RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-256ENST00000490663 SRGAP3O43295 1099 aa23.18■■□□□ 1.3
C4A-256ENST00000490663 EPS15P42566 896 aa23.18■■□□□ 1.3
C4A-256ENST00000490663 C1QTNF8P60827 252 aa23.18■■□□□ 1.3
C4A-256ENST00000490663 FBXW7Q969H0 707 aa23.18■■□□□ 1.3
C4A-256ENST00000490663 TAF1DQ9H5J8 278 aaPredicted RBP23.18■■□□□ 1.3
C4A-256ENST00000490663 HACL1Q9UJ83 578 aa23.18■■□□□ 1.3
C4A-256ENST00000490663 EYA2O00167 538 aa23.17■■□□□ 1.3
C4A-256ENST00000490663 ZBTB7BO15156 539 aaPredicted RBP23.17■■□□□ 1.3
C4A-256ENST00000490663 EAPPQ56P03 285 aaPredicted RBP23.17■■□□□ 1.3
C4A-256ENST00000490663 ATG9AQ7Z3C6 839 aa23.17■■□□□ 1.3
C4A-256ENST00000490663 MXD3Q9BW11 206 aa23.17■■□□□ 1.3
C4A-256ENST00000490663 MROH5Q6ZUA9 1318 aa23.16■■□□□ 1.3
C4A-256ENST00000490663 EPHX2P34913 555 aa23.16■■□□□ 1.3
C4A-256ENST00000490663 TNIP1Q15025 636 aa23.16■■□□□ 1.3
C4A-256ENST00000490663 VGLL2Q8N8G2 317 aa23.16■■□□□ 1.3
C4A-256ENST00000490663 HDAC5Q9UQL6 1122 aa23.16■■□□□ 1.3
C4A-256ENST00000490663 TOMM70O94826 608 aa23.15■■□□□ 1.3
C4A-256ENST00000490663 LMOD1P29536 600 aaPredicted RBP23.15■■□□□ 1.3
C4A-256ENST00000490663 MVPQ14764 893 aaKnown RBP23.15■■□□□ 1.3
C4A-256ENST00000490663 IQCA1LA6NCM1 817 aa23.14■■□□□ 1.29
C4A-256ENST00000490663 GYG1P46976 350 aa23.14■■□□□ 1.29
C4A-256ENST00000490663 GPRC5DQ9NZD1 345 aa23.14■■□□□ 1.29
C4A-256ENST00000490663 JAG2Q9Y219 1238 aa23.14■■□□□ 1.29
C4A-256ENST00000490663 MTX1Q13505 466 aa23.13■■□□□ 1.29
C4A-256ENST00000490663 MS4A1P11836 297 aa23.12■■□□□ 1.29
C4A-256ENST00000490663 RBM46Q8TBY0 533 aaKnown RBP23.12■■□□□ 1.29
C4A-256ENST00000490663 COA1Q9GZY4 146 aa23.12■■□□□ 1.29
C4A-256ENST00000490663 CD209Q9NNX6 404 aa23.12■■□□□ 1.29
C4A-256ENST00000490663 COPRSQ9NQ92 184 aa23.12■■□□□ 1.29
C4A-256ENST00000490663 PDE8BO95263 885 aa23.11■■□□□ 1.29
C4A-256ENST00000490663 UBE4AQ14139 1066 aa23.11■■□□□ 1.29
C4A-256ENST00000490663 MICALL2Q8IY33 904 aa23.11■■□□□ 1.29
C4A-256ENST00000490663 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.11■■□□□ 1.29
C4A-256ENST00000490663 IQSEC3Q9UPP2 1182 aaPredicted RBP23.11■■□□□ 1.29
C4A-256ENST00000490663 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.11■■□□□ 1.29
C4A-256ENST00000490663 AKAP11Q9UKA4 1901 aa23.1■■□□□ 1.29
C4A-256ENST00000490663 USP17L3A6NCW0 530 aa23.1■■□□□ 1.29
C4A-256ENST00000490663 USP17L4A6NCW7 530 aa23.1■■□□□ 1.29
C4A-256ENST00000490663 VIL1P09327 827 aaKnown RBP23.1■■□□□ 1.29
C4A-256ENST00000490663 C15orf52Q6ZUT6 534 aaKnown RBP23.1■■□□□ 1.29
C4A-256ENST00000490663 USP17L1Q7RTZ2 530 aa23.1■■□□□ 1.29
C4A-256ENST00000490663 ZNF804AQ7Z570 1209 aa23.1■■□□□ 1.29
C4A-256ENST00000490663 PODNQ7Z5L7 613 aa23.1■■□□□ 1.29
C4A-256ENST00000490663 TRPM4Q8TD43 1214 aa23.1■■□□□ 1.29
C4A-256ENST00000490663 CNOT7Q9UIV1 285 aaKnown RBP23.1■■□□□ 1.29
C4A-256ENST00000490663 CLEC11AQ9Y240 323 aa23.1■■□□□ 1.29
C4A-256ENST00000490663 MYH2Q9UKX2 1941 aa23.1■■□□□ 1.29
C4A-256ENST00000490663 RRP1P56182 461 aaKnown RBP23.09■■□□□ 1.29
C4A-256ENST00000490663 GTF2IP78347 998 aa23.09■■□□□ 1.29
C4A-256ENST00000490663 RSBN1LQ6PCB5 846 aaPredicted RBP23.09■■□□□ 1.29
C4A-256ENST00000490663 CIAO1O76071 339 aa23.08■■□□□ 1.29
C4A-256ENST00000490663 EGFRP00533 1210 aa23.08■■□□□ 1.29
C4A-256ENST00000490663 ATP8B2P98198 1209 aa23.08■■□□□ 1.29
C4A-256ENST00000490663 DACT2Q5SW24 774 aa23.08■■□□□ 1.29
C4A-256ENST00000490663 CEP85Q6P2H3 762 aa23.08■■□□□ 1.29
C4A-256ENST00000490663 SAMD7Q7Z3H4 446 aa23.08■■□□□ 1.29
C4A-256ENST00000490663 FAM84BQ96KN1 310 aaPredicted RBP23.08■■□□□ 1.29
C4A-256ENST00000490663 DDX19BQ9UMR2 479 aa23.08■■□□□ 1.29
C4A-256ENST00000490663 FGFR2P21802 821 aa23.07■■□□□ 1.28
C4A-256ENST00000490663 TFCP2Q12800 502 aa23.07■■□□□ 1.28
C4A-256ENST00000490663 POLA2Q14181 598 aa23.07■■□□□ 1.28
C4A-256ENST00000490663 PUM3Q15397 648 aaKnown RBP23.07■■□□□ 1.28
C4A-256ENST00000490663 TBC1D10BQ4KMP7 808 aaPredicted RBP23.07■■□□□ 1.28
C4A-256ENST00000490663 RBM26Q5T8P6 1007 aaKnown RBP23.07■■□□□ 1.28
C4A-256ENST00000490663 SMC1BQ8NDV3 1235 aa23.07■■□□□ 1.28
C4A-256ENST00000490663 CEP126Q9P2H0 1117 aa23.07■■□□□ 1.28
C4A-256ENST00000490663 IL15P40933 162 aaPredicted RBP23.06■■□□□ 1.28
C4A-256ENST00000490663 PDE3AQ14432 1141 aa23.06■■□□□ 1.28
C4A-256ENST00000490663 ATP2B3Q16720 1220 aa23.06■■□□□ 1.28
C4A-256ENST00000490663 MAP1SQ66K74 1059 aaPredicted RBP23.06■■□□□ 1.28
C4A-256ENST00000490663 CHADLQ6NUI6 762 aa23.06■■□□□ 1.28
C4A-256ENST00000490663 SSH3Q8TE77 659 aa23.06■■□□□ 1.28
C4A-256ENST00000490663 ADARB2Q9NS39 739 aaKnown RBP23.06■■□□□ 1.28
C4A-256ENST00000490663 ZNF609O15014 1411 aa23.06■■□□□ 1.28
C4A-256ENST00000490663 COL1A1P02452 1464 aaPredicted RBP23.05■■□□□ 1.28
C4A-256ENST00000490663 IL1R1P14778 569 aa23.05■■□□□ 1.28
C4A-256ENST00000490663 ADORA1P30542 326 aa23.05■■□□□ 1.28
C4A-256ENST00000490663 HIBADHP31937 336 aaKnown RBP23.05■■□□□ 1.28
C4A-256ENST00000490663 BCAMP50895 628 aa23.05■■□□□ 1.28
C4A-256ENST00000490663 HIRAP54198 1017 aaPredicted RBP23.05■■□□□ 1.28
C4A-256ENST00000490663 TTLL5Q6EMB2 1281 aa23.05■■□□□ 1.28
C4A-256ENST00000490663 LDHDQ86WU2 507 aa23.05■■□□□ 1.28
C4A-256ENST00000490663 SLC5A1P13866 664 aa23.04■■□□□ 1.28
C4A-256ENST00000490663 RPS12P25398 132 aaKnown RBP23.04■■□□□ 1.28
C4A-256ENST00000490663 CERS5Q8N5B7 392 aa23.04■■□□□ 1.28
C4A-256ENST00000490663 DPF2Q92785 391 aa23.04■■□□□ 1.28
C4A-256ENST00000490663 GMLQ99445 158 aa23.04■■□□□ 1.28
C4A-256ENST00000490663 ZBTB40Q9NUA8 1239 aa23.04■■□□□ 1.28
C4A-256ENST00000490663 FBXO3Q9UK99 471 aa23.04■■□□□ 1.28
C4A-256ENST00000490663 H7C1D1 291 aa23.03■■□□□ 1.28
C4A-256ENST00000490663 IFIT1P09914 478 aaKnown RBP23.03■■□□□ 1.28
C4A-256ENST00000490663 CHAF1AQ13111 956 aaPredicted RBP23.03■■□□□ 1.28
C4A-256ENST00000490663 STRIP1Q5VSL9 837 aa23.03■■□□□ 1.28
C4A-256ENST00000490663 VPS37DQ86XT2 251 aa23.03■■□□□ 1.28
C4A-256ENST00000490663 ASTN2O75129 1339 aaPredicted RBP23.03■■□□□ 1.28
C4A-256ENST00000490663 SASH1O94885 1247 aa23.02■■□□□ 1.28
C4A-256ENST00000490663 HTRA3P83110 453 aa23.02■■□□□ 1.28
C4A-256ENST00000490663 FMR1Q06787 632 aaKnown RBP eCLIP23.02■■□□□ 1.28
C4A-256ENST00000490663 FSTL1Q12841 308 aa23.02■■□□□ 1.28
C4A-256ENST00000490663 G3BP1Q13283 466 aaKnown RBP eCLIP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms