RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 ZNF609O15014 1411 aa10.47□□□□□ -0.73
LSM2-213ENST00000491421 USP17L8P0C7I0 530 aa10.46□□□□□ -0.73
LSM2-213ENST00000491421 ZNF280AP59817 542 aaPredicted RBP10.46□□□□□ -0.73
LSM2-213ENST00000491421 MAP2K1Q02750 393 aaPredicted RBP10.46□□□□□ -0.73
LSM2-213ENST00000491421 CHRNDQ07001 517 aa10.46□□□□□ -0.73
LSM2-213ENST00000491421 CYP4F22Q6NT55 531 aa10.46□□□□□ -0.73
LSM2-213ENST00000491421 LMBR1LQ6UX01 489 aa10.46□□□□□ -0.73
LSM2-213ENST00000491421 TXNRD3Q86VQ6 643 aa10.46□□□□□ -0.73
LSM2-213ENST00000491421 FBXW7Q969H0 707 aa10.46□□□□□ -0.73
LSM2-213ENST00000491421 GMLQ99445 158 aa10.46□□□□□ -0.73
LSM2-213ENST00000491421 WBP1LQ9NX94 342 aa10.46□□□□□ -0.73
LSM2-213ENST00000491421 GGA3Q9NZ52 723 aa10.46□□□□□ -0.73
LSM2-213ENST00000491421 ADM5C9JUS6 153 aa10.45□□□□□ -0.74
LSM2-213ENST00000491421 KLRK1P26718 216 aa10.45□□□□□ -0.74
LSM2-213ENST00000491421 CTCFP49711 727 aaPredicted RBP10.45□□□□□ -0.74
LSM2-213ENST00000491421 SLFN5Q08AF3 891 aa10.45□□□□□ -0.74
LSM2-213ENST00000491421 SCARF1Q14162 830 aa10.45□□□□□ -0.74
LSM2-213ENST00000491421 CCDC57Q2TAC2 916 aa10.45□□□□□ -0.74
LSM2-213ENST00000491421 TAF7LQ5H9L4 462 aa10.45□□□□□ -0.74
LSM2-213ENST00000491421 EPHA10Q5JZY3 1008 aa10.45□□□□□ -0.74
LSM2-213ENST00000491421 DACT2Q5SW24 774 aa10.45□□□□□ -0.74
LSM2-213ENST00000491421 DLK2Q6UY11 383 aa10.45□□□□□ -0.74
LSM2-213ENST00000491421 SULF1Q8IWU6 871 aa10.45□□□□□ -0.74
LSM2-213ENST00000491421 MRPL50Q8N5N7 158 aaKnown RBP10.45□□□□□ -0.74
LSM2-213ENST00000491421 MYOZ2Q9NPC6 264 aa10.45□□□□□ -0.74
LSM2-213ENST00000491421 ASTN2O75129 1339 aaPredicted RBP10.44□□□□□ -0.74
LSM2-213ENST00000491421 PTPRCP08575 1304 aa10.44□□□□□ -0.74
LSM2-213ENST00000491421 MYO3BQ8WXR4 1341 aa10.44□□□□□ -0.74
LSM2-213ENST00000491421 CCER2I3L3R5 266 aa10.44□□□□□ -0.74
LSM2-213ENST00000491421 STRIP1Q5VSL9 837 aa10.44□□□□□ -0.74
LSM2-213ENST00000491421 ANGEL2Q5VTE6 544 aaKnown RBP10.44□□□□□ -0.74
LSM2-213ENST00000491421 OGFOD1Q8N543 542 aa10.44□□□□□ -0.74
LSM2-213ENST00000491421 HELBQ8NG08 1087 aaPredicted RBP10.44□□□□□ -0.74
LSM2-213ENST00000491421 SSH1Q8WYL5 1049 aa10.44□□□□□ -0.74
LSM2-213ENST00000491421 HHIPL1Q96JK4 782 aa10.44□□□□□ -0.74
LSM2-213ENST00000491421 MXD3Q9BW11 206 aa10.44□□□□□ -0.74
LSM2-213ENST00000491421 SCN9AQ15858 1988 aa10.44□□□□□ -0.74
LSM2-213ENST00000491421 MYH3P11055 1940 aa10.43□□□□□ -0.74
LSM2-213ENST00000491421 SNAP23O00161 211 aa10.43□□□□□ -0.74
LSM2-213ENST00000491421 AOC2O75106 756 aa10.43□□□□□ -0.74
LSM2-213ENST00000491421 TAF5LO75529 589 aa10.43□□□□□ -0.74
LSM2-213ENST00000491421 NBPF7P0C2Y1 421 aaPredicted RBP10.43□□□□□ -0.74
LSM2-213ENST00000491421 HUNKP57058 714 aa10.43□□□□□ -0.74
LSM2-213ENST00000491421 LDHAL6AQ6ZMR3 332 aa10.43□□□□□ -0.74
LSM2-213ENST00000491421 C2orf69Q8N8R5 385 aa10.43□□□□□ -0.74
LSM2-213ENST00000491421 CDCA7LQ96GN5 454 aa10.43□□□□□ -0.74
LSM2-213ENST00000491421 SUCLG2Q96I99 432 aa10.43□□□□□ -0.74
LSM2-213ENST00000491421 ZNF594Q96JF6 807 aaPredicted RBP10.43□□□□□ -0.74
LSM2-213ENST00000491421 BEGAINQ9BUH8 593 aa10.43□□□□□ -0.74
LSM2-213ENST00000491421 GBA2Q9HCG7 927 aaPredicted RBP10.43□□□□□ -0.74
LSM2-213ENST00000491421 PRDM10Q9NQV6 1147 aa10.43□□□□□ -0.74
LSM2-213ENST00000491421 CNNM1Q9NRU3 951 aa10.43□□□□□ -0.74
LSM2-213ENST00000491421 SPEF2Q9C093 1822 aa10.42□□□□□ -0.74
LSM2-213ENST00000491421 UTYO14607 1347 aa10.42□□□□□ -0.74
LSM2-213ENST00000491421 MAP2K2P36507 400 aa10.42□□□□□ -0.74
LSM2-213ENST00000491421 LBX1P52954 281 aa10.42□□□□□ -0.74
LSM2-213ENST00000491421 GTF2IP78347 998 aa10.42□□□□□ -0.74
LSM2-213ENST00000491421 TTLL5Q6EMB2 1281 aa10.42□□□□□ -0.74
LSM2-213ENST00000491421 C15orf52Q6ZUT6 534 aaKnown RBP10.42□□□□□ -0.74
LSM2-213ENST00000491421 ZNF804AQ7Z570 1209 aa10.42□□□□□ -0.74
LSM2-213ENST00000491421 CDCA5Q96FF9 252 aa10.42□□□□□ -0.74
LSM2-213ENST00000491421 CD209Q9NNX6 404 aa10.42□□□□□ -0.74
LSM2-213ENST00000491421 SMC4Q9NTJ3 1288 aa10.42□□□□□ -0.74
LSM2-213ENST00000491421 CACNA1FO60840 1977 aa10.42□□□□□ -0.74
LSM2-213ENST00000491421 THSD7BQ9C0I4 1608 aa10.41□□□□□ -0.74
LSM2-213ENST00000491421 PITPNM2Q9BZ72 1349 aa10.41□□□□□ -0.74
LSM2-213ENST00000491421 IRS2Q9Y4H2 1338 aa10.41□□□□□ -0.74
LSM2-213ENST00000491421 TRPM7Q96QT4 1865 aa10.41□□□□□ -0.74
LSM2-213ENST00000491421 PLIN1O60240 522 aa10.41□□□□□ -0.74
LSM2-213ENST00000491421 HSPA8P11142 646 aaKnown RBP10.41□□□□□ -0.74
LSM2-213ENST00000491421 MMP14P50281 582 aa10.41□□□□□ -0.74
LSM2-213ENST00000491421 NOGQ13253 232 aa10.41□□□□□ -0.74
LSM2-213ENST00000491421 NBPF9Q3BBW0 867 aa10.41□□□□□ -0.74
LSM2-213ENST00000491421 ALDH1L2Q3SY69 923 aa10.41□□□□□ -0.74
LSM2-213ENST00000491421 KIAA0825Q8IV33 1275 aa10.41□□□□□ -0.74
LSM2-213ENST00000491421 KAZALD1Q96I82 304 aa10.41□□□□□ -0.74
LSM2-213ENST00000491421 BICC1Q9H694 974 aaKnown RBP10.41□□□□□ -0.74
LSM2-213ENST00000491421 CAPN15O75808 1086 aa10.4□□□□□ -0.74
LSM2-213ENST00000491421 BRPF1P55201 1214 aaPredicted RBP10.4□□□□□ -0.74
LSM2-213ENST00000491421 RABL6Q3YEC7 729 aaPredicted RBP10.4□□□□□ -0.74
LSM2-213ENST00000491421 RGMBQ6NW40 437 aa10.4□□□□□ -0.74
LSM2-213ENST00000491421 TRMT2AQ8IZ69 625 aaKnown RBP10.4□□□□□ -0.74
LSM2-213ENST00000491421 HDAC9Q9UKV0 1011 aa10.4□□□□□ -0.74
LSM2-213ENST00000491421 WNT10BO00744 389 aa10.39□□□□□ -0.75
LSM2-213ENST00000491421 CA12O43570 354 aa10.39□□□□□ -0.75
LSM2-213ENST00000491421 SASH1O94885 1247 aa10.39□□□□□ -0.75
LSM2-213ENST00000491421 CT47B1P0C2W7 299 aaPredicted RBP10.39□□□□□ -0.75
LSM2-213ENST00000491421 IL1R1P14778 569 aa10.39□□□□□ -0.75
LSM2-213ENST00000491421 ZNF157P51786 506 aaPredicted RBP10.39□□□□□ -0.75
LSM2-213ENST00000491421 ANKRD44Q8N8A2 993 aa10.39□□□□□ -0.75
LSM2-213ENST00000491421 PUS3Q9BZE2 481 aaKnown RBP10.39□□□□□ -0.75
LSM2-213ENST00000491421 SCAF8Q9UPN6 1271 aaKnown RBP10.39□□□□□ -0.75
LSM2-213ENST00000491421 MROH5Q6ZUA9 1318 aa10.38□□□□□ -0.75
LSM2-213ENST00000491421 PSME4Q14997 1843 aa10.38□□□□□ -0.75
LSM2-213ENST00000491421 FKBP1BP68106 108 aa10.38□□□□□ -0.75
LSM2-213ENST00000491421 UBE4AQ14139 1066 aa10.38□□□□□ -0.75
LSM2-213ENST00000491421 CERS5Q8N5B7 392 aa10.38□□□□□ -0.75
LSM2-213ENST00000491421 CCDC102AQ96A19 550 aa10.38□□□□□ -0.75
LSM2-213ENST00000491421 USP44Q9H0E7 712 aa10.38□□□□□ -0.75
LSM2-213ENST00000491421 TSKSQ9UJT2 592 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms