RNA–Protein interactions for RNA: ENST00000490600.6

MCOLN3-206, Transcript of mucolipin 3, humanhuman

TSL 1 (best)

Gene MCOLN3, Length 2,777 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCOLN3-206ENST00000490600 SNAP23O00161 211 aa16.48■□□□□ 0.23
MCOLN3-206ENST00000490600 ANKRD1Q15327 319 aa16.48■□□□□ 0.23
MCOLN3-206ENST00000490600 SUSD4Q5VX71 490 aa16.48■□□□□ 0.23
MCOLN3-206ENST00000490600 LARP1BQ659C4 914 aaKnown RBP16.48■□□□□ 0.23
MCOLN3-206ENST00000490600 LRSAM1Q6UWE0 723 aa16.48■□□□□ 0.23
MCOLN3-206ENST00000490600 CHST3Q7LGC8 479 aa16.48■□□□□ 0.23
MCOLN3-206ENST00000490600 HELBQ8NG08 1087 aaPredicted RBP16.48■□□□□ 0.23
MCOLN3-206ENST00000490600 BRF1Q92994 677 aa16.48■□□□□ 0.23
MCOLN3-206ENST00000490600 PUS7LQ9H0K6 701 aaKnown RBP16.48■□□□□ 0.23
MCOLN3-206ENST00000490600 CNNM1Q9NRU3 951 aa16.48■□□□□ 0.23
MCOLN3-206ENST00000490600 SPATA31A5Q5VU36 1347 aa16.47■□□□□ 0.23
MCOLN3-206ENST00000490600 SPATA31A7Q8IWB4 1347 aa16.47■□□□□ 0.23
MCOLN3-206ENST00000490600 ANKRD18BA2A2Z9 1011 aa16.47■□□□□ 0.23
MCOLN3-206ENST00000490600 ERVV-1B6SEH8 477 aa16.47■□□□□ 0.23
MCOLN3-206ENST00000490600 GTF3C6Q969F1 213 aa16.47■□□□□ 0.23
MCOLN3-206ENST00000490600 LOC102724428A0A0B4J2F2 783 aa16.47■□□□□ 0.23
MCOLN3-206ENST00000490600 SIK1P57059 783 aa16.47■□□□□ 0.23
MCOLN3-206ENST00000490600 E7EWF7 191 aa16.46■□□□□ 0.23
MCOLN3-206ENST00000490600 PDE8AO60658 829 aa16.46■□□□□ 0.23
MCOLN3-206ENST00000490600 CCDC87Q9NVE4 849 aa16.46■□□□□ 0.23
MCOLN3-206ENST00000490600 PPFIA3O75145 1194 aa16.46■□□□□ 0.23
MCOLN3-206ENST00000490600 KCNQ4P56696 695 aa16.46■□□□□ 0.23
MCOLN3-206ENST00000490600 SCRN1Q12765 414 aa16.46■□□□□ 0.23
MCOLN3-206ENST00000490600 WASHC4Q2M389 1173 aa16.46■□□□□ 0.23
MCOLN3-206ENST00000490600 COL4A1P02462 1669 aa16.46■□□□□ 0.22
MCOLN3-206ENST00000490600 HAND2P61296 217 aa16.45■□□□□ 0.22
MCOLN3-206ENST00000490600 MYH7P12883 1935 aa16.45■□□□□ 0.22
MCOLN3-206ENST00000490600 HSP90B1P14625 803 aaKnown RBP16.45■□□□□ 0.22
MCOLN3-206ENST00000490600 PHKA1P46020 1223 aa16.45■□□□□ 0.22
MCOLN3-206ENST00000490600 APOBRQ0VD83 1088 aa16.45■□□□□ 0.22
MCOLN3-206ENST00000490600 RNF214Q8ND24 703 aa16.45■□□□□ 0.22
MCOLN3-206ENST00000490600 SEC31BQ9NQW1 1179 aa16.45■□□□□ 0.22
MCOLN3-206ENST00000490600 GPHNQ9NQX3 736 aaPredicted RBP16.45■□□□□ 0.22
MCOLN3-206ENST00000490600 CAMTA2O94983 1202 aa16.44■□□□□ 0.22
MCOLN3-206ENST00000490600 EXOSC10Q01780 885 aaKnown RBP16.44■□□□□ 0.22
MCOLN3-206ENST00000490600 AEBP2Q6ZN18 517 aaPredicted RBP16.44■□□□□ 0.22
MCOLN3-206ENST00000490600 SMIM5Q71RC9 77 aa16.44■□□□□ 0.22
MCOLN3-206ENST00000490600 DDX11Q96FC9 970 aa16.44■□□□□ 0.22
MCOLN3-206ENST00000490600 THRAP3Q9Y2W1 955 aaKnown RBP16.44■□□□□ 0.22
MCOLN3-206ENST00000490600 PDE8BO95263 885 aa16.44■□□□□ 0.22
MCOLN3-206ENST00000490600 DHX32Q7L7V1 743 aaKnown RBP16.44■□□□□ 0.22
MCOLN3-206ENST00000490600 CDCA7Q9BWT1 371 aaPredicted RBP16.44■□□□□ 0.22
MCOLN3-206ENST00000490600 LRP5O75197 1615 aa16.44■□□□□ 0.22
MCOLN3-206ENST00000490600 PTF1AQ7RTS3 328 aa16.43■□□□□ 0.22
MCOLN3-206ENST00000490600 PIH1D3Q9NQM4 214 aaKnown RBP16.43■□□□□ 0.22
MCOLN3-206ENST00000490600 NKX2-3Q8TAU0 364 aa16.43■□□□□ 0.22
MCOLN3-206ENST00000490600 DDX60Q8IY21 1712 aaKnown RBP16.43■□□□□ 0.22
MCOLN3-206ENST00000490600 CTDNEP1O95476 244 aa16.43■□□□□ 0.22
MCOLN3-206ENST00000490600 PPP1R9BQ96SB3 815 aa16.43■□□□□ 0.22
MCOLN3-206ENST00000490600 NCOA5Q9HCD5 579 aaKnown RBP16.43■□□□□ 0.22
MCOLN3-206ENST00000490600 FGAP02671 866 aa16.42■□□□□ 0.22
MCOLN3-206ENST00000490600 UBE2HP62256 183 aa16.42■□□□□ 0.22
MCOLN3-206ENST00000490600 CCT2P78371 535 aaKnown RBP16.42■□□□□ 0.22
MCOLN3-206ENST00000490600 CCDC102BQ68D86 513 aa16.42■□□□□ 0.22
MCOLN3-206ENST00000490600 TTC6Q86TZ1 520 aa16.42■□□□□ 0.22
MCOLN3-206ENST00000490600 DENND2AQ9ULE3 1009 aa16.42■□□□□ 0.22
MCOLN3-206ENST00000490600 RREB1Q92766 1687 aa16.42■□□□□ 0.22
MCOLN3-206ENST00000490600 FGD1P98174 961 aa16.42■□□□□ 0.22
MCOLN3-206ENST00000490600 FAM98CQ17RN3 349 aaKnown RBP16.42■□□□□ 0.22
MCOLN3-206ENST00000490600 APPBP2Q92624 585 aa16.42■□□□□ 0.22
MCOLN3-206ENST00000490600 ATP6V1DQ9Y5K8 247 aa16.42■□□□□ 0.22
MCOLN3-206ENST00000490600 GPAA1O43292 621 aa16.41■□□□□ 0.22
MCOLN3-206ENST00000490600 FOSBP53539 338 aa16.41■□□□□ 0.22
MCOLN3-206ENST00000490600 AGXT2Q9BYV1 514 aa16.41■□□□□ 0.22
MCOLN3-206ENST00000490600 FGFR2P21802 821 aa16.4■□□□□ 0.22
MCOLN3-206ENST00000490600 CCDC173Q0VFZ6 552 aa16.4■□□□□ 0.22
MCOLN3-206ENST00000490600 TFIP11Q9UBB9 837 aaKnown RBP16.4■□□□□ 0.22
MCOLN3-206ENST00000490600 PFKFB2O60825 505 aa16.4■□□□□ 0.22
MCOLN3-206ENST00000490600 TICAM2Q86XR7 235 aa16.4■□□□□ 0.22
MCOLN3-206ENST00000490600 NSUN7Q8NE18 718 aaKnown RBP16.4■□□□□ 0.22
MCOLN3-206ENST00000490600 UTP14AQ9BVJ6 771 aaKnown RBP16.4■□□□□ 0.22
MCOLN3-206ENST00000490600 WWC3Q9ULE0 1092 aa16.4■□□□□ 0.22
MCOLN3-206ENST00000490600 NIP7Q9Y221 180 aaKnown RBP eCLIP16.4■□□□□ 0.22
MCOLN3-206ENST00000490600 ABCC12Q96J65 1359 aa16.39■□□□□ 0.21
MCOLN3-206ENST00000490600 IDH1O75874 414 aaKnown RBP16.39■□□□□ 0.21
MCOLN3-206ENST00000490600 NTSR2O95665 410 aa16.39■□□□□ 0.21
MCOLN3-206ENST00000490600 ZFYP08048 801 aaPredicted RBP16.39■□□□□ 0.21
MCOLN3-206ENST00000490600 HMGB1P09429 215 aaKnown RBP16.39■□□□□ 0.21
MCOLN3-206ENST00000490600 ADD2P35612 726 aa16.39■□□□□ 0.21
MCOLN3-206ENST00000490600 SLC9C2Q5TAH2 1124 aa16.39■□□□□ 0.21
MCOLN3-206ENST00000490600 BARGINQ6ZT62 677 aa16.39■□□□□ 0.21
MCOLN3-206ENST00000490600 NBPF3Q9H094 633 aa16.39■□□□□ 0.21
MCOLN3-206ENST00000490600 PDCP20941 246 aa16.39■□□□□ 0.21
MCOLN3-206ENST00000490600 SMARCC2Q8TAQ2 1214 aa16.39■□□□□ 0.21
MCOLN3-206ENST00000490600 NAP1L2Q9ULW6 460 aaPredicted RBP16.39■□□□□ 0.21
MCOLN3-206ENST00000490600 TAF1P21675 1872 aa16.39■□□□□ 0.21
MCOLN3-206ENST00000490600 WTIPA6NIX2 430 aaPredicted RBP16.38■□□□□ 0.21
MCOLN3-206ENST00000490600 PUM3Q15397 648 aaKnown RBP16.38■□□□□ 0.21
MCOLN3-206ENST00000490600 LINC00116Q8NCU8 138 aa16.38■□□□□ 0.21
MCOLN3-206ENST00000490600 TSPY26PQ9H489 355 aa16.38■□□□□ 0.21
MCOLN3-206ENST00000490600 COL5A3P25940 1745 aaPredicted RBP16.38■□□□□ 0.21
MCOLN3-206ENST00000490600 ARID4AP29374 1257 aaPredicted RBP16.38■□□□□ 0.21
MCOLN3-206ENST00000490600 PDIA3P30101 505 aaKnown RBP16.38■□□□□ 0.21
MCOLN3-206ENST00000490600 CCDC183Q5T5S1 534 aa16.38■□□□□ 0.21
MCOLN3-206ENST00000490600 C3orf67Q6ZVT6 689 aa16.38■□□□□ 0.21
MCOLN3-206ENST00000490600 SYAP1Q96A49 352 aaPredicted RBP16.38■□□□□ 0.21
MCOLN3-206ENST00000490600 ARAP2Q8WZ64 1704 aa16.38■□□□□ 0.21
MCOLN3-206ENST00000490600 EP400Q96L91 3159 aa16.38■□□□□ 0.21
MCOLN3-206ENST00000490600 RAB11FIP4Q86YS3 637 aa16.38■□□□□ 0.21
MCOLN3-206ENST00000490600 ZNF512BQ96KM6 892 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms