RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 MYH3P11055 1940 aa16.11■□□□□ 0.17
TREX1-204ENST00000492235 ZNF646O15015 1829 aaPredicted RBP16.11■□□□□ 0.17
TREX1-204ENST00000492235 APAF1O14727 1248 aa16.11■□□□□ 0.17
TREX1-204ENST00000492235 HDAC9Q9UKV0 1011 aa16.11■□□□□ 0.17
TREX1-204ENST00000492235 HPS5Q9UPZ3 1129 aa16.11■□□□□ 0.17
TREX1-204ENST00000492235 MED23Q9ULK4 1368 aa16.11■□□□□ 0.17
TREX1-204ENST00000492235 CALD1Q05682 793 aaKnown RBP16.1■□□□□ 0.17
TREX1-204ENST00000492235 MKRN3Q13064 507 aaKnown RBP16.1■□□□□ 0.17
TREX1-204ENST00000492235 DACT2Q5SW24 774 aa16.1■□□□□ 0.17
TREX1-204ENST00000492235 ZNF296Q8WUU4 475 aaPredicted RBP16.1■□□□□ 0.17
TREX1-204ENST00000492235 GREM2Q9H772 168 aa16.1■□□□□ 0.17
TREX1-204ENST00000492235 MINPP1Q9UNW1 487 aa16.1■□□□□ 0.17
TREX1-204ENST00000492235 WNT10BO00744 389 aa16.09■□□□□ 0.17
TREX1-204ENST00000492235 IGKV5-2P06315 115 aa16.09■□□□□ 0.17
TREX1-204ENST00000492235 CCDC30Q5VVM6 783 aa16.09■□□□□ 0.17
TREX1-204ENST00000492235 OGFOD1Q8N543 542 aa16.09■□□□□ 0.17
TREX1-204ENST00000492235 TTLL11Q8NHH1 800 aa16.09■□□□□ 0.17
TREX1-204ENST00000492235 BSDC1Q9NW68 430 aaPredicted RBP16.09■□□□□ 0.17
TREX1-204ENST00000492235 PI4KAP2A4QPH2 592 aa16.08■□□□□ 0.16
TREX1-204ENST00000492235 SASH1O94885 1247 aa16.08■□□□□ 0.16
TREX1-204ENST00000492235 NF2P35240 595 aa16.08■□□□□ 0.16
TREX1-204ENST00000492235 CCT4P50991 539 aaKnown RBP16.08■□□□□ 0.16
TREX1-204ENST00000492235 PI4KAP1Q8N8J0 262 aa16.08■□□□□ 0.16
TREX1-204ENST00000492235 PRKG1Q13976 671 aa16.07■□□□□ 0.16
TREX1-204ENST00000492235 PKN2Q16513 984 aaKnown RBP16.07■□□□□ 0.16
TREX1-204ENST00000492235 CWF19L2Q2TBE0 894 aaKnown RBP16.07■□□□□ 0.16
TREX1-204ENST00000492235 STRIP1Q5VSL9 837 aa16.07■□□□□ 0.16
TREX1-204ENST00000492235 PRPF38BQ5VTL8 546 aaKnown RBP16.07■□□□□ 0.16
TREX1-204ENST00000492235 KSR2Q6VAB6 950 aa16.07■□□□□ 0.16
TREX1-204ENST00000492235 TXNRD3Q86VQ6 643 aa16.07■□□□□ 0.16
TREX1-204ENST00000492235 TSPYL6Q8N831 410 aa16.07■□□□□ 0.16
TREX1-204ENST00000492235 MYO3BQ8WXR4 1341 aa16.07■□□□□ 0.16
TREX1-204ENST00000492235 TM4SF4P48230 202 aa16.06■□□□□ 0.16
TREX1-204ENST00000492235 NEXNQ0ZGT2 675 aa16.06■□□□□ 0.16
TREX1-204ENST00000492235 COA1Q9GZY4 146 aa16.06■□□□□ 0.16
TREX1-204ENST00000492235 GPR25O00155 361 aa16.05■□□□□ 0.16
TREX1-204ENST00000492235 PTPN12Q05209 780 aaKnown RBP16.05■□□□□ 0.16
TREX1-204ENST00000492235 UBE3BQ7Z3V4 1068 aa16.05■□□□□ 0.16
TREX1-204ENST00000492235 KIAA0825Q8IV33 1275 aa16.05■□□□□ 0.16
TREX1-204ENST00000492235 CHMP4AQ9BY43 222 aa16.05■□□□□ 0.16
TREX1-204ENST00000492235 NEURL1BA8MQ27 555 aa16.04■□□□□ 0.16
TREX1-204ENST00000492235 KLRK1P26718 216 aa16.04■□□□□ 0.16
TREX1-204ENST00000492235 IGHMBP2P38935 993 aaKnown RBP16.04■□□□□ 0.16
TREX1-204ENST00000492235 SREBF2Q12772 1141 aa16.04■□□□□ 0.16
TREX1-204ENST00000492235 TTLL5Q6EMB2 1281 aa16.04■□□□□ 0.16
TREX1-204ENST00000492235 ARMC9Q7Z3E5 817 aa16.04■□□□□ 0.16
TREX1-204ENST00000492235 APOBEC3FQ8IUX4 373 aaKnown RBP16.04■□□□□ 0.16
TREX1-204ENST00000492235 PRKRIP1Q9H875 184 aaPredicted RBP16.04■□□□□ 0.16
TREX1-204ENST00000492235 LEMD3Q9Y2U8 911 aa16.04■□□□□ 0.16
TREX1-204ENST00000492235 ZNF804BA4D1E1 1349 aa16.03■□□□□ 0.16
TREX1-204ENST00000492235 GTF2IP78347 998 aa16.03■□□□□ 0.16
TREX1-204ENST00000492235 TSR2Q969E8 191 aaKnown RBP16.03■□□□□ 0.16
TREX1-204ENST00000492235 STK31Q9BXU1 1019 aa16.03■□□□□ 0.16
TREX1-204ENST00000492235 R3HDMLQ9H3Y0 253 aa16.03■□□□□ 0.16
TREX1-204ENST00000492235 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.03■□□□□ 0.16
TREX1-204ENST00000492235 ANGEL1Q9UNK9 670 aaKnown RBP16.03■□□□□ 0.16
TREX1-204ENST00000492235 FZD1Q9UP38 647 aa16.03■□□□□ 0.16
TREX1-204ENST00000492235 H7C1W4 665 aa16.02■□□□□ 0.16
TREX1-204ENST00000492235 FKTNO75072 461 aa16.02■□□□□ 0.16
TREX1-204ENST00000492235 ITGA6P23229 1130 aa16.02■□□□□ 0.16
TREX1-204ENST00000492235 NOM1Q5C9Z4 860 aaKnown RBP16.02■□□□□ 0.16
TREX1-204ENST00000492235 FBXO46Q6PJ61 603 aaPredicted RBP16.02■□□□□ 0.16
TREX1-204ENST00000492235 G2E3Q7L622 706 aa16.02■□□□□ 0.16
TREX1-204ENST00000492235 ANKRD2Q9GZV1 360 aa16.02■□□□□ 0.16
TREX1-204ENST00000492235 KCNJ4P48050 445 aa16.01■□□□□ 0.15
TREX1-204ENST00000492235 MMP14P50281 582 aa16.01■□□□□ 0.15
TREX1-204ENST00000492235 LDLRAD1Q5T700 205 aa16.01■□□□□ 0.15
TREX1-204ENST00000492235 SPRYD7Q5W111 196 aa16.01■□□□□ 0.15
TREX1-204ENST00000492235 MPHOSPH8Q99549 860 aa16.01■□□□□ 0.15
TREX1-204ENST00000492235 ZBED3Q96IU2 234 aaPredicted RBP16■□□□□ 0.15
TREX1-204ENST00000492235 SLC4A2P04920 1241 aa15.99■□□□□ 0.15
TREX1-204ENST00000492235 CHRNDQ07001 517 aa15.99■□□□□ 0.15
TREX1-204ENST00000492235 GCKRQ14397 625 aa15.99■□□□□ 0.15
TREX1-204ENST00000492235 TWISTNBQ3B726 338 aaPredicted RBP15.99■□□□□ 0.15
TREX1-204ENST00000492235 PLA2G12BQ9BX93 195 aa15.99■□□□□ 0.15
TREX1-204ENST00000492235 CFHR5Q9BXR6 569 aa15.99■□□□□ 0.15
TREX1-204ENST00000492235 DEFB129Q9H1M3 183 aa15.99■□□□□ 0.15
TREX1-204ENST00000492235 SNAP23O00161 211 aa15.98■□□□□ 0.15
TREX1-204ENST00000492235 DLGAP5Q15398 846 aa15.98■□□□□ 0.15
TREX1-204ENST00000492235 SLC10A4Q96EP9 437 aa15.98■□□□□ 0.15
TREX1-204ENST00000492235 CD209Q9NNX6 404 aa15.98■□□□□ 0.15
TREX1-204ENST00000492235 PCDHAC2Q9Y5I4 1007 aa15.98■□□□□ 0.15
TREX1-204ENST00000492235 ECM29Q5VYK3 1845 aa15.98■□□□□ 0.15
TREX1-204ENST00000492235 COL1A1P02452 1464 aaPredicted RBP15.97■□□□□ 0.15
TREX1-204ENST00000492235 F8W031 263 aaPredicted RBP15.97■□□□□ 0.15
TREX1-204ENST00000492235 TAF5LO75529 589 aa15.97■□□□□ 0.15
TREX1-204ENST00000492235 ALDH1A1P00352 501 aa15.97■□□□□ 0.15
TREX1-204ENST00000492235 CSF1RP07333 972 aa15.97■□□□□ 0.15
TREX1-204ENST00000492235 CASP7P55210 303 aa15.97■□□□□ 0.15
TREX1-204ENST00000492235 IFNL1Q8IU54 200 aa15.97■□□□□ 0.15
TREX1-204ENST00000492235 CERS5Q8N5B7 392 aa15.97■□□□□ 0.15
TREX1-204ENST00000492235 CLMNQ96JQ2 1002 aa15.97■□□□□ 0.15
TREX1-204ENST00000492235 SSC5DA1L4H1 1573 aa15.96■□□□□ 0.15
TREX1-204ENST00000492235 A0A1B0GUL6 1792 aa15.96■□□□□ 0.15
TREX1-204ENST00000492235 CLRN2A0PK11 232 aa15.96■□□□□ 0.15
TREX1-204ENST00000492235 ANKRD18BA2A2Z9 1011 aa15.96■□□□□ 0.15
TREX1-204ENST00000492235 MANSC4A6NHS7 340 aaPredicted RBP15.96■□□□□ 0.15
TREX1-204ENST00000492235 FLIIQ13045 1269 aa15.96■□□□□ 0.15
TREX1-204ENST00000492235 HELBQ8NG08 1087 aaPredicted RBP15.96■□□□□ 0.15
TREX1-204ENST00000492235 WNK4Q96J92 1243 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms