RNA–Protein interactions for RNA: ENST00000490305.5

HLA-DOA-205, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-205ENST00000490305 LRRFIP1Q32MZ4 808 aaKnown RBP16.07■□□□□ 0.16
HLA-DOA-205ENST00000490305 DIAPH3Q9NSV4 1193 aa16.07■□□□□ 0.16
HLA-DOA-205ENST00000490305 ANKIB1Q9P2G1 1089 aa16.07■□□□□ 0.16
HLA-DOA-205ENST00000490305 ZNF804BA4D1E1 1349 aa16.07■□□□□ 0.16
HLA-DOA-205ENST00000490305 C10orf71Q711Q0 1435 aa16.07■□□□□ 0.16
HLA-DOA-205ENST00000490305 AKAP11Q9UKA4 1901 aa16.07■□□□□ 0.16
HLA-DOA-205ENST00000490305 KIF13BQ9NQT8 1826 aa16.06■□□□□ 0.16
HLA-DOA-205ENST00000490305 REC8O95072 547 aa16.06■□□□□ 0.16
HLA-DOA-205ENST00000490305 PHKA1P46020 1223 aa16.06■□□□□ 0.16
HLA-DOA-205ENST00000490305 R3HDM1Q15032 1099 aaKnown RBP16.06■□□□□ 0.16
HLA-DOA-205ENST00000490305 TTF1Q15361 905 aaPredicted RBP16.06■□□□□ 0.16
HLA-DOA-205ENST00000490305 CNKSR1Q969H4 720 aa16.06■□□□□ 0.16
HLA-DOA-205ENST00000490305 ZNF622Q969S3 477 aaKnown RBP eCLIP16.06■□□□□ 0.16
HLA-DOA-205ENST00000490305 ESYT1Q9BSJ8 1104 aa16.06■□□□□ 0.16
HLA-DOA-205ENST00000490305 PODXL2Q9NZ53 605 aa16.06■□□□□ 0.16
HLA-DOA-205ENST00000490305 ATP6V0A2Q9Y487 856 aa16.06■□□□□ 0.16
HLA-DOA-205ENST00000490305 GOLIM4O00461 696 aa16.05■□□□□ 0.16
HLA-DOA-205ENST00000490305 ZBTB22O15209 634 aa16.05■□□□□ 0.16
HLA-DOA-205ENST00000490305 FKBP4Q02790 459 aaKnown RBP eCLIP16.05■□□□□ 0.16
HLA-DOA-205ENST00000490305 C15orf52Q6ZUT6 534 aaKnown RBP16.05■□□□□ 0.16
HLA-DOA-205ENST00000490305 KBTBD3Q8NAB2 608 aa16.05■□□□□ 0.16
HLA-DOA-205ENST00000490305 DLEC1Q9Y238 1755 aa16.05■□□□□ 0.16
HLA-DOA-205ENST00000490305 SNAP23O00161 211 aa16.04■□□□□ 0.16
HLA-DOA-205ENST00000490305 SEMA3EO15041 775 aa16.04■□□□□ 0.16
HLA-DOA-205ENST00000490305 EPB41L2O43491 1005 aaKnown RBP16.04■□□□□ 0.16
HLA-DOA-205ENST00000490305 ZBTB7AO95365 584 aa16.04■□□□□ 0.16
HLA-DOA-205ENST00000490305 MCAMP43121 646 aa16.04■□□□□ 0.16
HLA-DOA-205ENST00000490305 BCAMP50895 628 aa16.04■□□□□ 0.16
HLA-DOA-205ENST00000490305 GPSM2P81274 684 aa16.04■□□□□ 0.16
HLA-DOA-205ENST00000490305 VPS37DQ86XT2 251 aa16.04■□□□□ 0.16
HLA-DOA-205ENST00000490305 GGA1Q9UJY5 639 aa16.04■□□□□ 0.16
HLA-DOA-205ENST00000490305 CACNA1SQ13698 1873 aa16.03■□□□□ 0.16
HLA-DOA-205ENST00000490305 RAD50Q92878 1312 aa16.03■□□□□ 0.16
HLA-DOA-205ENST00000490305 ZAP70P43403 619 aa16.03■□□□□ 0.16
HLA-DOA-205ENST00000490305 FBXO33Q7Z6M2 555 aa16.03■□□□□ 0.16
HLA-DOA-205ENST00000490305 SPATA5Q8NB90 893 aa16.03■□□□□ 0.16
HLA-DOA-205ENST00000490305 NSFL1CQ9UNZ2 370 aaKnown RBP16.03■□□□□ 0.16
HLA-DOA-205ENST00000490305 MYH7P12883 1935 aa16.03■□□□□ 0.16
HLA-DOA-205ENST00000490305 MYH13Q9UKX3 1938 aa16.02■□□□□ 0.16
HLA-DOA-205ENST00000490305 ZFYP08048 801 aaPredicted RBP16.02■□□□□ 0.16
HLA-DOA-205ENST00000490305 HIBADHP31937 336 aaKnown RBP16.02■□□□□ 0.16
HLA-DOA-205ENST00000490305 GYG1P46976 350 aa16.02■□□□□ 0.16
HLA-DOA-205ENST00000490305 SCARF1Q14162 830 aa16.02■□□□□ 0.16
HLA-DOA-205ENST00000490305 ZSCAN25Q6NSZ9 544 aa16.02■□□□□ 0.16
HLA-DOA-205ENST00000490305 EDC3Q96F86 508 aaKnown RBP16.02■□□□□ 0.16
HLA-DOA-205ENST00000490305 FAM84BQ96KN1 310 aaPredicted RBP16.02■□□□□ 0.16
HLA-DOA-205ENST00000490305 TBC1D32Q96NH3 1257 aa16.02■□□□□ 0.16
HLA-DOA-205ENST00000490305 C22orf23Q9BZE7 217 aa16.02■□□□□ 0.16
HLA-DOA-205ENST00000490305 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.02■□□□□ 0.16
HLA-DOA-205ENST00000490305 SNRKQ9NRH2 765 aa16.02■□□□□ 0.16
HLA-DOA-205ENST00000490305 HMG20BQ9P0W2 317 aa16.02■□□□□ 0.16
HLA-DOA-205ENST00000490305 DENND2AQ9ULE3 1009 aa16.02■□□□□ 0.16
HLA-DOA-205ENST00000490305 ATF5Q9Y2D1 282 aaPredicted RBP16.02■□□□□ 0.16
HLA-DOA-205ENST00000490305 NDUFB9Q9Y6M9 179 aa16.02■□□□□ 0.16
HLA-DOA-205ENST00000490305 PDS5AQ29RF7 1337 aaKnown RBP16.01■□□□□ 0.15
HLA-DOA-205ENST00000490305 SGSM2O43147 1006 aa16.01■□□□□ 0.15
HLA-DOA-205ENST00000490305 UFL1O94874 794 aa16.01■□□□□ 0.15
HLA-DOA-205ENST00000490305 RASGRF1Q13972 1273 aa16.01■□□□□ 0.15
HLA-DOA-205ENST00000490305 CC2D2BQ6DHV5 1058 aa16.01■□□□□ 0.15
HLA-DOA-205ENST00000490305 CWC27Q6UX04 472 aaKnown RBP16.01■□□□□ 0.15
HLA-DOA-205ENST00000490305 KIAA1211Q6ZU35 1233 aa16.01■□□□□ 0.15
HLA-DOA-205ENST00000490305 MPNDQ8N594 471 aa16.01■□□□□ 0.15
HLA-DOA-205ENST00000490305 LTBP1Q14766 1721 aa16.01■□□□□ 0.15
HLA-DOA-205ENST00000490305 IRS2Q9Y4H2 1338 aa16■□□□□ 0.15
HLA-DOA-205ENST00000490305 CHRNA5P30532 468 aa16■□□□□ 0.15
HLA-DOA-205ENST00000490305 ANP32AP39687 249 aaKnown RBP16■□□□□ 0.15
HLA-DOA-205ENST00000490305 RBM25P49756 843 aaKnown RBP16■□□□□ 0.15
HLA-DOA-205ENST00000490305 TGFB2P61812 414 aa16■□□□□ 0.15
HLA-DOA-205ENST00000490305 GRIPAP1Q4V328 841 aa16■□□□□ 0.15
HLA-DOA-205ENST00000490305 PRPF40BQ6NWY9 871 aaKnown RBP16■□□□□ 0.15
HLA-DOA-205ENST00000490305 ZNF804AQ7Z570 1209 aa16■□□□□ 0.15
HLA-DOA-205ENST00000490305 TBC1D16Q8TBP0 767 aa16■□□□□ 0.15
HLA-DOA-205ENST00000490305 ANTXR1Q9H6X2 564 aa16■□□□□ 0.15
HLA-DOA-205ENST00000490305 SLX4Q8IY92 1834 aa16■□□□□ 0.15
HLA-DOA-205ENST00000490305 MED23Q9ULK4 1368 aa16■□□□□ 0.15
HLA-DOA-205ENST00000490305 DOCK2Q92608 1830 aa15.99■□□□□ 0.15
HLA-DOA-205ENST00000490305 RNF113AO15541 343 aaKnown RBP15.99■□□□□ 0.15
HLA-DOA-205ENST00000490305 FRAT2O75474 233 aaPredicted RBP15.99■□□□□ 0.15
HLA-DOA-205ENST00000490305 CYP2E1P05181 493 aaPredicted RBP15.99■□□□□ 0.15
HLA-DOA-205ENST00000490305 NMIQ13287 307 aaPredicted RBP15.99■□□□□ 0.15
HLA-DOA-205ENST00000490305 DPP8Q6V1X1 898 aaPredicted RBP15.99■□□□□ 0.15
HLA-DOA-205ENST00000490305 USP26Q9BXU7 913 aa15.99■□□□□ 0.15
HLA-DOA-205ENST00000490305 HELLSQ9NRZ9 838 aa15.99■□□□□ 0.15
HLA-DOA-205ENST00000490305 PSDA5PKW4 1024 aaPredicted RBP15.98■□□□□ 0.15
HLA-DOA-205ENST00000490305 WTIPA6NIX2 430 aaPredicted RBP15.98■□□□□ 0.15
HLA-DOA-205ENST00000490305 C6orf229H3BNL8 230 aa15.98■□□□□ 0.15
HLA-DOA-205ENST00000490305 IGSF3O75054 1194 aa15.98■□□□□ 0.15
HLA-DOA-205ENST00000490305 MCCP23508 829 aa15.98■□□□□ 0.15
HLA-DOA-205ENST00000490305 WASHC4Q2M389 1173 aa15.98■□□□□ 0.15
HLA-DOA-205ENST00000490305 MCMDC2Q4G0Z9 681 aa15.98■□□□□ 0.15
HLA-DOA-205ENST00000490305 PI16Q6UXB8 463 aa15.98■□□□□ 0.15
HLA-DOA-205ENST00000490305 TTLL6Q8N841 843 aa15.98■□□□□ 0.15
HLA-DOA-205ENST00000490305 EYA3Q99504 573 aa15.98■□□□□ 0.15
HLA-DOA-205ENST00000490305 ANO2Q9NQ90 1003 aa15.98■□□□□ 0.15
HLA-DOA-205ENST00000490305 KLRK1P26718 216 aa15.97■□□□□ 0.15
HLA-DOA-205ENST00000490305 MAP3K12Q12852 859 aa15.97■□□□□ 0.15
HLA-DOA-205ENST00000490305 ZMYM1Q5SVZ6 1142 aa15.97■□□□□ 0.15
HLA-DOA-205ENST00000490305 FAM227BQ96M60 508 aa15.97■□□□□ 0.15
HLA-DOA-205ENST00000490305 SGIP1Q9BQI5 828 aa15.97■□□□□ 0.15
HLA-DOA-205ENST00000490305 PIH1D3Q9NQM4 214 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms