RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 C21orf2O43822 256 aa13.43□□□□□ -0.26
VARS2-210ENST00000490699 UFL1O94874 794 aa13.43□□□□□ -0.26
VARS2-210ENST00000490699 UBE4AQ14139 1066 aa13.43□□□□□ -0.26
VARS2-210ENST00000490699 TNNI3KQ59H18 835 aa13.43□□□□□ -0.26
VARS2-210ENST00000490699 CAVIN4Q5BKX8 364 aa13.43□□□□□ -0.26
VARS2-210ENST00000490699 PELP1Q8IZL8 1130 aaKnown RBP13.43□□□□□ -0.26
VARS2-210ENST00000490699 HELBQ8NG08 1087 aaPredicted RBP13.43□□□□□ -0.26
VARS2-210ENST00000490699 LNPKQ9C0E8 428 aa13.43□□□□□ -0.26
VARS2-210ENST00000490699 KIAA1551Q9HCM1 1747 aa13.43□□□□□ -0.26
VARS2-210ENST00000490699 GNL3LQ9NVN8 582 aaKnown RBP13.43□□□□□ -0.26
VARS2-210ENST00000490699 FPGT-TNNI3KV9GXZ4 949 aa13.43□□□□□ -0.26
VARS2-210ENST00000490699 ZNF804BA4D1E1 1349 aa13.42□□□□□ -0.26
VARS2-210ENST00000490699 SLX4Q8IY92 1834 aa13.42□□□□□ -0.26
VARS2-210ENST00000490699 TAF5LO75529 589 aa13.42□□□□□ -0.26
VARS2-210ENST00000490699 SASH1O94885 1247 aa13.42□□□□□ -0.26
VARS2-210ENST00000490699 CCDC158Q5M9N0 1113 aa13.42□□□□□ -0.26
VARS2-210ENST00000490699 NLGN2Q8NFZ4 835 aa13.42□□□□□ -0.26
VARS2-210ENST00000490699 PODXL2Q9NZ53 605 aa13.42□□□□□ -0.26
VARS2-210ENST00000490699 ZNF609O15014 1411 aa13.41□□□□□ -0.26
VARS2-210ENST00000490699 A0A1B0GUL7 405 aa13.41□□□□□ -0.26
VARS2-210ENST00000490699 ERC2O15083 957 aa13.41□□□□□ -0.26
VARS2-210ENST00000490699 SMARCA5O60264 1052 aaPredicted RBP13.41□□□□□ -0.26
VARS2-210ENST00000490699 KCNA3P22001 575 aa13.41□□□□□ -0.26
VARS2-210ENST00000490699 GPSM2P81274 684 aa13.41□□□□□ -0.26
VARS2-210ENST00000490699 ZNF804AQ7Z570 1209 aa13.41□□□□□ -0.26
VARS2-210ENST00000490699 BRCA1P38398 1863 aaKnown RBP13.41□□□□□ -0.26
VARS2-210ENST00000490699 FRAT2O75474 233 aaPredicted RBP13.4□□□□□ -0.26
VARS2-210ENST00000490699 TTC39AQ5SRH9 613 aa13.4□□□□□ -0.26
VARS2-210ENST00000490699 VGLL2Q8N8G2 317 aa13.4□□□□□ -0.26
VARS2-210ENST00000490699 ZC3H12CQ9C0D7 883 aaKnown RBP13.4□□□□□ -0.26
VARS2-210ENST00000490699 WWC3Q9ULE0 1092 aa13.4□□□□□ -0.26
VARS2-210ENST00000490699 A0A1B0GUL6 1792 aa13.4□□□□□ -0.26
VARS2-210ENST00000490699 ARFGEF1Q9Y6D6 1849 aa13.39□□□□□ -0.27
VARS2-210ENST00000490699 MX1P20591 662 aa13.39□□□□□ -0.27
VARS2-210ENST00000490699 WASHC4Q2M389 1173 aa13.39□□□□□ -0.27
VARS2-210ENST00000490699 TBC1D16Q8TBP0 767 aa13.39□□□□□ -0.27
VARS2-210ENST00000490699 TAOK3Q9H2K8 898 aa13.39□□□□□ -0.27
VARS2-210ENST00000490699 TTC41PQ6P2S7 1318 aa13.39□□□□□ -0.27
VARS2-210ENST00000490699 MED23Q9ULK4 1368 aa13.38□□□□□ -0.27
VARS2-210ENST00000490699 UQCRFS1P1P0C7P4 283 aa13.38□□□□□ -0.27
VARS2-210ENST00000490699 TIMM10P62072 90 aa13.38□□□□□ -0.27
VARS2-210ENST00000490699 FKBP4Q02790 459 aaKnown RBP eCLIP13.38□□□□□ -0.27
VARS2-210ENST00000490699 GPR162Q16538 588 aa13.38□□□□□ -0.27
VARS2-210ENST00000490699 EAF2Q96CJ1 260 aaPredicted RBP13.38□□□□□ -0.27
VARS2-210ENST00000490699 XAGE2Q96GT9 111 aa13.38□□□□□ -0.27
VARS2-210ENST00000490699 PSMD1Q99460 953 aa13.38□□□□□ -0.27
VARS2-210ENST00000490699 CCDC8Q9H0W5 538 aaPredicted RBP13.38□□□□□ -0.27
VARS2-210ENST00000490699 VPS33BQ9H267 617 aa13.38□□□□□ -0.27
VARS2-210ENST00000490699 ARAP2Q8WZ64 1704 aa13.38□□□□□ -0.27
VARS2-210ENST00000490699 COL4A1P02462 1669 aa13.37□□□□□ -0.27
VARS2-210ENST00000490699 FGFR2P21802 821 aa13.37□□□□□ -0.27
VARS2-210ENST00000490699 HIBADHP31937 336 aaKnown RBP13.37□□□□□ -0.27
VARS2-210ENST00000490699 C7orf43Q8WVR3 580 aa13.37□□□□□ -0.27
VARS2-210ENST00000490699 ECHDC1Q9NTX5 307 aa13.37□□□□□ -0.27
VARS2-210ENST00000490699 AOX1Q06278 1338 aa13.37□□□□□ -0.27
VARS2-210ENST00000490699 PPIP5K2O43314 1243 aa13.36□□□□□ -0.27
VARS2-210ENST00000490699 GRIN3BO60391 1043 aa13.36□□□□□ -0.27
VARS2-210ENST00000490699 GLRX3O76003 335 aaKnown RBP13.36□□□□□ -0.27
VARS2-210ENST00000490699 RGS3P49796 1198 aa13.36□□□□□ -0.27
VARS2-210ENST00000490699 ARHGAP27Q6ZUM4 889 aa13.36□□□□□ -0.27
VARS2-210ENST00000490699 C15orf52Q6ZUT6 534 aaKnown RBP13.36□□□□□ -0.27
VARS2-210ENST00000490699 DBNDD2Q9BQY9 259 aa13.36□□□□□ -0.27
VARS2-210ENST00000490699 RTFDC1Q9BY42 306 aaPredicted RBP13.36□□□□□ -0.27
VARS2-210ENST00000490699 RIMBP2O15034 1052 aa13.35□□□□□ -0.27
VARS2-210ENST00000490699 SEMA3EO15041 775 aa13.35□□□□□ -0.27
VARS2-210ENST00000490699 OLFM4Q6UX06 510 aa13.35□□□□□ -0.27
VARS2-210ENST00000490699 LARGE2Q8N3Y3 721 aa13.35□□□□□ -0.27
VARS2-210ENST00000490699 JDP2Q8WYK2 163 aa13.35□□□□□ -0.27
VARS2-210ENST00000490699 COA1Q9GZY4 146 aa13.35□□□□□ -0.27
VARS2-210ENST00000490699 POLLQ9UGP5 575 aa13.35□□□□□ -0.27
VARS2-210ENST00000490699 DBNLQ9UJU6 430 aaKnown RBP13.35□□□□□ -0.27
VARS2-210ENST00000490699 LTBP3Q9NS15 1303 aa13.35□□□□□ -0.27
VARS2-210ENST00000490699 LTBP1Q14766 1721 aa13.34□□□□□ -0.27
VARS2-210ENST00000490699 ADORA1P30542 326 aa13.34□□□□□ -0.27
VARS2-210ENST00000490699 PDE1AP54750 535 aa13.34□□□□□ -0.27
VARS2-210ENST00000490699 CCDC102BQ68D86 513 aa13.34□□□□□ -0.27
VARS2-210ENST00000490699 NIM1KQ8IY84 436 aa13.34□□□□□ -0.27
VARS2-210ENST00000490699 DENND2AQ9ULE3 1009 aa13.34□□□□□ -0.27
VARS2-210ENST00000490699 ATP5JP18859 108 aa13.33□□□□□ -0.28
VARS2-210ENST00000490699 IARSP41252 1262 aaKnown RBP13.33□□□□□ -0.28
VARS2-210ENST00000490699 GYG1P46976 350 aa13.33□□□□□ -0.28
VARS2-210ENST00000490699 KIAA2012Q0VF49 1180 aa13.33□□□□□ -0.28
VARS2-210ENST00000490699 LRRFIP1Q32MZ4 808 aaKnown RBP13.33□□□□□ -0.28
VARS2-210ENST00000490699 C16orf71Q8IYS4 520 aaPredicted RBP13.33□□□□□ -0.28
VARS2-210ENST00000490699 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.33□□□□□ -0.28
VARS2-210ENST00000490699 ZNF512BQ96KM6 892 aaPredicted RBP13.33□□□□□ -0.28
VARS2-210ENST00000490699 TLR7Q9NYK1 1049 aaKnown RBP13.33□□□□□ -0.28
VARS2-210ENST00000490699 STAP2Q9UGK3 403 aa13.33□□□□□ -0.28
VARS2-210ENST00000490699 FER1L6Q2WGJ9 1857 aa13.33□□□□□ -0.28
VARS2-210ENST00000490699 MYH13Q9UKX3 1938 aa13.33□□□□□ -0.28
VARS2-210ENST00000490699 DUOX1Q9NRD9 1551 aa13.32□□□□□ -0.28
VARS2-210ENST00000490699 TRIM6-TRIM34B2RNG4 842 aa13.32□□□□□ -0.28
VARS2-210ENST00000490699 SNAP23O00161 211 aa13.32□□□□□ -0.28
VARS2-210ENST00000490699 ARID4AP29374 1257 aaPredicted RBP13.32□□□□□ -0.28
VARS2-210ENST00000490699 PHKA1P46020 1223 aa13.32□□□□□ -0.28
VARS2-210ENST00000490699 BCAMP50895 628 aa13.32□□□□□ -0.28
VARS2-210ENST00000490699 TTF1Q15361 905 aaPredicted RBP13.32□□□□□ -0.28
VARS2-210ENST00000490699 AOC3Q16853 763 aa13.32□□□□□ -0.28
VARS2-210ENST00000490699 PODNQ7Z5L7 613 aa13.32□□□□□ -0.28
VARS2-210ENST00000490699 FBXO33Q7Z6M2 555 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms