RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 RSBN1LQ6PCB5 846 aaPredicted RBP18.97■□□□□ 0.63
CDC42SE1-205ENST00000491825 UBE3BQ7Z3V4 1068 aa18.97■□□□□ 0.63
CDC42SE1-205ENST00000491825 GMLQ99445 158 aa18.97■□□□□ 0.63
CDC42SE1-205ENST00000491825 PLA2G12BQ9BX93 195 aa18.97■□□□□ 0.63
CDC42SE1-205ENST00000491825 API5Q9BZZ5 524 aaKnown RBP18.97■□□□□ 0.63
CDC42SE1-205ENST00000491825 RCAN3Q9UKA8 241 aa18.97■□□□□ 0.63
CDC42SE1-205ENST00000491825 MINPP1Q9UNW1 487 aa18.97■□□□□ 0.63
CDC42SE1-205ENST00000491825 ADM5C9JUS6 153 aa18.96■□□□□ 0.63
CDC42SE1-205ENST00000491825 IPO8O15397 1037 aaKnown RBP18.96■□□□□ 0.63
CDC42SE1-205ENST00000491825 GCKRQ14397 625 aa18.96■□□□□ 0.63
CDC42SE1-205ENST00000491825 RBM26Q5T8P6 1007 aaKnown RBP18.96■□□□□ 0.63
CDC42SE1-205ENST00000491825 AGBL3Q8NEM8 1001 aa18.96■□□□□ 0.63
CDC42SE1-205ENST00000491825 ASTN2O75129 1339 aaPredicted RBP18.96■□□□□ 0.63
CDC42SE1-205ENST00000491825 PODNQ7Z5L7 613 aa18.95■□□□□ 0.62
CDC42SE1-205ENST00000491825 GGA3Q9NZ52 723 aa18.95■□□□□ 0.62
CDC42SE1-205ENST00000491825 G3V3G9 751 aa18.94■□□□□ 0.62
CDC42SE1-205ENST00000491825 HUNKP57058 714 aa18.94■□□□□ 0.62
CDC42SE1-205ENST00000491825 DCAF8Q5TAQ9 597 aa18.94■□□□□ 0.62
CDC42SE1-205ENST00000491825 ATF7IPQ6VMQ6 1270 aa18.94■□□□□ 0.62
CDC42SE1-205ENST00000491825 DCPSQ96C86 337 aaKnown RBP18.94■□□□□ 0.62
CDC42SE1-205ENST00000491825 PSME4Q14997 1843 aa18.93■□□□□ 0.62
CDC42SE1-205ENST00000491825 ALDH1L1O75891 902 aa18.93■□□□□ 0.62
CDC42SE1-205ENST00000491825 TRIM27P14373 513 aa18.93■□□□□ 0.62
CDC42SE1-205ENST00000491825 CCT4P50991 539 aaKnown RBP18.93■□□□□ 0.62
CDC42SE1-205ENST00000491825 ZIC5Q96T25 663 aa18.93■□□□□ 0.62
CDC42SE1-205ENST00000491825 BEGAINQ9BUH8 593 aa18.93■□□□□ 0.62
CDC42SE1-205ENST00000491825 SRCIN1Q9C0H9 1055 aa18.93■□□□□ 0.62
CDC42SE1-205ENST00000491825 GBA2Q9HCG7 927 aaPredicted RBP18.93■□□□□ 0.62
CDC42SE1-205ENST00000491825 USP17L3A6NCW0 530 aa18.92■□□□□ 0.62
CDC42SE1-205ENST00000491825 USP17L4A6NCW7 530 aa18.92■□□□□ 0.62
CDC42SE1-205ENST00000491825 CSF1RP07333 972 aa18.92■□□□□ 0.62
CDC42SE1-205ENST00000491825 FAM161AQ3B820 660 aa18.92■□□□□ 0.62
CDC42SE1-205ENST00000491825 ZKSCAN2Q63HK3 967 aa18.92■□□□□ 0.62
CDC42SE1-205ENST00000491825 SLC4A10Q6U841 1118 aa18.92■□□□□ 0.62
CDC42SE1-205ENST00000491825 USP17L1Q7RTZ2 530 aa18.92■□□□□ 0.62
CDC42SE1-205ENST00000491825 FAM155AB1AL88 458 aaPredicted RBP18.91■□□□□ 0.62
CDC42SE1-205ENST00000491825 USP17L8P0C7I0 530 aa18.91■□□□□ 0.62
CDC42SE1-205ENST00000491825 ITGA6P23229 1130 aa18.91■□□□□ 0.62
CDC42SE1-205ENST00000491825 NOGQ13253 232 aa18.91■□□□□ 0.62
CDC42SE1-205ENST00000491825 TXNRD3Q86VQ6 643 aa18.91■□□□□ 0.62
CDC42SE1-205ENST00000491825 SULF1Q8IWU6 871 aa18.91■□□□□ 0.62
CDC42SE1-205ENST00000491825 FRAT1Q92837 279 aaPredicted RBP18.91■□□□□ 0.62
CDC42SE1-205ENST00000491825 TSKSQ9UJT2 592 aa18.91■□□□□ 0.62
CDC42SE1-205ENST00000491825 ZNF646O15015 1829 aaPredicted RBP18.9■□□□□ 0.62
CDC42SE1-205ENST00000491825 MYH3P11055 1940 aa18.9■□□□□ 0.62
CDC42SE1-205ENST00000491825 CA12O43570 354 aa18.9■□□□□ 0.62
CDC42SE1-205ENST00000491825 IGHMBP2P38935 993 aaKnown RBP18.9■□□□□ 0.62
CDC42SE1-205ENST00000491825 SCARF1Q14162 830 aa18.9■□□□□ 0.62
CDC42SE1-205ENST00000491825 DACT2Q5SW24 774 aa18.9■□□□□ 0.62
CDC42SE1-205ENST00000491825 ANGEL2Q5VTE6 544 aaKnown RBP18.9■□□□□ 0.62
CDC42SE1-205ENST00000491825 MYOZ2Q9NPC6 264 aa18.9■□□□□ 0.62
CDC42SE1-205ENST00000491825 KLRK1P26718 216 aa18.89■□□□□ 0.61
CDC42SE1-205ENST00000491825 RGMBQ6NW40 437 aa18.89■□□□□ 0.61
CDC42SE1-205ENST00000491825 CDCA5Q96FF9 252 aa18.89■□□□□ 0.61
CDC42SE1-205ENST00000491825 LEMD3Q9Y2U8 911 aa18.89■□□□□ 0.61
CDC42SE1-205ENST00000491825 UTYO14607 1347 aa18.89■□□□□ 0.61
CDC42SE1-205ENST00000491825 PITPNM2Q9BZ72 1349 aa18.89■□□□□ 0.61
CDC42SE1-205ENST00000491825 GRM8O00222 908 aa18.88■□□□□ 0.61
CDC42SE1-205ENST00000491825 INTS3Q68E01 1043 aaKnown RBP18.88■□□□□ 0.61
CDC42SE1-205ENST00000491825 C2orf69Q8N8R5 385 aa18.88■□□□□ 0.61
CDC42SE1-205ENST00000491825 ABHD8Q96I13 439 aa18.88■□□□□ 0.61
CDC42SE1-205ENST00000491825 MXD3Q9BW11 206 aa18.88■□□□□ 0.61
CDC42SE1-205ENST00000491825 COA1Q9GZY4 146 aa18.88■□□□□ 0.61
CDC42SE1-205ENST00000491825 SPEF2Q9C093 1822 aa18.88■□□□□ 0.61
CDC42SE1-205ENST00000491825 ZNF804BA4D1E1 1349 aa18.87■□□□□ 0.61
CDC42SE1-205ENST00000491825 STRIP1Q5VSL9 837 aa18.87■□□□□ 0.61
CDC42SE1-205ENST00000491825 IRS2Q9Y4H2 1338 aa18.87■□□□□ 0.61
CDC42SE1-205ENST00000491825 FOXO4P98177 505 aa18.86■□□□□ 0.61
CDC42SE1-205ENST00000491825 CHRNDQ07001 517 aa18.86■□□□□ 0.61
CDC42SE1-205ENST00000491825 ANKRD2Q9GZV1 360 aa18.86■□□□□ 0.61
CDC42SE1-205ENST00000491825 MYO3BQ8WXR4 1341 aa18.85■□□□□ 0.61
CDC42SE1-205ENST00000491825 MS4A1P11836 297 aa18.85■□□□□ 0.61
CDC42SE1-205ENST00000491825 NBPF9Q3BBW0 867 aa18.85■□□□□ 0.61
CDC42SE1-205ENST00000491825 FTSJ3Q8IY81 847 aaKnown RBP18.85■□□□□ 0.61
CDC42SE1-205ENST00000491825 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.85■□□□□ 0.61
CDC42SE1-205ENST00000491825 CCDC102AQ96A19 550 aa18.85■□□□□ 0.61
CDC42SE1-205ENST00000491825 MPHOSPH8Q99549 860 aa18.85■□□□□ 0.61
CDC42SE1-205ENST00000491825 SLC10A3P09131 477 aa18.84■□□□□ 0.61
CDC42SE1-205ENST00000491825 DZIP1LQ8IYY4 767 aaKnown RBP18.84■□□□□ 0.61
CDC42SE1-205ENST00000491825 C9orf78Q9NZ63 289 aaPredicted RBP18.84■□□□□ 0.61
CDC42SE1-205ENST00000491825 TNNQ9UQP3 1299 aa18.84■□□□□ 0.61
CDC42SE1-205ENST00000491825 ANKRD18BA2A2Z9 1011 aa18.83■□□□□ 0.6
CDC42SE1-205ENST00000491825 SNAP23O00161 211 aa18.83■□□□□ 0.6
CDC42SE1-205ENST00000491825 WNT10BO00744 389 aa18.83■□□□□ 0.6
CDC42SE1-205ENST00000491825 ZNF157P51786 506 aaPredicted RBP18.83■□□□□ 0.6
CDC42SE1-205ENST00000491825 FKBP1BP68106 108 aa18.83■□□□□ 0.6
CDC42SE1-205ENST00000491825 KIF23Q02241 960 aaPredicted RBP18.83■□□□□ 0.6
CDC42SE1-205ENST00000491825 EPHA10Q5JZY3 1008 aa18.83■□□□□ 0.6
CDC42SE1-205ENST00000491825 CLUAP1Q96AJ1 413 aa18.83■□□□□ 0.6
CDC42SE1-205ENST00000491825 USP44Q9H0E7 712 aa18.83■□□□□ 0.6
CDC42SE1-205ENST00000491825 SCAF8Q9UPN6 1271 aaKnown RBP18.83■□□□□ 0.6
CDC42SE1-205ENST00000491825 PAPPA2Q9BXP8 1791 aa18.83■□□□□ 0.6
CDC42SE1-205ENST00000491825 POLR2AP24928 1970 aaKnown RBP18.82■□□□□ 0.6
CDC42SE1-205ENST00000491825 NBPF7P0C2Y1 421 aaPredicted RBP18.82■□□□□ 0.6
CDC42SE1-205ENST00000491825 RLBP1P12271 317 aa18.82■□□□□ 0.6
CDC42SE1-205ENST00000491825 C15orf52Q6ZUT6 534 aaKnown RBP18.82■□□□□ 0.6
CDC42SE1-205ENST00000491825 RASAL3Q86YV0 1011 aa18.82■□□□□ 0.6
CDC42SE1-205ENST00000491825 ZBED3Q96IU2 234 aaPredicted RBP18.82■□□□□ 0.6
CDC42SE1-205ENST00000491825 MMP14P50281 582 aa18.81■□□□□ 0.6
CDC42SE1-205ENST00000491825 IFIT5Q13325 482 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms