RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 ZNF280AP59817 542 aaPredicted RBP25.1■■□□□ 1.61
SREBF1-216ENST00000490796 NOGQ13253 232 aa25.1■■□□□ 1.61
SREBF1-216ENST00000490796 SCARF1Q14162 830 aa25.1■■□□□ 1.61
SREBF1-216ENST00000490796 THSD7BQ9C0I4 1608 aa25.09■■□□□ 1.61
SREBF1-216ENST00000490796 FAM161AQ3B820 660 aa25.09■■□□□ 1.61
SREBF1-216ENST00000490796 MYOZ2Q9NPC6 264 aa25.09■■□□□ 1.61
SREBF1-216ENST00000490796 CACNA1FO60840 1977 aa25.08■■□□□ 1.61
SREBF1-216ENST00000490796 POLR2AP24928 1970 aaKnown RBP25.08■■□□□ 1.61
SREBF1-216ENST00000490796 BRPF1P55201 1214 aaPredicted RBP25.08■■□□□ 1.61
SREBF1-216ENST00000490796 ANGEL2Q5VTE6 544 aaKnown RBP25.08■■□□□ 1.61
SREBF1-216ENST00000490796 OGFOD1Q8N543 542 aa25.08■■□□□ 1.61
SREBF1-216ENST00000490796 COA1Q9GZY4 146 aa25.08■■□□□ 1.61
SREBF1-216ENST00000490796 ZNF609O15014 1411 aa25.07■■□□□ 1.6
SREBF1-216ENST00000490796 ANKRD18BA2A2Z9 1011 aa25.07■■□□□ 1.6
SREBF1-216ENST00000490796 WTIPA6NIX2 430 aaPredicted RBP25.07■■□□□ 1.6
SREBF1-216ENST00000490796 RGMBQ6NW40 437 aa25.07■■□□□ 1.6
SREBF1-216ENST00000490796 TSKSQ9UJT2 592 aa25.07■■□□□ 1.6
SREBF1-216ENST00000490796 CHMP3Q9Y3E7 222 aa25.07■■□□□ 1.6
SREBF1-216ENST00000490796 ZNF804BA4D1E1 1349 aa25.07■■□□□ 1.6
SREBF1-216ENST00000490796 CSF1RP07333 972 aa25.06■■□□□ 1.6
SREBF1-216ENST00000490796 CCDC102AQ96A19 550 aa25.06■■□□□ 1.6
SREBF1-216ENST00000490796 GMLQ99445 158 aa25.06■■□□□ 1.6
SREBF1-216ENST00000490796 SPEF2Q9C093 1822 aa25.06■■□□□ 1.6
SREBF1-216ENST00000490796 ASTN2O75129 1339 aaPredicted RBP25.06■■□□□ 1.6
SREBF1-216ENST00000490796 F6X3S4 739 aa25.05■■□□□ 1.6
SREBF1-216ENST00000490796 ZNF157P51786 506 aaPredicted RBP25.05■■□□□ 1.6
SREBF1-216ENST00000490796 CASP7P55210 303 aa25.05■■□□□ 1.6
SREBF1-216ENST00000490796 CDCA5Q96FF9 252 aa25.05■■□□□ 1.6
SREBF1-216ENST00000490796 MYO3BQ8WXR4 1341 aa25.05■■□□□ 1.6
SREBF1-216ENST00000490796 IFIT5Q13325 482 aaKnown RBP25.04■■□□□ 1.6
SREBF1-216ENST00000490796 STRIP1Q5VSL9 837 aa25.04■■□□□ 1.6
SREBF1-216ENST00000490796 CHRNDQ07001 517 aa25.02■■□□□ 1.6
SREBF1-216ENST00000490796 TAF7LQ5H9L4 462 aa25.02■■□□□ 1.6
SREBF1-216ENST00000490796 DACT2Q5SW24 774 aa25.02■■□□□ 1.6
SREBF1-216ENST00000490796 BEND3Q5T5X7 828 aa25.02■■□□□ 1.6
SREBF1-216ENST00000490796 TTLL5Q6EMB2 1281 aa25.02■■□□□ 1.6
SREBF1-216ENST00000490796 SPINK5Q9NQ38 1064 aaPredicted RBP25.02■■□□□ 1.6
SREBF1-216ENST00000490796 PITPNM2Q9BZ72 1349 aa25.02■■□□□ 1.6
SREBF1-216ENST00000490796 PSME4Q14997 1843 aa25.01■■□□□ 1.59
SREBF1-216ENST00000490796 TXNRD3Q86VQ6 643 aa25.01■■□□□ 1.59
SREBF1-216ENST00000490796 MXD3Q9BW11 206 aa25.01■■□□□ 1.59
SREBF1-216ENST00000490796 C9orf78Q9NZ63 289 aaPredicted RBP25.01■■□□□ 1.59
SREBF1-216ENST00000490796 HDAC9Q9UKV0 1011 aa25.01■■□□□ 1.59
SREBF1-216ENST00000490796 MMP14P50281 582 aa25■■□□□ 1.59
SREBF1-216ENST00000490796 SLC4A10Q6U841 1118 aa25■■□□□ 1.59
SREBF1-216ENST00000490796 ABHD8Q96I13 439 aa25■■□□□ 1.59
SREBF1-216ENST00000490796 CCDC57Q2TAC2 916 aa24.99■■□□□ 1.59
SREBF1-216ENST00000490796 ZIC5Q96T25 663 aa24.99■■□□□ 1.59
SREBF1-216ENST00000490796 GRM8O00222 908 aa24.98■■□□□ 1.59
SREBF1-216ENST00000490796 KLRK1P26718 216 aa24.98■■□□□ 1.59
SREBF1-216ENST00000490796 FKBP1BP68106 108 aa24.98■■□□□ 1.59
SREBF1-216ENST00000490796 GTF2IP78347 998 aa24.98■■□□□ 1.59
SREBF1-216ENST00000490796 FOXO4P98177 505 aa24.98■■□□□ 1.59
SREBF1-216ENST00000490796 KIF23Q02241 960 aaPredicted RBP24.98■■□□□ 1.59
SREBF1-216ENST00000490796 NBPF9Q3BBW0 867 aa24.98■■□□□ 1.59
SREBF1-216ENST00000490796 LMBR1LQ6UX01 489 aa24.98■■□□□ 1.59
SREBF1-216ENST00000490796 TAF5LO75529 589 aa24.97■■□□□ 1.59
SREBF1-216ENST00000490796 TTLL12Q14166 644 aaPredicted RBP24.97■■□□□ 1.59
SREBF1-216ENST00000490796 HELBQ8NG08 1087 aaPredicted RBP24.97■■□□□ 1.59
SREBF1-216ENST00000490796 FAM155AB1AL88 458 aaPredicted RBP24.96■■□□□ 1.59
SREBF1-216ENST00000490796 NF2P35240 595 aa24.96■■□□□ 1.59
SREBF1-216ENST00000490796 KIAA0825Q8IV33 1275 aa24.96■■□□□ 1.59
SREBF1-216ENST00000490796 SRCIN1Q9C0H9 1055 aa24.96■■□□□ 1.59
SREBF1-216ENST00000490796 CNNM1Q9NRU3 951 aa24.96■■□□□ 1.59
SREBF1-216ENST00000490796 WNT10BO00744 389 aa24.95■■□□□ 1.58
SREBF1-216ENST00000490796 ALDH1L1O75891 902 aa24.95■■□□□ 1.58
SREBF1-216ENST00000490796 SLC10A3P09131 477 aa24.95■■□□□ 1.58
SREBF1-216ENST00000490796 LDHAL6AQ6ZMR3 332 aa24.95■■□□□ 1.58
SREBF1-216ENST00000490796 ZNF804AQ7Z570 1209 aa24.95■■□□□ 1.58
SREBF1-216ENST00000490796 CD209Q9NNX6 404 aa24.95■■□□□ 1.58
SREBF1-216ENST00000490796 SCAF8Q9UPN6 1271 aaKnown RBP24.95■■□□□ 1.58
SREBF1-216ENST00000490796 PLIN1O60240 522 aa24.94■■□□□ 1.58
SREBF1-216ENST00000490796 SASH1O94885 1247 aa24.94■■□□□ 1.58
SREBF1-216ENST00000490796 CCDC85CA6NKD9 419 aa24.92■■□□□ 1.58
SREBF1-216ENST00000490796 SNAP23O00161 211 aa24.92■■□□□ 1.58
SREBF1-216ENST00000490796 PRAMEF18Q5VWM3 479 aa24.92■■□□□ 1.58
SREBF1-216ENST00000490796 APOBEC3FQ8IUX4 373 aaKnown RBP24.92■■□□□ 1.58
SREBF1-216ENST00000490796 REM2Q8IYK8 340 aaPredicted RBP24.92■■□□□ 1.58
SREBF1-216ENST00000490796 SAGE1Q9NXZ1 904 aa24.92■■□□□ 1.58
SREBF1-216ENST00000490796 EPHA10Q5JZY3 1008 aa24.91■■□□□ 1.58
SREBF1-216ENST00000490796 C15orf52Q6ZUT6 534 aaKnown RBP24.91■■□□□ 1.58
SREBF1-216ENST00000490796 ZNF594Q96JF6 807 aaPredicted RBP24.91■■□□□ 1.58
SREBF1-216ENST00000490796 CASP8AP2Q9UKL3 1982 aa24.91■■□□□ 1.58
SREBF1-216ENST00000490796 UBE2Q2LH0YL09 131 aa24.9■■□□□ 1.58
SREBF1-216ENST00000490796 TRPA1O75762 1119 aa24.9■■□□□ 1.58
SREBF1-216ENST00000490796 DLGAP5Q15398 846 aa24.9■■□□□ 1.58
SREBF1-216ENST00000490796 RASAL3Q86YV0 1011 aa24.9■■□□□ 1.58
SREBF1-216ENST00000490796 PAPPA2Q9BXP8 1791 aa24.9■■□□□ 1.58
SREBF1-216ENST00000490796 DGKZQ13574 1117 aa24.89■■□□□ 1.58
SREBF1-216ENST00000490796 CSRNP1Q96S65 589 aa24.89■■□□□ 1.58
SREBF1-216ENST00000490796 MCOLN1Q9GZU1 580 aa24.89■■□□□ 1.58
SREBF1-216ENST00000490796 RNF186Q9NXI6 227 aa24.89■■□□□ 1.58
SREBF1-216ENST00000490796 MOB2Q70IA6 237 aa24.88■■□□□ 1.57
SREBF1-216ENST00000490796 F8W031 263 aaPredicted RBP24.87■■□□□ 1.57
SREBF1-216ENST00000490796 ARMC9Q7Z3E5 817 aa24.87■■□□□ 1.57
SREBF1-216ENST00000490796 E9PSI1 815 aa24.86■■□□□ 1.57
SREBF1-216ENST00000490796 MYO1BO43795 1136 aa24.86■■□□□ 1.57
SREBF1-216ENST00000490796 IL1R1P14778 569 aa24.86■■□□□ 1.57
SREBF1-216ENST00000490796 SUCLG2Q96I99 432 aa24.86■■□□□ 1.57
SREBF1-216ENST00000490796 ZNF521Q96K83 1311 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms