RNA–Protein interactions for RNA: ENST00000492331.1

MCF2L2-213, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 661 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-213ENST00000492331 COA1Q9GZY4 146 aa12.24□□□□□ -0.45
MCF2L2-213ENST00000492331 ZNF408Q9H9D4 720 aa12.24□□□□□ -0.45
MCF2L2-213ENST00000492331 NOB1Q9ULX3 412 aaKnown RBP12.24□□□□□ -0.45
MCF2L2-213ENST00000492331 SNAP23O00161 211 aa12.23□□□□□ -0.45
MCF2L2-213ENST00000492331 EGFRP00533 1210 aa12.23□□□□□ -0.45
MCF2L2-213ENST00000492331 KLRK1P26718 216 aa12.23□□□□□ -0.45
MCF2L2-213ENST00000492331 KIF4BQ2VIQ3 1234 aa12.23□□□□□ -0.45
MCF2L2-213ENST00000492331 DEFB115Q30KQ5 88 aa12.23□□□□□ -0.45
MCF2L2-213ENST00000492331 CDC37L1Q7L3B6 337 aa12.23□□□□□ -0.45
MCF2L2-213ENST00000492331 AGBL3Q8NEM8 1001 aa12.23□□□□□ -0.45
MCF2L2-213ENST00000492331 DCPSQ96C86 337 aaKnown RBP12.23□□□□□ -0.45
MCF2L2-213ENST00000492331 BICC1Q9H694 974 aaKnown RBP12.23□□□□□ -0.45
MCF2L2-213ENST00000492331 PGAP2Q9UHJ9 254 aa12.23□□□□□ -0.45
MCF2L2-213ENST00000492331 CNTNAP1P78357 1384 aa12.22□□□□□ -0.45
MCF2L2-213ENST00000492331 UTYO14607 1347 aa12.22□□□□□ -0.45
MCF2L2-213ENST00000492331 CELF2O95319 508 aaKnown RBP12.22□□□□□ -0.45
MCF2L2-213ENST00000492331 USP17L8P0C7I0 530 aa12.22□□□□□ -0.45
MCF2L2-213ENST00000492331 VEGFBP49765 207 aa12.22□□□□□ -0.45
MCF2L2-213ENST00000492331 GRM1Q13255 1194 aa12.22□□□□□ -0.45
MCF2L2-213ENST00000492331 TTLL5Q6EMB2 1281 aa12.22□□□□□ -0.45
MCF2L2-213ENST00000492331 KAZALD1Q96I82 304 aa12.22□□□□□ -0.45
MCF2L2-213ENST00000492331 MXD3Q9BW11 206 aa12.22□□□□□ -0.45
MCF2L2-213ENST00000492331 GTF2IP78347 998 aa12.21□□□□□ -0.45
MCF2L2-213ENST00000492331 CST9Q5W186 159 aa12.21□□□□□ -0.45
MCF2L2-213ENST00000492331 KRT26Q7Z3Y9 468 aa12.21□□□□□ -0.45
MCF2L2-213ENST00000492331 OGFOD1Q8N543 542 aa12.21□□□□□ -0.45
MCF2L2-213ENST00000492331 PUS3Q9BZE2 481 aaKnown RBP12.21□□□□□ -0.45
MCF2L2-213ENST00000492331 API5Q9BZZ5 524 aaKnown RBP12.21□□□□□ -0.45
MCF2L2-213ENST00000492331 USP44Q9H0E7 712 aa12.21□□□□□ -0.45
MCF2L2-213ENST00000492331 TRPM7Q96QT4 1865 aa12.21□□□□□ -0.46
MCF2L2-213ENST00000492331 HSPA1AP0DMV8 641 aaKnown RBP12.2□□□□□ -0.46
MCF2L2-213ENST00000492331 HSPA1BP0DMV9 641 aaKnown RBP12.2□□□□□ -0.46
MCF2L2-213ENST00000492331 RARSP54136 660 aaKnown RBP12.2□□□□□ -0.46
MCF2L2-213ENST00000492331 SCARF1Q14162 830 aa12.2□□□□□ -0.46
MCF2L2-213ENST00000492331 DACT2Q5SW24 774 aa12.2□□□□□ -0.46
MCF2L2-213ENST00000492331 STRIP1Q5VSL9 837 aa12.2□□□□□ -0.46
MCF2L2-213ENST00000492331 DLK2Q6UY11 383 aa12.2□□□□□ -0.46
MCF2L2-213ENST00000492331 ZNF804AQ7Z570 1209 aa12.2□□□□□ -0.46
MCF2L2-213ENST00000492331 GMLQ99445 158 aa12.2□□□□□ -0.46
MCF2L2-213ENST00000492331 CD209Q9NNX6 404 aa12.2□□□□□ -0.46
MCF2L2-213ENST00000492331 MYOZ2Q9NPC6 264 aa12.2□□□□□ -0.46
MCF2L2-213ENST00000492331 MYO3BQ8WXR4 1341 aa12.19□□□□□ -0.46
MCF2L2-213ENST00000492331 PSME4Q14997 1843 aa12.19□□□□□ -0.46
MCF2L2-213ENST00000492331 RASSF10A6NK89 507 aa12.19□□□□□ -0.46
MCF2L2-213ENST00000492331 ADM5C9JUS6 153 aa12.19□□□□□ -0.46
MCF2L2-213ENST00000492331 UBTFL1P0CB47 393 aaPredicted RBP12.19□□□□□ -0.46
MCF2L2-213ENST00000492331 ZNF280AP59817 542 aaPredicted RBP12.19□□□□□ -0.46
MCF2L2-213ENST00000492331 SULF1Q8IWU6 871 aa12.19□□□□□ -0.46
MCF2L2-213ENST00000492331 ANKRD44Q8N8A2 993 aa12.19□□□□□ -0.46
MCF2L2-213ENST00000492331 FRAT1Q92837 279 aaPredicted RBP12.19□□□□□ -0.46
MCF2L2-213ENST00000492331 GGA3Q9NZ52 723 aa12.19□□□□□ -0.46
MCF2L2-213ENST00000492331 ASTN2O75129 1339 aaPredicted RBP12.18□□□□□ -0.46
MCF2L2-213ENST00000492331 KIF16BQ96L93 1317 aa12.18□□□□□ -0.46
MCF2L2-213ENST00000492331 WDR33Q9C0J8 1336 aaKnown RBP12.18□□□□□ -0.46
MCF2L2-213ENST00000492331 POLR2AP24928 1970 aaKnown RBP12.18□□□□□ -0.46
MCF2L2-213ENST00000492331 RABL6Q3YEC7 729 aaPredicted RBP12.18□□□□□ -0.46
MCF2L2-213ENST00000492331 LRRC24Q50LG9 513 aa12.18□□□□□ -0.46
MCF2L2-213ENST00000492331 METTL24Q5JXM2 366 aa12.18□□□□□ -0.46
MCF2L2-213ENST00000492331 ANGEL2Q5VTE6 544 aaKnown RBP12.18□□□□□ -0.46
MCF2L2-213ENST00000492331 CYP4F22Q6NT55 531 aa12.18□□□□□ -0.46
MCF2L2-213ENST00000492331 KIAA0825Q8IV33 1275 aa12.18□□□□□ -0.46
MCF2L2-213ENST00000492331 KLHDC4Q8TBB5 520 aa12.18□□□□□ -0.46
MCF2L2-213ENST00000492331 HDAC9Q9UKV0 1011 aa12.18□□□□□ -0.46
MCF2L2-213ENST00000492331 TLL2Q9Y6L7 1015 aa12.18□□□□□ -0.46
MCF2L2-213ENST00000492331 MROH5Q6ZUA9 1318 aa12.17□□□□□ -0.46
MCF2L2-213ENST00000492331 F8W031 263 aaPredicted RBP12.17□□□□□ -0.46
MCF2L2-213ENST00000492331 IPO8O15397 1037 aaKnown RBP12.17□□□□□ -0.46
MCF2L2-213ENST00000492331 ECE1P42892 770 aa12.17□□□□□ -0.46
MCF2L2-213ENST00000492331 BRPF1P55201 1214 aaPredicted RBP12.17□□□□□ -0.46
MCF2L2-213ENST00000492331 UBE4AQ14139 1066 aa12.17□□□□□ -0.46
MCF2L2-213ENST00000492331 C15orf52Q6ZUT6 534 aaKnown RBP12.17□□□□□ -0.46
MCF2L2-213ENST00000492331 AIDAQ96BJ3 306 aa12.17□□□□□ -0.46
MCF2L2-213ENST00000492331 CAPNS2Q96L46 248 aa12.17□□□□□ -0.46
MCF2L2-213ENST00000492331 JAG2Q9Y219 1238 aa12.17□□□□□ -0.46
MCF2L2-213ENST00000492331 RIPOR2Q9Y4F9 1068 aa12.17□□□□□ -0.46
MCF2L2-213ENST00000492331 A0A1B0GUL6 1792 aa12.17□□□□□ -0.46
MCF2L2-213ENST00000492331 BCAR3O75815 825 aa12.16□□□□□ -0.46
MCF2L2-213ENST00000492331 IL1R1P14778 569 aa12.16□□□□□ -0.46
MCF2L2-213ENST00000492331 HIBADHP31937 336 aaKnown RBP12.16□□□□□ -0.46
MCF2L2-213ENST00000492331 GYG1P46976 350 aa12.16□□□□□ -0.46
MCF2L2-213ENST00000492331 NBPF9Q3BBW0 867 aa12.16□□□□□ -0.46
MCF2L2-213ENST00000492331 SAPCD2Q86UD0 394 aa12.16□□□□□ -0.46
MCF2L2-213ENST00000492331 VPS37DQ86XT2 251 aa12.16□□□□□ -0.46
MCF2L2-213ENST00000492331 C2orf69Q8N8R5 385 aa12.16□□□□□ -0.46
MCF2L2-213ENST00000492331 ARHGAP45Q92619 1136 aa12.16□□□□□ -0.46
MCF2L2-213ENST00000492331 SCAF8Q9UPN6 1271 aaKnown RBP12.16□□□□□ -0.46
MCF2L2-213ENST00000492331 HDAC5Q9UQL6 1122 aa12.16□□□□□ -0.46
MCF2L2-213ENST00000492331 ZNF609O15014 1411 aa12.16□□□□□ -0.46
MCF2L2-213ENST00000492331 IRS2Q9Y4H2 1338 aa12.15□□□□□ -0.46
MCF2L2-213ENST00000492331 FRAT2O75474 233 aaPredicted RBP12.15□□□□□ -0.46
MCF2L2-213ENST00000492331 SASH1O94885 1247 aa12.15□□□□□ -0.46
MCF2L2-213ENST00000492331 HUNKP57058 714 aa12.15□□□□□ -0.46
MCF2L2-213ENST00000492331 CLUAP1Q96AJ1 413 aa12.15□□□□□ -0.46
MCF2L2-213ENST00000492331 CDCA5Q96FF9 252 aa12.15□□□□□ -0.46
MCF2L2-213ENST00000492331 GBA2Q9HCG7 927 aaPredicted RBP12.15□□□□□ -0.46
MCF2L2-213ENST00000492331 LRRFIP2Q9Y608 721 aaKnown RBP12.15□□□□□ -0.46
MCF2L2-213ENST00000492331 WNT10BO00744 389 aa12.14□□□□□ -0.47
MCF2L2-213ENST00000492331 PDE8BO95263 885 aa12.14□□□□□ -0.47
MCF2L2-213ENST00000492331 MMP14P50281 582 aa12.14□□□□□ -0.47
MCF2L2-213ENST00000492331 RBM5P52756 815 aaKnown RBP eCLIP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms