RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 DPY19L2Q6NUT2 758 aa17.87■□□□□ 0.45
SRGAP3-208ENST00000490348 GPC2Q8N158 579 aa17.87■□□□□ 0.45
SRGAP3-208ENST00000490348 CHMP4BQ9H444 224 aaKnown RBP17.87■□□□□ 0.45
SRGAP3-208ENST00000490348 GPBP1L1Q9HC44 474 aaPredicted RBP17.87■□□□□ 0.45
SRGAP3-208ENST00000490348 KDM2BQ8NHM5 1336 aa17.86■□□□□ 0.45
SRGAP3-208ENST00000490348 WDR90Q96KV7 1748 aa17.86■□□□□ 0.45
SRGAP3-208ENST00000490348 PUM3Q15397 648 aaKnown RBP17.86■□□□□ 0.45
SRGAP3-208ENST00000490348 L3MBTL3Q96JM7 780 aaPredicted RBP17.86■□□□□ 0.45
SRGAP3-208ENST00000490348 NOP58Q9Y2X3 529 aaKnown RBP17.86■□□□□ 0.45
SRGAP3-208ENST00000490348 SASH1O94885 1247 aa17.85■□□□□ 0.45
SRGAP3-208ENST00000490348 GYG1P46976 350 aa17.85■□□□□ 0.45
SRGAP3-208ENST00000490348 TFCP2Q12800 502 aa17.85■□□□□ 0.45
SRGAP3-208ENST00000490348 RPAP2Q8IXW5 612 aaPredicted RBP17.85■□□□□ 0.45
SRGAP3-208ENST00000490348 FAM84BQ96KN1 310 aaPredicted RBP17.85■□□□□ 0.45
SRGAP3-208ENST00000490348 COA1Q9GZY4 146 aa17.85■□□□□ 0.45
SRGAP3-208ENST00000490348 CEP126Q9P2H0 1117 aa17.85■□□□□ 0.45
SRGAP3-208ENST00000490348 GJA3Q9Y6H8 435 aa17.85■□□□□ 0.45
SRGAP3-208ENST00000490348 PSMD14O00487 310 aa17.84■□□□□ 0.45
SRGAP3-208ENST00000490348 CIAPIN1Q6FI81 312 aa17.84■□□□□ 0.45
SRGAP3-208ENST00000490348 PODNQ7Z5L7 613 aa17.84■□□□□ 0.45
SRGAP3-208ENST00000490348 RRAGCQ9HB90 399 aa17.84■□□□□ 0.45
SRGAP3-208ENST00000490348 CD209Q9NNX6 404 aa17.84■□□□□ 0.45
SRGAP3-208ENST00000490348 ZNF646O15015 1829 aaPredicted RBP17.84■□□□□ 0.45
SRGAP3-208ENST00000490348 KIF3CO14782 793 aa17.83■□□□□ 0.45
SRGAP3-208ENST00000490348 SURF6O75683 361 aaKnown RBP17.83■□□□□ 0.45
SRGAP3-208ENST00000490348 SCNN1DP51172 638 aa17.83■□□□□ 0.45
SRGAP3-208ENST00000490348 PCDHB15Q9Y5E8 787 aa17.83■□□□□ 0.45
SRGAP3-208ENST00000490348 G3V3G9 751 aa17.83■□□□□ 0.44
SRGAP3-208ENST00000490348 IL1R1P14778 569 aa17.83■□□□□ 0.44
SRGAP3-208ENST00000490348 G3BP1Q13283 466 aaKnown RBP eCLIP17.83■□□□□ 0.44
SRGAP3-208ENST00000490348 ATP2B3Q16720 1220 aa17.83■□□□□ 0.44
SRGAP3-208ENST00000490348 DCAF8Q5TAQ9 597 aa17.83■□□□□ 0.44
SRGAP3-208ENST00000490348 FBXO33Q7Z6M2 555 aa17.83■□□□□ 0.44
SRGAP3-208ENST00000490348 LPIN2Q92539 896 aa17.83■□□□□ 0.44
SRGAP3-208ENST00000490348 EXOC6BQ9Y2D4 811 aa17.83■□□□□ 0.44
SRGAP3-208ENST00000490348 ZBTB12Q9Y330 459 aaPredicted RBP17.83■□□□□ 0.44
SRGAP3-208ENST00000490348 VIL1P09327 827 aaKnown RBP17.82■□□□□ 0.44
SRGAP3-208ENST00000490348 GMPSP49915 693 aaPredicted RBP17.82■□□□□ 0.44
SRGAP3-208ENST00000490348 TNIP1Q15025 636 aa17.82■□□□□ 0.44
SRGAP3-208ENST00000490348 PSME4Q14997 1843 aa17.82■□□□□ 0.44
SRGAP3-208ENST00000490348 ADORA1P30542 326 aa17.81■□□□□ 0.44
SRGAP3-208ENST00000490348 HIBADHP31937 336 aaKnown RBP17.81■□□□□ 0.44
SRGAP3-208ENST00000490348 BCAMP50895 628 aa17.81■□□□□ 0.44
SRGAP3-208ENST00000490348 TIMM10P62072 90 aa17.81■□□□□ 0.44
SRGAP3-208ENST00000490348 ZNF804AQ7Z570 1209 aa17.81■□□□□ 0.44
SRGAP3-208ENST00000490348 MXD3Q9BW11 206 aa17.81■□□□□ 0.44
SRGAP3-208ENST00000490348 SHTN1A0MZ66 631 aa17.8■□□□□ 0.44
SRGAP3-208ENST00000490348 USP17L3A6NCW0 530 aa17.8■□□□□ 0.44
SRGAP3-208ENST00000490348 USP17L4A6NCW7 530 aa17.8■□□□□ 0.44
SRGAP3-208ENST00000490348 IFIT1P09914 478 aaKnown RBP17.8■□□□□ 0.44
SRGAP3-208ENST00000490348 SLC5A1P13866 664 aa17.8■□□□□ 0.44
SRGAP3-208ENST00000490348 DACT2Q5SW24 774 aa17.8■□□□□ 0.44
SRGAP3-208ENST00000490348 USP17L1Q7RTZ2 530 aa17.8■□□□□ 0.44
SRGAP3-208ENST00000490348 EXOC6Q8TAG9 804 aa17.8■□□□□ 0.44
SRGAP3-208ENST00000490348 ZNF609O15014 1411 aa17.8■□□□□ 0.44
SRGAP3-208ENST00000490348 A0A1B0GUL7 405 aa17.79■□□□□ 0.44
SRGAP3-208ENST00000490348 VEGFAP15692 232 aaPredicted RBP17.79■□□□□ 0.44
SRGAP3-208ENST00000490348 EPS15P42566 896 aa17.79■□□□□ 0.44
SRGAP3-208ENST00000490348 TDRD7Q8NHU6 1098 aaKnown RBP17.79■□□□□ 0.44
SRGAP3-208ENST00000490348 ARAP2Q8WZ64 1704 aa17.79■□□□□ 0.44
SRGAP3-208ENST00000490348 HMMRO75330 724 aa17.79■□□□□ 0.44
SRGAP3-208ENST00000490348 GTF2IP78347 998 aa17.79■□□□□ 0.44
SRGAP3-208ENST00000490348 IRX6P78412 446 aaPredicted RBP17.79■□□□□ 0.44
SRGAP3-208ENST00000490348 OS9Q13438 667 aaPredicted RBP17.79■□□□□ 0.44
SRGAP3-208ENST00000490348 STRIP1Q5VSL9 837 aa17.79■□□□□ 0.44
SRGAP3-208ENST00000490348 RSBN1LQ6PCB5 846 aaPredicted RBP17.79■□□□□ 0.44
SRGAP3-208ENST00000490348 GMLQ99445 158 aa17.79■□□□□ 0.44
SRGAP3-208ENST00000490348 TAF1DQ9H5J8 278 aaPredicted RBP17.79■□□□□ 0.44
SRGAP3-208ENST00000490348 GPRC5DQ9NZD1 345 aa17.79■□□□□ 0.44
SRGAP3-208ENST00000490348 IQSEC3Q9UPP2 1182 aaPredicted RBP17.79■□□□□ 0.44
SRGAP3-208ENST00000490348 JAG2Q9Y219 1238 aa17.79■□□□□ 0.44
SRGAP3-208ENST00000490348 CEP350Q5VT06 3117 aa17.78■□□□□ 0.44
SRGAP3-208ENST00000490348 SCN4AP35499 1836 aa17.78■□□□□ 0.44
SRGAP3-208ENST00000490348 CAVIN4Q5BKX8 364 aa17.78■□□□□ 0.44
SRGAP3-208ENST00000490348 TTLL5Q6EMB2 1281 aa17.78■□□□□ 0.44
SRGAP3-208ENST00000490348 COL1A1P02452 1464 aaPredicted RBP17.77■□□□□ 0.44
SRGAP3-208ENST00000490348 PHKA1P46020 1223 aa17.77■□□□□ 0.44
SRGAP3-208ENST00000490348 TNNI3KQ59H18 835 aa17.77■□□□□ 0.44
SRGAP3-208ENST00000490348 CERS5Q8N5B7 392 aa17.77■□□□□ 0.44
SRGAP3-208ENST00000490348 XAGE2Q96GT9 111 aa17.77■□□□□ 0.44
SRGAP3-208ENST00000490348 HACL1Q9UJ83 578 aa17.77■□□□□ 0.44
SRGAP3-208ENST00000490348 AKAP2Q9Y2D5 859 aa17.77■□□□□ 0.44
SRGAP3-208ENST00000490348 FPGT-TNNI3KV9GXZ4 949 aa17.77■□□□□ 0.44
SRGAP3-208ENST00000490348 IQCA1LA6NCM1 817 aa17.76■□□□□ 0.43
SRGAP3-208ENST00000490348 POTEIP0CG38 1075 aa17.76■□□□□ 0.43
SRGAP3-208ENST00000490348 POTEJP0CG39 1038 aa17.76■□□□□ 0.43
SRGAP3-208ENST00000490348 VPS37DQ86XT2 251 aa17.76■□□□□ 0.43
SRGAP3-208ENST00000490348 DPF2Q92785 391 aa17.76■□□□□ 0.43
SRGAP3-208ENST00000490348 FBXW7Q969H0 707 aa17.76■□□□□ 0.43
SRGAP3-208ENST00000490348 GPR108Q9NPR9 543 aa17.76■□□□□ 0.43
SRGAP3-208ENST00000490348 RPS12P25398 132 aaKnown RBP17.75■□□□□ 0.43
SRGAP3-208ENST00000490348 EPHX2P34913 555 aa17.75■□□□□ 0.43
SRGAP3-208ENST00000490348 CCDC102BQ68D86 513 aa17.75■□□□□ 0.43
SRGAP3-208ENST00000490348 FAM205AQ6ZU69 1335 aa17.75■□□□□ 0.43
SRGAP3-208ENST00000490348 MICALL2Q8IY33 904 aa17.75■□□□□ 0.43
SRGAP3-208ENST00000490348 CNOT7Q9UIV1 285 aaKnown RBP17.75■□□□□ 0.43
SRGAP3-208ENST00000490348 APBB1O00213 710 aa17.74■□□□□ 0.43
SRGAP3-208ENST00000490348 EGFRP00533 1210 aa17.74■□□□□ 0.43
SRGAP3-208ENST00000490348 AGBL3Q8NEM8 1001 aa17.74■□□□□ 0.43
SRGAP3-208ENST00000490348 RHPN1Q8TCX5 695 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms