RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 PLIN1O60240 522 aa19.24■□□□□ 0.67
VPS26A-207ENST00000490696 VIL1P09327 827 aaKnown RBP19.24■□□□□ 0.67
VPS26A-207ENST00000490696 PTPN12Q05209 780 aaKnown RBP19.24■□□□□ 0.67
VPS26A-207ENST00000490696 PNMA8AQ86V59 439 aaPredicted RBP19.24■□□□□ 0.67
VPS26A-207ENST00000490696 LDHDQ86WU2 507 aa19.24■□□□□ 0.67
VPS26A-207ENST00000490696 DPF2Q92785 391 aa19.24■□□□□ 0.67
VPS26A-207ENST00000490696 COA1Q9GZY4 146 aa19.24■□□□□ 0.67
VPS26A-207ENST00000490696 ZBTB12Q9Y330 459 aaPredicted RBP19.24■□□□□ 0.67
VPS26A-207ENST00000490696 ADAMTSL1Q8N6G6 1762 aa19.24■□□□□ 0.67
VPS26A-207ENST00000490696 EAPPQ56P03 285 aaPredicted RBP19.23■□□□□ 0.67
VPS26A-207ENST00000490696 CHADLQ6NUI6 762 aa19.23■□□□□ 0.67
VPS26A-207ENST00000490696 RPS12P25398 132 aaKnown RBP19.22■□□□□ 0.67
VPS26A-207ENST00000490696 MTX1Q13505 466 aa19.22■□□□□ 0.67
VPS26A-207ENST00000490696 UBE4AQ14139 1066 aa19.22■□□□□ 0.67
VPS26A-207ENST00000490696 VGLL2Q8N8G2 317 aa19.22■□□□□ 0.67
VPS26A-207ENST00000490696 ADARB2Q9NS39 739 aaKnown RBP19.22■□□□□ 0.67
VPS26A-207ENST00000490696 CNOT7Q9UIV1 285 aaKnown RBP19.22■□□□□ 0.67
VPS26A-207ENST00000490696 PSME4Q14997 1843 aa19.22■□□□□ 0.67
VPS26A-207ENST00000490696 ZNF609O15014 1411 aa19.22■□□□□ 0.67
VPS26A-207ENST00000490696 SHTN1A0MZ66 631 aa19.21■□□□□ 0.67
VPS26A-207ENST00000490696 USP17L3A6NCW0 530 aa19.21■□□□□ 0.67
VPS26A-207ENST00000490696 USP17L4A6NCW7 530 aa19.21■□□□□ 0.67
VPS26A-207ENST00000490696 EYA2O00167 538 aa19.21■□□□□ 0.67
VPS26A-207ENST00000490696 GNAI2P04899 355 aa19.21■□□□□ 0.67
VPS26A-207ENST00000490696 CACNB1Q02641 598 aaPredicted RBP19.21■□□□□ 0.67
VPS26A-207ENST00000490696 METTL24Q5JXM2 366 aa19.21■□□□□ 0.67
VPS26A-207ENST00000490696 USP50Q70EL3 339 aaPredicted RBP19.21■□□□□ 0.67
VPS26A-207ENST00000490696 USP17L1Q7RTZ2 530 aa19.21■□□□□ 0.67
VPS26A-207ENST00000490696 RSBN1LQ6PCB5 846 aaPredicted RBP19.2■□□□□ 0.66
VPS26A-207ENST00000490696 ATG9AQ7Z3C6 839 aa19.2■□□□□ 0.66
VPS26A-207ENST00000490696 ITPRIPQ8IWB1 547 aa19.2■□□□□ 0.66
VPS26A-207ENST00000490696 MICALL2Q8IY33 904 aa19.2■□□□□ 0.66
VPS26A-207ENST00000490696 PANK1Q8TE04 598 aa19.2■□□□□ 0.66
VPS26A-207ENST00000490696 CD209Q9NNX6 404 aa19.2■□□□□ 0.66
VPS26A-207ENST00000490696 FBXO3Q9UK99 471 aa19.2■□□□□ 0.66
VPS26A-207ENST00000490696 ZBTB7BO15156 539 aaPredicted RBP19.19■□□□□ 0.66
VPS26A-207ENST00000490696 CIAO1O76071 339 aa19.19■□□□□ 0.66
VPS26A-207ENST00000490696 PDE8BO95263 885 aa19.19■□□□□ 0.66
VPS26A-207ENST00000490696 AGBL3Q8NEM8 1001 aa19.19■□□□□ 0.66
VPS26A-207ENST00000490696 GMLQ99445 158 aa19.19■□□□□ 0.66
VPS26A-207ENST00000490696 COPRSQ9NQ92 184 aa19.19■□□□□ 0.66
VPS26A-207ENST00000490696 CLEC11AQ9Y240 323 aa19.19■□□□□ 0.66
VPS26A-207ENST00000490696 H7C1D1 291 aa19.18■□□□□ 0.66
VPS26A-207ENST00000490696 SRGAP3O43295 1099 aa19.18■□□□□ 0.66
VPS26A-207ENST00000490696 IL1R1P14778 569 aa19.18■□□□□ 0.66
VPS26A-207ENST00000490696 DACT2Q5SW24 774 aa19.18■□□□□ 0.66
VPS26A-207ENST00000490696 STRIP1Q5VSL9 837 aa19.18■□□□□ 0.66
VPS26A-207ENST00000490696 ZNF804AQ7Z570 1209 aa19.18■□□□□ 0.66
VPS26A-207ENST00000490696 TRPM4Q8TD43 1214 aa19.18■□□□□ 0.66
VPS26A-207ENST00000490696 YTHDC1Q96MU7 727 aaKnown RBP19.18■□□□□ 0.66
VPS26A-207ENST00000490696 SIL1Q9H173 461 aa19.18■□□□□ 0.66
VPS26A-207ENST00000490696 PA2G4Q9UQ80 394 aaKnown RBP19.18■□□□□ 0.66
VPS26A-207ENST00000490696 ZNF646O15015 1829 aaPredicted RBP19.18■□□□□ 0.66
VPS26A-207ENST00000490696 MS4A1P11836 297 aa19.17■□□□□ 0.66
VPS26A-207ENST00000490696 HIRAP54198 1017 aaPredicted RBP19.17■□□□□ 0.66
VPS26A-207ENST00000490696 MAP1SQ66K74 1059 aaPredicted RBP19.17■□□□□ 0.66
VPS26A-207ENST00000490696 ITGBL1O95965 494 aaPredicted RBP19.16■□□□□ 0.66
VPS26A-207ENST00000490696 FGFR2P21802 821 aa19.16■□□□□ 0.66
VPS26A-207ENST00000490696 TTLL5Q6EMB2 1281 aa19.16■□□□□ 0.66
VPS26A-207ENST00000490696 SAMD7Q7Z3H4 446 aa19.16■□□□□ 0.66
VPS26A-207ENST00000490696 DNAJC5GQ8N7S2 189 aa19.16■□□□□ 0.66
VPS26A-207ENST00000490696 FAM84BQ96KN1 310 aaPredicted RBP19.16■□□□□ 0.66
VPS26A-207ENST00000490696 MXD3Q9BW11 206 aa19.16■□□□□ 0.66
VPS26A-207ENST00000490696 PNMA6EA0A0J9YXQ4 647 aa19.15■□□□□ 0.66
VPS26A-207ENST00000490696 EGFRP00533 1210 aa19.15■□□□□ 0.66
VPS26A-207ENST00000490696 GYG1P46976 350 aa19.15■□□□□ 0.66
VPS26A-207ENST00000490696 ZNF280AP59817 542 aaPredicted RBP19.15■□□□□ 0.66
VPS26A-207ENST00000490696 GTF2IP78347 998 aa19.15■□□□□ 0.66
VPS26A-207ENST00000490696 PUM3Q15397 648 aaKnown RBP19.15■□□□□ 0.66
VPS26A-207ENST00000490696 CNTROBQ8N137 903 aa19.15■□□□□ 0.66
VPS26A-207ENST00000490696 PGAP2Q9UHJ9 254 aa19.15■□□□□ 0.66
VPS26A-207ENST00000490696 PASKQ96RG2 1323 aa19.15■□□□□ 0.66
VPS26A-207ENST00000490696 HIBADHP31937 336 aaKnown RBP19.14■□□□□ 0.65
VPS26A-207ENST00000490696 IL15P40933 162 aaPredicted RBP19.14■□□□□ 0.65
VPS26A-207ENST00000490696 FBXO33Q7Z6M2 555 aa19.14■□□□□ 0.65
VPS26A-207ENST00000490696 TDRD7Q8NHU6 1098 aaKnown RBP19.14■□□□□ 0.65
VPS26A-207ENST00000490696 ZC3H15Q8WU90 426 aaKnown RBP19.14■□□□□ 0.65
VPS26A-207ENST00000490696 FBXW7Q969H0 707 aa19.14■□□□□ 0.65
VPS26A-207ENST00000490696 C1orf115Q9H7X2 142 aa19.14■□□□□ 0.65
VPS26A-207ENST00000490696 MYO3BQ8WXR4 1341 aa19.14■□□□□ 0.65
VPS26A-207ENST00000490696 USP17L8P0C7I0 530 aa19.13■□□□□ 0.65
VPS26A-207ENST00000490696 MVPQ14764 893 aaKnown RBP19.13■□□□□ 0.65
VPS26A-207ENST00000490696 TBC1D10BQ4KMP7 808 aaPredicted RBP19.13■□□□□ 0.65
VPS26A-207ENST00000490696 CEP126Q9P2H0 1117 aa19.13■□□□□ 0.65
VPS26A-207ENST00000490696 SASH1O94885 1247 aa19.12■□□□□ 0.65
VPS26A-207ENST00000490696 ATP8B2P98198 1209 aa19.12■□□□□ 0.65
VPS26A-207ENST00000490696 POLA2Q14181 598 aa19.12■□□□□ 0.65
VPS26A-207ENST00000490696 KIF4BQ2VIQ3 1234 aa19.12■□□□□ 0.65
VPS26A-207ENST00000490696 LPIN2Q92539 896 aa19.12■□□□□ 0.65
VPS26A-207ENST00000490696 FAM205AQ6ZU69 1335 aa19.11■□□□□ 0.65
VPS26A-207ENST00000490696 IFIT1P09914 478 aaKnown RBP19.11■□□□□ 0.65
VPS26A-207ENST00000490696 RBM26Q5T8P6 1007 aaKnown RBP19.11■□□□□ 0.65
VPS26A-207ENST00000490696 CERS5Q8N5B7 392 aa19.11■□□□□ 0.65
VPS26A-207ENST00000490696 SSH3Q8TE77 659 aa19.11■□□□□ 0.65
VPS26A-207ENST00000490696 COG6Q9Y2V7 657 aa19.11■□□□□ 0.65
VPS26A-207ENST00000490696 SLC5A1P13866 664 aa19.1■□□□□ 0.65
VPS26A-207ENST00000490696 BCAMP50895 628 aa19.1■□□□□ 0.65
VPS26A-207ENST00000490696 FKBP1AP62942 108 aaKnown RBP19.1■□□□□ 0.65
VPS26A-207ENST00000490696 HTRA3P83110 453 aa19.1■□□□□ 0.65
VPS26A-207ENST00000490696 PDE3AQ14432 1141 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms