST00000492449 NAIF1Q69YI7 327 aaPredicted RBP11.14□□□□□ -0.63
VPS8-225ENST00000492449 LARP1Q6PKG0 1096 aaKnown RBP11.14□□□□□ -0.63
VPS8-225ENST00000492449 PHACTR3Q96KR7 559 aa11.14□□□□□ -0.63
VPS8-225ENST00000492449 JAKMIP1Q96N16 626 aaKnown RBP11.14□□□□□ -0.63
VPS8-225ENST00000492449 NBPF3Q9H094 633 aa11.14□□□□□ -0.63
VPS8-225ENST00000492449 CBFA2T2O43439 604 aa11.13□□□□□ -0.63
VPS8-225ENST00000492449 KINO60870 393 aaKnown RBP11.13□□□□□ -0.63
VPS8-225ENST00000492449 NEBLO76041 1014 aa11.13□□□□□ -0.63
VPS8-225ENST00000492449 RDXP35241 583 aaKnown RBP11.13□□□□□ -0.63
VPS8-225ENST00000492449 NCAPHQ15003 741 aa11.13□□□□□ -0.63
VPS8-225ENST00000492449 NECAB1Q8N987 351 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms