RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 PDS5AQ29RF7 1337 aaKnown RBP11.6□□□□□ -0.55
SUPT20H-220ENST00000490716 EPS15P42566 896 aa11.6□□□□□ -0.55
SUPT20H-220ENST00000490716 MMP14P50281 582 aa11.6□□□□□ -0.55
SUPT20H-220ENST00000490716 USP50Q70EL3 339 aaPredicted RBP11.6□□□□□ -0.55
SUPT20H-220ENST00000490716 SNAP23O00161 211 aa11.6□□□□□ -0.55
SUPT20H-220ENST00000490716 COA1Q9GZY4 146 aa11.6□□□□□ -0.55
SUPT20H-220ENST00000490716 PTPRFP10586 1907 aa11.6□□□□□ -0.55
SUPT20H-220ENST00000490716 UBE4AQ14139 1066 aa11.6□□□□□ -0.55
SUPT20H-220ENST00000490716 LDHDQ86WU2 507 aa11.6□□□□□ -0.55
SUPT20H-220ENST00000490716 AGBL3Q8NEM8 1001 aa11.6□□□□□ -0.55
SUPT20H-220ENST00000490716 FAM84BQ96KN1 310 aaPredicted RBP11.6□□□□□ -0.55
SUPT20H-220ENST00000490716 ZBTB40Q9NUA8 1239 aa11.6□□□□□ -0.55
SUPT20H-220ENST00000490716 HSPA6P17066 643 aa11.59□□□□□ -0.55
SUPT20H-220ENST00000490716 ATAD5Q96QE3 1844 aa11.59□□□□□ -0.55
SUPT20H-220ENST00000490716 PNMA6EA0A0J9YXQ4 647 aa11.59□□□□□ -0.55
SUPT20H-220ENST00000490716 IFIT5Q13325 482 aaKnown RBP11.59□□□□□ -0.55
SUPT20H-220ENST00000490716 PDE8BO95263 885 aa11.59□□□□□ -0.55
SUPT20H-220ENST00000490716 STRIP1Q5VSL9 837 aa11.59□□□□□ -0.55
SUPT20H-220ENST00000490716 RSBN1LQ6PCB5 846 aaPredicted RBP11.59□□□□□ -0.55
SUPT20H-220ENST00000490716 LARGE2Q8N3Y3 721 aa11.59□□□□□ -0.55
SUPT20H-220ENST00000490716 JMYQ8N9B5 988 aa11.59□□□□□ -0.55
SUPT20H-220ENST00000490716 CCDC85AQ96PX6 553 aaPredicted RBP11.59□□□□□ -0.55
SUPT20H-220ENST00000490716 NSFL1CQ9UNZ2 370 aaKnown RBP11.59□□□□□ -0.55
SUPT20H-220ENST00000490716 LRRFIP2Q9Y608 721 aaKnown RBP11.59□□□□□ -0.55
SUPT20H-220ENST00000490716 UFL1O94874 794 aa11.58□□□□□ -0.56
SUPT20H-220ENST00000490716 EPHX2P34913 555 aa11.58□□□□□ -0.56
SUPT20H-220ENST00000490716 GMPSP49915 693 aaPredicted RBP11.58□□□□□ -0.56
SUPT20H-220ENST00000490716 ZKSCAN2Q63HK3 967 aa11.58□□□□□ -0.56
SUPT20H-220ENST00000490716 NIM1KQ8IY84 436 aa11.58□□□□□ -0.56
SUPT20H-220ENST00000490716 KLHDC4Q8TBB5 520 aa11.58□□□□□ -0.56
SUPT20H-220ENST00000490716 TRPM4Q8TD43 1214 aa11.58□□□□□ -0.56
SUPT20H-220ENST00000490716 HACL1Q9UJ83 578 aa11.58□□□□□ -0.56
SUPT20H-220ENST00000490716 ZC3H15Q8WU90 426 aaKnown RBP11.58□□□□□ -0.56
SUPT20H-220ENST00000490716 EYA3Q99504 573 aa11.58□□□□□ -0.56
SUPT20H-220ENST00000490716 CD209Q9NNX6 404 aa11.58□□□□□ -0.56
SUPT20H-220ENST00000490716 SALL1Q9NSC2 1324 aa11.58□□□□□ -0.56
SUPT20H-220ENST00000490716 NPHP1O15259 732 aa11.58□□□□□ -0.56
SUPT20H-220ENST00000490716 DBNDD1Q9H9R9 158 aa11.58□□□□□ -0.56
SUPT20H-220ENST00000490716 HTTP42858 3142 aa11.58□□□□□ -0.56
SUPT20H-220ENST00000490716 EYA2O00167 538 aa11.57□□□□□ -0.56
SUPT20H-220ENST00000490716 CIAPIN1Q6FI81 312 aa11.57□□□□□ -0.56
SUPT20H-220ENST00000490716 SLC4A10Q6U841 1118 aa11.57□□□□□ -0.56
SUPT20H-220ENST00000490716 SMC1BQ8NDV3 1235 aa11.57□□□□□ -0.56
SUPT20H-220ENST00000490716 ADARB2Q9NS39 739 aaKnown RBP11.57□□□□□ -0.56
SUPT20H-220ENST00000490716 IQCA1LA6NCM1 817 aa11.57□□□□□ -0.56
SUPT20H-220ENST00000490716 CST9Q5W186 159 aa11.57□□□□□ -0.56
SUPT20H-220ENST00000490716 DPY19L2Q6NUT2 758 aa11.57□□□□□ -0.56
SUPT20H-220ENST00000490716 C9orf78Q9NZ63 289 aaPredicted RBP11.57□□□□□ -0.56
SUPT20H-220ENST00000490716 AOX1Q06278 1338 aa11.57□□□□□ -0.56
SUPT20H-220ENST00000490716 PITPNM2Q9BZ72 1349 aa11.57□□□□□ -0.56
SUPT20H-220ENST00000490716 SASH1O94885 1247 aa11.57□□□□□ -0.56
SUPT20H-220ENST00000490716 TAF5LO75529 589 aa11.56□□□□□ -0.56
SUPT20H-220ENST00000490716 IGHMBP2P38935 993 aaKnown RBP11.56□□□□□ -0.56
SUPT20H-220ENST00000490716 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
SUPT20H-220ENST00000490716 ATP8B2P98198 1209 aa11.56□□□□□ -0.56
SUPT20H-220ENST00000490716 C20orf194Q5TEA3 1177 aa11.56□□□□□ -0.56
SUPT20H-220ENST00000490716 MRIQ9BWK5 157 aa11.56□□□□□ -0.56
SUPT20H-220ENST00000490716 GREB1LQ9C091 1923 aaPredicted RBP11.56□□□□□ -0.56
SUPT20H-220ENST00000490716 TNIP1Q15025 636 aa11.56□□□□□ -0.56
SUPT20H-220ENST00000490716 IPO8O15397 1037 aaKnown RBP11.55□□□□□ -0.56
SUPT20H-220ENST00000490716 PDE3AQ14432 1141 aa11.55□□□□□ -0.56
SUPT20H-220ENST00000490716 DOK7Q18PE1 504 aa11.55□□□□□ -0.56
SUPT20H-220ENST00000490716 CEP85Q6P2H3 762 aa11.55□□□□□ -0.56
SUPT20H-220ENST00000490716 PNMA8AQ86V59 439 aaPredicted RBP11.55□□□□□ -0.56
SUPT20H-220ENST00000490716 GRIK5Q16478 980 aa11.55□□□□□ -0.56
SUPT20H-220ENST00000490716 DZIP1LQ8IYY4 767 aaKnown RBP11.55□□□□□ -0.56
SUPT20H-220ENST00000490716 ZNF384Q8TF68 577 aa11.55□□□□□ -0.56
SUPT20H-220ENST00000490716 ZBTB12Q9Y330 459 aaPredicted RBP11.55□□□□□ -0.56
SUPT20H-220ENST00000490716 LOC285556D6RIA3 1793 aa11.55□□□□□ -0.56
SUPT20H-220ENST00000490716 ZNF526Q8TF50 670 aaPredicted RBP11.55□□□□□ -0.56
SUPT20H-220ENST00000490716 JDP2Q8WYK2 163 aa11.55□□□□□ -0.56
SUPT20H-220ENST00000490716 USP17L3A6NCW0 530 aa11.54□□□□□ -0.56
SUPT20H-220ENST00000490716 USP17L4A6NCW7 530 aa11.54□□□□□ -0.56
SUPT20H-220ENST00000490716 RAD17O75943 681 aa11.54□□□□□ -0.56
SUPT20H-220ENST00000490716 GNAI3P08754 354 aa11.54□□□□□ -0.56
SUPT20H-220ENST00000490716 EIF6P56537 245 aaKnown RBP11.54□□□□□ -0.56
SUPT20H-220ENST00000490716 MVPQ14764 893 aaKnown RBP11.54□□□□□ -0.56
SUPT20H-220ENST00000490716 USP17L1Q7RTZ2 530 aa11.54□□□□□ -0.56
SUPT20H-220ENST00000490716 ZNF512BQ96KM6 892 aaPredicted RBP11.54□□□□□ -0.56
SUPT20H-220ENST00000490716 CCDC57Q2TAC2 916 aa11.54□□□□□ -0.56
SUPT20H-220ENST00000490716 LDHAL6AQ6ZMR3 332 aa11.54□□□□□ -0.56
SUPT20H-220ENST00000490716 GPR108Q9NPR9 543 aa11.54□□□□□ -0.56
SUPT20H-220ENST00000490716 ASTN2O75129 1339 aaPredicted RBP11.54□□□□□ -0.56
SUPT20H-220ENST00000490716 DOCK1Q14185 1865 aa11.54□□□□□ -0.56
SUPT20H-220ENST00000490716 UBTFL1P0CB47 393 aaPredicted RBP11.54□□□□□ -0.56
SUPT20H-220ENST00000490716 APLP1P51693 650 aa11.54□□□□□ -0.56
SUPT20H-220ENST00000490716 MXD3Q9BW11 206 aa11.54□□□□□ -0.56
SUPT20H-220ENST00000490716 CNTNAP1P78357 1384 aa11.54□□□□□ -0.56
SUPT20H-220ENST00000490716 MYO3BQ8WXR4 1341 aa11.53□□□□□ -0.56
SUPT20H-220ENST00000490716 CNOT7Q9UIV1 285 aaKnown RBP11.53□□□□□ -0.56
SUPT20H-220ENST00000490716 RCAN3Q9UKA8 241 aa11.53□□□□□ -0.56
SUPT20H-220ENST00000490716 ATRNL1Q5VV63 1379 aa11.53□□□□□ -0.56
SUPT20H-220ENST00000490716 COL2A1P02458 1487 aaPredicted RBP11.53□□□□□ -0.56
SUPT20H-220ENST00000490716 HHIPL1Q96JK4 782 aa11.53□□□□□ -0.56
SUPT20H-220ENST00000490716 ANKIB1Q9P2G1 1089 aa11.53□□□□□ -0.56
SUPT20H-220ENST00000490716 PARP14Q460N5 1801 aa11.53□□□□□ -0.56
SUPT20H-220ENST00000490716 RASSF10A6NK89 507 aa11.53□□□□□ -0.56
SUPT20H-220ENST00000490716 RIMBP2O15034 1052 aa11.53□□□□□ -0.56
SUPT20H-220ENST00000490716 CREBZFQ9NS37 354 aa11.53□□□□□ -0.56
SUPT20H-220ENST00000490716 ARID4AP29374 1257 aaPredicted RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms