RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 TXNRD3Q86VQ6 643 aa29■■■□□ 2.23
CPNE9-204ENST00000491802 DPF2Q92785 391 aa29■■■□□ 2.23
CPNE9-204ENST00000491802 SRGAP3O43295 1099 aa28.99■■■□□ 2.23
CPNE9-204ENST00000491802 RPS12P25398 132 aaKnown RBP28.99■■■□□ 2.23
CPNE9-204ENST00000491802 MTX1Q13505 466 aa28.99■■■□□ 2.23
CPNE9-204ENST00000491802 CHADLQ6NUI6 762 aa28.99■■■□□ 2.23
CPNE9-204ENST00000491802 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.99■■■□□ 2.23
CPNE9-204ENST00000491802 IRS2Q9Y4H2 1338 aa28.98■■■□□ 2.23
CPNE9-204ENST00000491802 EYA2O00167 538 aa28.98■■■□□ 2.23
CPNE9-204ENST00000491802 PSMD14O00487 310 aa28.98■■■□□ 2.23
CPNE9-204ENST00000491802 ZBTB7BO15156 539 aaPredicted RBP28.98■■■□□ 2.23
CPNE9-204ENST00000491802 GMPSP49915 693 aaPredicted RBP28.98■■■□□ 2.23
CPNE9-204ENST00000491802 COA1Q9GZY4 146 aa28.98■■■□□ 2.23
CPNE9-204ENST00000491802 SIL1Q9H173 461 aa28.98■■■□□ 2.23
CPNE9-204ENST00000491802 C1orf115Q9H7X2 142 aa28.98■■■□□ 2.23
CPNE9-204ENST00000491802 KCNQ5Q9NR82 932 aa28.98■■■□□ 2.23
CPNE9-204ENST00000491802 VIL1P09327 827 aaKnown RBP28.97■■■□□ 2.23
CPNE9-204ENST00000491802 EPS15P42566 896 aa28.97■■■□□ 2.23
CPNE9-204ENST00000491802 USP50Q70EL3 339 aaPredicted RBP28.97■■■□□ 2.23
CPNE9-204ENST00000491802 POTEIP0CG38 1075 aa28.96■■■□□ 2.23
CPNE9-204ENST00000491802 POTEJP0CG39 1038 aa28.96■■■□□ 2.23
CPNE9-204ENST00000491802 MVPQ14764 893 aaKnown RBP28.96■■■□□ 2.23
CPNE9-204ENST00000491802 ADARB2Q9NS39 739 aaKnown RBP28.96■■■□□ 2.23
CPNE9-204ENST00000491802 PA2G4Q9UQ80 394 aaKnown RBP28.96■■■□□ 2.23
CPNE9-204ENST00000491802 COG6Q9Y2V7 657 aa28.96■■■□□ 2.23
CPNE9-204ENST00000491802 UBE4AQ14139 1066 aa28.95■■■□□ 2.22
CPNE9-204ENST00000491802 VGLL2Q8N8G2 317 aa28.95■■■□□ 2.22
CPNE9-204ENST00000491802 CIAO1O76071 339 aa28.94■■■□□ 2.22
CPNE9-204ENST00000491802 ATG9AQ7Z3C6 839 aa28.94■■■□□ 2.22
CPNE9-204ENST00000491802 COPRSQ9NQ92 184 aa28.94■■■□□ 2.22
CPNE9-204ENST00000491802 FBXO3Q9UK99 471 aa28.94■■■□□ 2.22
CPNE9-204ENST00000491802 ZBTB12Q9Y330 459 aaPredicted RBP28.94■■■□□ 2.22
CPNE9-204ENST00000491802 PNMA6EA0A0J9YXQ4 647 aa28.93■■■□□ 2.22
CPNE9-204ENST00000491802 PDE8BO95263 885 aa28.93■■■□□ 2.22
CPNE9-204ENST00000491802 APLP1P51693 650 aa28.93■■■□□ 2.22
CPNE9-204ENST00000491802 C20orf194Q5TEA3 1177 aa28.93■■■□□ 2.22
CPNE9-204ENST00000491802 PDE3AQ14432 1141 aa28.92■■■□□ 2.22
CPNE9-204ENST00000491802 EAPPQ56P03 285 aaPredicted RBP28.92■■■□□ 2.22
CPNE9-204ENST00000491802 ZNF804AQ7Z570 1209 aa28.92■■■□□ 2.22
CPNE9-204ENST00000491802 AGBL3Q8NEM8 1001 aa28.92■■■□□ 2.22
CPNE9-204ENST00000491802 DDX19BQ9UMR2 479 aa28.92■■■□□ 2.22
CPNE9-204ENST00000491802 CNOT7Q9UIV1 285 aaKnown RBP28.91■■■□□ 2.22
CPNE9-204ENST00000491802 USP17L3A6NCW0 530 aa28.9■■■□□ 2.22
CPNE9-204ENST00000491802 USP17L4A6NCW7 530 aa28.9■■■□□ 2.22
CPNE9-204ENST00000491802 PUM3Q15397 648 aaKnown RBP28.9■■■□□ 2.22
CPNE9-204ENST00000491802 RSBN1LQ6PCB5 846 aaPredicted RBP28.9■■■□□ 2.22
CPNE9-204ENST00000491802 USP17L1Q7RTZ2 530 aa28.9■■■□□ 2.22
CPNE9-204ENST00000491802 FBXW7Q969H0 707 aa28.9■■■□□ 2.22
CPNE9-204ENST00000491802 CD209Q9NNX6 404 aa28.9■■■□□ 2.22
CPNE9-204ENST00000491802 H7C1D1 291 aa28.89■■■□□ 2.22
CPNE9-204ENST00000491802 IL15P40933 162 aaPredicted RBP28.89■■■□□ 2.22
CPNE9-204ENST00000491802 STRIP1Q5VSL9 837 aa28.89■■■□□ 2.22
CPNE9-204ENST00000491802 MICALL2Q8IY33 904 aa28.88■■■□□ 2.21
CPNE9-204ENST00000491802 GMLQ99445 158 aa28.88■■■□□ 2.21
CPNE9-204ENST00000491802 PGAP2Q9UHJ9 254 aa28.88■■■□□ 2.21
CPNE9-204ENST00000491802 PASKQ96RG2 1323 aa28.88■■■□□ 2.21
CPNE9-204ENST00000491802 ITGBL1O95965 494 aaPredicted RBP28.87■■■□□ 2.21
CPNE9-204ENST00000491802 GYG1P46976 350 aa28.87■■■□□ 2.21
CPNE9-204ENST00000491802 ZC3H15Q8WU90 426 aaKnown RBP28.87■■■□□ 2.21
CPNE9-204ENST00000491802 MYO3BQ8WXR4 1341 aa28.87■■■□□ 2.21
CPNE9-204ENST00000491802 CEP350Q5VT06 3117 aa28.86■■■□□ 2.21
CPNE9-204ENST00000491802 SHTN1A0MZ66 631 aa28.86■■■□□ 2.21
CPNE9-204ENST00000491802 IL1R1P14778 569 aa28.86■■■□□ 2.21
CPNE9-204ENST00000491802 FGFR2P21802 821 aa28.86■■■□□ 2.21
CPNE9-204ENST00000491802 MMP14P50281 582 aa28.86■■■□□ 2.21
CPNE9-204ENST00000491802 RRP1P56182 461 aaKnown RBP28.86■■■□□ 2.21
CPNE9-204ENST00000491802 ATP8B2P98198 1209 aa28.86■■■□□ 2.21
CPNE9-204ENST00000491802 POLA2Q14181 598 aa28.86■■■□□ 2.21
CPNE9-204ENST00000491802 DACT2Q5SW24 774 aa28.86■■■□□ 2.21
CPNE9-204ENST00000491802 CEP126Q9P2H0 1117 aa28.86■■■□□ 2.21
CPNE9-204ENST00000491802 CLEC11AQ9Y240 323 aa28.86■■■□□ 2.21
CPNE9-204ENST00000491802 ZNF280AP59817 542 aaPredicted RBP28.85■■■□□ 2.21
CPNE9-204ENST00000491802 CEP85Q6P2H3 762 aa28.85■■■□□ 2.21
CPNE9-204ENST00000491802 SSH3Q8TE77 659 aa28.85■■■□□ 2.21
CPNE9-204ENST00000491802 IFIT1P09914 478 aaKnown RBP28.84■■■□□ 2.21
CPNE9-204ENST00000491802 SLC5A1P13866 664 aa28.84■■■□□ 2.21
CPNE9-204ENST00000491802 HIBADHP31937 336 aaKnown RBP28.84■■■□□ 2.21
CPNE9-204ENST00000491802 GTF2IP78347 998 aa28.84■■■□□ 2.21
CPNE9-204ENST00000491802 FAM84BQ96KN1 310 aaPredicted RBP28.84■■■□□ 2.21
CPNE9-204ENST00000491802 ATP2B3Q16720 1220 aa28.83■■■□□ 2.21
CPNE9-204ENST00000491802 TTLL5Q6EMB2 1281 aa28.83■■■□□ 2.21
CPNE9-204ENST00000491802 CNTROBQ8N137 903 aa28.83■■■□□ 2.21
CPNE9-204ENST00000491802 LPIN2Q92539 896 aa28.83■■■□□ 2.21
CPNE9-204ENST00000491802 MXD3Q9BW11 206 aa28.83■■■□□ 2.21
CPNE9-204ENST00000491802 CHMP4BQ9H444 224 aaKnown RBP28.83■■■□□ 2.21
CPNE9-204ENST00000491802 ZBTB40Q9NUA8 1239 aa28.83■■■□□ 2.21
CPNE9-204ENST00000491802 HIRAP54198 1017 aaPredicted RBP28.82■■■□□ 2.2
CPNE9-204ENST00000491802 CAVIN4Q5BKX8 364 aa28.82■■■□□ 2.2
CPNE9-204ENST00000491802 VPS37DQ86XT2 251 aa28.82■■■□□ 2.2
CPNE9-204ENST00000491802 TRPM4Q8TD43 1214 aa28.82■■■□□ 2.2
CPNE9-204ENST00000491802 MAP1SQ66K74 1059 aaPredicted RBP28.81■■■□□ 2.2
CPNE9-204ENST00000491802 TRPM7Q96QT4 1865 aa28.8■■■□□ 2.2
CPNE9-204ENST00000491802 FKBP1AP62942 108 aaKnown RBP28.8■■■□□ 2.2
CPNE9-204ENST00000491802 G3BP1Q13283 466 aaKnown RBP eCLIP28.8■■■□□ 2.2
CPNE9-204ENST00000491802 FBXO33Q7Z6M2 555 aa28.8■■■□□ 2.2
CPNE9-204ENST00000491802 USP17L8P0C7I0 530 aa28.79■■■□□ 2.2
CPNE9-204ENST00000491802 TFCP2Q12800 502 aa28.79■■■□□ 2.2
CPNE9-204ENST00000491802 SAMD7Q7Z3H4 446 aa28.79■■■□□ 2.2
CPNE9-204ENST00000491802 TDRD7Q8NHU6 1098 aaKnown RBP28.79■■■□□ 2.2
CPNE9-204ENST00000491802 JAG2Q9Y219 1238 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms