RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 AGBL3Q8NEM8 1001 aa14.35□□□□□ -0.11
DUBR-204ENST00000490441 USP17L3A6NCW0 530 aa14.34□□□□□ -0.11
DUBR-204ENST00000490441 USP17L4A6NCW7 530 aa14.34□□□□□ -0.11
DUBR-204ENST00000490441 EGFRP00533 1210 aa14.34□□□□□ -0.11
DUBR-204ENST00000490441 HUNKP57058 714 aa14.34□□□□□ -0.11
DUBR-204ENST00000490441 USP17L1Q7RTZ2 530 aa14.34□□□□□ -0.11
DUBR-204ENST00000490441 PODNQ7Z5L7 613 aa14.34□□□□□ -0.11
DUBR-204ENST00000490441 C2orf69Q8N8R5 385 aa14.34□□□□□ -0.11
DUBR-204ENST00000490441 LINS1Q8NG48 757 aa14.34□□□□□ -0.11
DUBR-204ENST00000490441 MPHOSPH8Q99549 860 aa14.34□□□□□ -0.11
DUBR-204ENST00000490441 GGA3Q9NZ52 723 aa14.34□□□□□ -0.11
DUBR-204ENST00000490441 MINPP1Q9UNW1 487 aa14.34□□□□□ -0.11
DUBR-204ENST00000490441 MED23Q9ULK4 1368 aa14.34□□□□□ -0.11
DUBR-204ENST00000490441 POLR2AP24928 1970 aaKnown RBP14.33□□□□□ -0.12
DUBR-204ENST00000490441 ADM5C9JUS6 153 aa14.33□□□□□ -0.12
DUBR-204ENST00000490441 USP17L8P0C7I0 530 aa14.33□□□□□ -0.12
DUBR-204ENST00000490441 CCT4P50991 539 aaKnown RBP14.33□□□□□ -0.12
DUBR-204ENST00000490441 EXOSC9Q06265 439 aaKnown RBP14.33□□□□□ -0.12
DUBR-204ENST00000490441 PLA2G12BQ9BX93 195 aa14.33□□□□□ -0.12
DUBR-204ENST00000490441 GBA2Q9HCG7 927 aaPredicted RBP14.33□□□□□ -0.12
DUBR-204ENST00000490441 ZNF609O15014 1411 aa14.32□□□□□ -0.12
DUBR-204ENST00000490441 SPEF2Q9C093 1822 aa14.32□□□□□ -0.12
DUBR-204ENST00000490441 CA12O43570 354 aa14.32□□□□□ -0.12
DUBR-204ENST00000490441 VAMP4O75379 141 aa14.32□□□□□ -0.12
DUBR-204ENST00000490441 ITGA6P23229 1130 aa14.32□□□□□ -0.12
DUBR-204ENST00000490441 ZNF280AP59817 542 aaPredicted RBP14.32□□□□□ -0.12
DUBR-204ENST00000490441 NOGQ13253 232 aa14.32□□□□□ -0.12
DUBR-204ENST00000490441 FAM161AQ3B820 660 aa14.32□□□□□ -0.12
DUBR-204ENST00000490441 FAM9BQ8IZU0 186 aa14.32□□□□□ -0.12
DUBR-204ENST00000490441 FBXW7Q969H0 707 aa14.32□□□□□ -0.12
DUBR-204ENST00000490441 ANKRD2Q9GZV1 360 aa14.32□□□□□ -0.12
DUBR-204ENST00000490441 LEMD3Q9Y2U8 911 aa14.32□□□□□ -0.12
DUBR-204ENST00000490441 KCNJ4P48050 445 aa14.31□□□□□ -0.12
DUBR-204ENST00000490441 BRPF1P55201 1214 aaPredicted RBP14.31□□□□□ -0.12
DUBR-204ENST00000490441 SCARF1Q14162 830 aa14.31□□□□□ -0.12
DUBR-204ENST00000490441 ANGEL2Q5VTE6 544 aaKnown RBP14.31□□□□□ -0.12
DUBR-204ENST00000490441 DLK2Q6UY11 383 aa14.31□□□□□ -0.12
DUBR-204ENST00000490441 PSME4Q14997 1843 aa14.31□□□□□ -0.12
DUBR-204ENST00000490441 ANKRD18BA2A2Z9 1011 aa14.3□□□□□ -0.12
DUBR-204ENST00000490441 OGFOD1Q8N543 542 aa14.3□□□□□ -0.12
DUBR-204ENST00000490441 COA1Q9GZY4 146 aa14.3□□□□□ -0.12
DUBR-204ENST00000490441 MYOZ2Q9NPC6 264 aa14.3□□□□□ -0.12
DUBR-204ENST00000490441 TSKSQ9UJT2 592 aa14.3□□□□□ -0.12
DUBR-204ENST00000490441 CHMP3Q9Y3E7 222 aa14.3□□□□□ -0.12
DUBR-204ENST00000490441 ZNF804BA4D1E1 1349 aa14.3□□□□□ -0.12
DUBR-204ENST00000490441 MYO3BQ8WXR4 1341 aa14.3□□□□□ -0.12
DUBR-204ENST00000490441 CSF1RP07333 972 aa14.29□□□□□ -0.12
DUBR-204ENST00000490441 CASP7P55210 303 aa14.29□□□□□ -0.12
DUBR-204ENST00000490441 RGMBQ6NW40 437 aa14.29□□□□□ -0.12
DUBR-204ENST00000490441 CCDC102AQ96A19 550 aa14.29□□□□□ -0.12
DUBR-204ENST00000490441 GMLQ99445 158 aa14.29□□□□□ -0.12
DUBR-204ENST00000490441 ASTN2O75129 1339 aaPredicted RBP14.29□□□□□ -0.12
DUBR-204ENST00000490441 WTIPA6NIX2 430 aaPredicted RBP14.28□□□□□ -0.12
DUBR-204ENST00000490441 F6X3S4 739 aa14.28□□□□□ -0.12
DUBR-204ENST00000490441 ZNF157P51786 506 aaPredicted RBP14.28□□□□□ -0.12
DUBR-204ENST00000490441 IFIT5Q13325 482 aaKnown RBP14.28□□□□□ -0.12
DUBR-204ENST00000490441 STRIP1Q5VSL9 837 aa14.28□□□□□ -0.12
DUBR-204ENST00000490441 CDCA5Q96FF9 252 aa14.28□□□□□ -0.12
DUBR-204ENST00000490441 PITPNM2Q9BZ72 1349 aa14.28□□□□□ -0.12
DUBR-204ENST00000490441 CHRNDQ07001 517 aa14.27□□□□□ -0.13
DUBR-204ENST00000490441 DACT2Q5SW24 774 aa14.27□□□□□ -0.13
DUBR-204ENST00000490441 BEND3Q5T5X7 828 aa14.27□□□□□ -0.13
DUBR-204ENST00000490441 MMP14P50281 582 aa14.26□□□□□ -0.13
DUBR-204ENST00000490441 FKBP1BP68106 108 aa14.26□□□□□ -0.13
DUBR-204ENST00000490441 TAF7LQ5H9L4 462 aa14.26□□□□□ -0.13
DUBR-204ENST00000490441 TTLL5Q6EMB2 1281 aa14.26□□□□□ -0.13
DUBR-204ENST00000490441 TXNRD3Q86VQ6 643 aa14.26□□□□□ -0.13
DUBR-204ENST00000490441 ABHD8Q96I13 439 aa14.26□□□□□ -0.13
DUBR-204ENST00000490441 MXD3Q9BW11 206 aa14.26□□□□□ -0.13
DUBR-204ENST00000490441 C9orf78Q9NZ63 289 aaPredicted RBP14.26□□□□□ -0.13
DUBR-204ENST00000490441 HDAC9Q9UKV0 1011 aa14.26□□□□□ -0.13
DUBR-204ENST00000490441 GRM8O00222 908 aa14.25□□□□□ -0.13
DUBR-204ENST00000490441 KLRK1P26718 216 aa14.25□□□□□ -0.13
DUBR-204ENST00000490441 CCDC57Q2TAC2 916 aa14.25□□□□□ -0.13
DUBR-204ENST00000490441 SLC4A10Q6U841 1118 aa14.25□□□□□ -0.13
DUBR-204ENST00000490441 ZIC5Q96T25 663 aa14.25□□□□□ -0.13
DUBR-204ENST00000490441 SPDYE2BA6NHP3 402 aa14.24□□□□□ -0.13
DUBR-204ENST00000490441 FAM155AB1AL88 458 aaPredicted RBP14.24□□□□□ -0.13
DUBR-204ENST00000490441 SPDYE6P0CI01 402 aa14.24□□□□□ -0.13
DUBR-204ENST00000490441 NF2P35240 595 aa14.24□□□□□ -0.13
DUBR-204ENST00000490441 GTF2IP78347 998 aa14.24□□□□□ -0.13
DUBR-204ENST00000490441 FOXO4P98177 505 aa14.24□□□□□ -0.13
DUBR-204ENST00000490441 KIF23Q02241 960 aaPredicted RBP14.24□□□□□ -0.13
DUBR-204ENST00000490441 NBPF9Q3BBW0 867 aa14.24□□□□□ -0.13
DUBR-204ENST00000490441 SPDYE2Q495Y8 402 aa14.24□□□□□ -0.13
DUBR-204ENST00000490441 LMBR1LQ6UX01 489 aa14.24□□□□□ -0.13
DUBR-204ENST00000490441 KIAA0825Q8IV33 1275 aa14.24□□□□□ -0.13
DUBR-204ENST00000490441 WNT10BO00744 389 aa14.23□□□□□ -0.13
DUBR-204ENST00000490441 TAF5LO75529 589 aa14.23□□□□□ -0.13
DUBR-204ENST00000490441 ALDH1L1O75891 902 aa14.23□□□□□ -0.13
DUBR-204ENST00000490441 SLC10A3P09131 477 aa14.23□□□□□ -0.13
DUBR-204ENST00000490441 TTLL12Q14166 644 aaPredicted RBP14.23□□□□□ -0.13
DUBR-204ENST00000490441 ZNF804AQ7Z570 1209 aa14.23□□□□□ -0.13
DUBR-204ENST00000490441 HELBQ8NG08 1087 aaPredicted RBP14.23□□□□□ -0.13
DUBR-204ENST00000490441 SRCIN1Q9C0H9 1055 aa14.23□□□□□ -0.13
DUBR-204ENST00000490441 CD209Q9NNX6 404 aa14.23□□□□□ -0.13
DUBR-204ENST00000490441 CNNM1Q9NRU3 951 aa14.23□□□□□ -0.13
DUBR-204ENST00000490441 CASP8AP2Q9UKL3 1982 aa14.23□□□□□ -0.13
DUBR-204ENST00000490441 PAPPA2Q9BXP8 1791 aa14.22□□□□□ -0.13
DUBR-204ENST00000490441 SASH1O94885 1247 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms