RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 TRIM28Q13263 835 aaKnown RBP14.51□□□□□ -0.09
CLCNKA-206ENST00000491433 TTLL12Q14166 644 aaPredicted RBP14.51□□□□□ -0.09
CLCNKA-206ENST00000491433 PODNQ7Z5L7 613 aa14.51□□□□□ -0.09
CLCNKA-206ENST00000491433 ZNF333Q96JL9 665 aa14.51□□□□□ -0.09
CLCNKA-206ENST00000491433 DBF4Q9UBU7 674 aaPredicted RBP14.51□□□□□ -0.09
CLCNKA-206ENST00000491433 NR2E3Q9Y5X4 410 aa14.51□□□□□ -0.09
CLCNKA-206ENST00000491433 ALDH1A1P00352 501 aa14.5□□□□□ -0.09
CLCNKA-206ENST00000491433 NBPF11Q86T75 865 aa14.5□□□□□ -0.09
CLCNKA-206ENST00000491433 ASTN2O75129 1339 aaPredicted RBP14.49□□□□□ -0.09
CLCNKA-206ENST00000491433 USP17L3A6NCW0 530 aa14.49□□□□□ -0.09
CLCNKA-206ENST00000491433 USP17L4A6NCW7 530 aa14.49□□□□□ -0.09
CLCNKA-206ENST00000491433 CCDC152Q4G0S7 254 aa14.49□□□□□ -0.09
CLCNKA-206ENST00000491433 HDGFL1Q5TGJ6 251 aa14.49□□□□□ -0.09
CLCNKA-206ENST00000491433 USP17L1Q7RTZ2 530 aa14.49□□□□□ -0.09
CLCNKA-206ENST00000491433 OGFOD1Q8N543 542 aa14.49□□□□□ -0.09
CLCNKA-206ENST00000491433 ERO1AQ96HE7 468 aa14.49□□□□□ -0.09
CLCNKA-206ENST00000491433 R3HDMLQ9H3Y0 253 aa14.49□□□□□ -0.09
CLCNKA-206ENST00000491433 HYPKQ9NX55 129 aa14.49□□□□□ -0.09
CLCNKA-206ENST00000491433 MTMR10Q9NXD2 777 aa14.49□□□□□ -0.09
CLCNKA-206ENST00000491433 CHPF2Q9P2E5 772 aa14.49□□□□□ -0.09
CLCNKA-206ENST00000491433 TTC28Q96AY4 2481 aa14.49□□□□□ -0.09
CLCNKA-206ENST00000491433 XDHP47989 1333 aa14.48□□□□□ -0.09
CLCNKA-206ENST00000491433 SPTBN5Q9NRC6 3674 aaKnown RBP14.48□□□□□ -0.09
CLCNKA-206ENST00000491433 ATP5J2-PTCD1G3V325 749 aa14.48□□□□□ -0.09
CLCNKA-206ENST00000491433 UBE2Q2LH0YL09 131 aa14.48□□□□□ -0.09
CLCNKA-206ENST00000491433 ATP2B4P23634 1241 aa14.48□□□□□ -0.09
CLCNKA-206ENST00000491433 INHBEP58166 350 aa14.48□□□□□ -0.09
CLCNKA-206ENST00000491433 Q7L0L9 218 aa14.48□□□□□ -0.09
CLCNKA-206ENST00000491433 ARMC9Q7Z3E5 817 aa14.48□□□□□ -0.09
CLCNKA-206ENST00000491433 ZBTB38Q8NAP3 1195 aaPredicted RBP14.48□□□□□ -0.09
CLCNKA-206ENST00000491433 GMLQ99445 158 aa14.48□□□□□ -0.09
CLCNKA-206ENST00000491433 HTATIP2Q9BUP3 242 aa14.48□□□□□ -0.09
CLCNKA-206ENST00000491433 RAPGEFL1Q9UHV5 662 aa14.48□□□□□ -0.09
CLCNKA-206ENST00000491433 MYO3BQ8WXR4 1341 aa14.47□□□□□ -0.09
CLCNKA-206ENST00000491433 TMPOP42166 694 aaKnown RBP14.47□□□□□ -0.09
CLCNKA-206ENST00000491433 CHL1O00533 1208 aa14.46□□□□□ -0.09
CLCNKA-206ENST00000491433 SLC9C1Q4G0N8 1177 aa14.46□□□□□ -0.09
CLCNKA-206ENST00000491433 RTL5Q5HYW3 569 aaPredicted RBP14.46□□□□□ -0.09
CLCNKA-206ENST00000491433 EFCC1Q9HA90 598 aa14.46□□□□□ -0.09
CLCNKA-206ENST00000491433 PDE8AO60658 829 aa14.45□□□□□ -0.1
CLCNKA-206ENST00000491433 GOLGA2Q08379 1002 aa14.45□□□□□ -0.1
CLCNKA-206ENST00000491433 RIC3Q7Z5B4 369 aa14.45□□□□□ -0.1
CLCNKA-206ENST00000491433 ANKRD18AQ8IVF6 992 aa14.45□□□□□ -0.1
CLCNKA-206ENST00000491433 MANSC4A6NHS7 340 aaPredicted RBP14.44□□□□□ -0.1
CLCNKA-206ENST00000491433 MOB2Q70IA6 237 aa14.44□□□□□ -0.1
CLCNKA-206ENST00000491433 APOBEC3FQ8IUX4 373 aaKnown RBP14.44□□□□□ -0.1
CLCNKA-206ENST00000491433 CCDC191Q8NCU4 936 aa14.44□□□□□ -0.1
CLCNKA-206ENST00000491433 ZNF428Q96B54 188 aa14.44□□□□□ -0.1
CLCNKA-206ENST00000491433 CDC5LQ99459 802 aaKnown RBP14.44□□□□□ -0.1
CLCNKA-206ENST00000491433 SEC31BQ9NQW1 1179 aa14.44□□□□□ -0.1
CLCNKA-206ENST00000491433 COL4A1P02462 1669 aa14.43□□□□□ -0.1
CLCNKA-206ENST00000491433 WTIPA6NIX2 430 aaPredicted RBP14.43□□□□□ -0.1
CLCNKA-206ENST00000491433 WNT10BO00744 389 aa14.43□□□□□ -0.1
CLCNKA-206ENST00000491433 ZBTB7BO15156 539 aaPredicted RBP14.43□□□□□ -0.1
CLCNKA-206ENST00000491433 PCCAP05165 728 aaPredicted RBP14.43□□□□□ -0.1
CLCNKA-206ENST00000491433 NBPF9Q3BBW0 867 aa14.43□□□□□ -0.1
CLCNKA-206ENST00000491433 SYMPKQ92797 1274 aaKnown RBP14.43□□□□□ -0.1
CLCNKA-206ENST00000491433 SNX27Q96L92 541 aa14.43□□□□□ -0.1
CLCNKA-206ENST00000491433 CHMP4AQ9BY43 222 aa14.43□□□□□ -0.1
CLCNKA-206ENST00000491433 LAS1LQ9Y4W2 734 aaKnown RBP14.43□□□□□ -0.1
CLCNKA-206ENST00000491433 MED23Q9ULK4 1368 aa14.43□□□□□ -0.1
CLCNKA-206ENST00000491433 UNCXA6NJT0 531 aa14.42□□□□□ -0.1
CLCNKA-206ENST00000491433 MKRN3Q13064 507 aaKnown RBP14.42□□□□□ -0.1
CLCNKA-206ENST00000491433 STRIP1Q5VSL9 837 aa14.42□□□□□ -0.1
CLCNKA-206ENST00000491433 SPRYD7Q5W111 196 aa14.42□□□□□ -0.1
CLCNKA-206ENST00000491433 OTUD7BQ6GQQ9 843 aa14.42□□□□□ -0.1
CLCNKA-206ENST00000491433 CD99L2Q8TCZ2 262 aa14.42□□□□□ -0.1
CLCNKA-206ENST00000491433 COL1A1P02452 1464 aaPredicted RBP14.42□□□□□ -0.1
CLCNKA-206ENST00000491433 RPTORQ8N122 1335 aa14.41□□□□□ -0.1
CLCNKA-206ENST00000491433 CACNA1AO00555 2505 aa14.41□□□□□ -0.1
CLCNKA-206ENST00000491433 ZBTB48P10074 688 aaPredicted RBP14.41□□□□□ -0.1
CLCNKA-206ENST00000491433 PTPN12Q05209 780 aaKnown RBP14.41□□□□□ -0.1
CLCNKA-206ENST00000491433 KRT24Q2M2I5 525 aa14.41□□□□□ -0.1
CLCNKA-206ENST00000491433 PRAMEF18Q5VWM3 479 aa14.41□□□□□ -0.1
CLCNKA-206ENST00000491433 SLC10A4Q96EP9 437 aa14.41□□□□□ -0.1
CLCNKA-206ENST00000491433 COA1Q9GZY4 146 aa14.41□□□□□ -0.1
CLCNKA-206ENST00000491433 CWC25Q9NXE8 425 aaPredicted RBP14.41□□□□□ -0.1
CLCNKA-206ENST00000491433 DDX58O95786 925 aaKnown RBP14.4□□□□□ -0.1
CLCNKA-206ENST00000491433 MYCP01106 439 aaPredicted RBP14.4□□□□□ -0.1
CLCNKA-206ENST00000491433 NEUROD2Q15784 382 aa14.4□□□□□ -0.1
CLCNKA-206ENST00000491433 DACT2Q5SW24 774 aa14.4□□□□□ -0.1
CLCNKA-206ENST00000491433 LDLRAD1Q5T700 205 aa14.4□□□□□ -0.1
CLCNKA-206ENST00000491433 DUSP27Q5VZP5 1158 aa14.4□□□□□ -0.1
CLCNKA-206ENST00000491433 LAMB1P07942 1786 aa14.39□□□□□ -0.11
CLCNKA-206ENST00000491433 MYH3P11055 1940 aa14.39□□□□□ -0.11
CLCNKA-206ENST00000491433 PPP1R12BO60237 982 aaPredicted RBP14.39□□□□□ -0.11
CLCNKA-206ENST00000491433 ARHGEF6Q15052 776 aa14.39□□□□□ -0.11
CLCNKA-206ENST00000491433 IFNL1Q8IU54 200 aa14.39□□□□□ -0.11
CLCNKA-206ENST00000491433 FBXW7Q969H0 707 aa14.39□□□□□ -0.11
CLCNKA-206ENST00000491433 MYD88Q99836 296 aa14.39□□□□□ -0.11
CLCNKA-206ENST00000491433 BSDC1Q9NW68 430 aaPredicted RBP14.39□□□□□ -0.11
CLCNKA-206ENST00000491433 STAP2Q9UGK3 403 aa14.39□□□□□ -0.11
CLCNKA-206ENST00000491433 ANGEL1Q9UNK9 670 aaKnown RBP14.39□□□□□ -0.11
CLCNKA-206ENST00000491433 PPP2R3BQ9Y5P8 575 aa14.39□□□□□ -0.11
CLCNKA-206ENST00000491433 CCT4P50991 539 aaKnown RBP14.38□□□□□ -0.11
CLCNKA-206ENST00000491433 RALBP1Q15311 655 aa14.38□□□□□ -0.11
CLCNKA-206ENST00000491433 MAP3K11Q16584 847 aa14.38□□□□□ -0.11
CLCNKA-206ENST00000491433 SCAF8Q9UPN6 1271 aaKnown RBP14.38□□□□□ -0.11
CLCNKA-206ENST00000491433 LEMD3Q9Y2U8 911 aa14.38□□□□□ -0.11
CLCNKA-206ENST00000491433 ZNF646O15015 1829 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms