RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 DCPSQ96C86 337 aaKnown RBP13.79□□□□□ -0.2
UBP1-211ENST00000490112 ABHD8Q96I13 439 aa13.79□□□□□ -0.2
UBP1-211ENST00000490112 ZNF408Q9H9D4 720 aa13.79□□□□□ -0.2
UBP1-211ENST00000490112 ANKIB1Q9P2G1 1089 aa13.79□□□□□ -0.2
UBP1-211ENST00000490112 FBXO3Q9UK99 471 aa13.79□□□□□ -0.2
UBP1-211ENST00000490112 APAF1O14727 1248 aa13.78□□□□□ -0.2
UBP1-211ENST00000490112 AOC2O75106 756 aa13.78□□□□□ -0.2
UBP1-211ENST00000490112 PCCAP05165 728 aaPredicted RBP13.78□□□□□ -0.2
UBP1-211ENST00000490112 CCDC30Q5VVM6 783 aa13.78□□□□□ -0.2
UBP1-211ENST00000490112 KRT26Q7Z3Y9 468 aa13.78□□□□□ -0.2
UBP1-211ENST00000490112 USP48Q86UV5 1035 aa13.78□□□□□ -0.2
UBP1-211ENST00000490112 SPNS2Q8IVW8 549 aa13.78□□□□□ -0.2
UBP1-211ENST00000490112 ZNF428Q96B54 188 aa13.78□□□□□ -0.2
UBP1-211ENST00000490112 CWC25Q9NXE8 425 aaPredicted RBP13.78□□□□□ -0.2
UBP1-211ENST00000490112 GGA1Q9UJY5 639 aa13.78□□□□□ -0.2
UBP1-211ENST00000490112 PDE8AO60658 829 aa13.77□□□□□ -0.21
UBP1-211ENST00000490112 VIL1P09327 827 aaKnown RBP13.77□□□□□ -0.21
UBP1-211ENST00000490112 HUNKP57058 714 aa13.77□□□□□ -0.21
UBP1-211ENST00000490112 SAMD7Q7Z3H4 446 aa13.77□□□□□ -0.21
UBP1-211ENST00000490112 C2orf69Q8N8R5 385 aa13.77□□□□□ -0.21
UBP1-211ENST00000490112 MYD88Q99836 296 aa13.77□□□□□ -0.21
UBP1-211ENST00000490112 PHAXQ9H814 394 aaKnown RBP13.77□□□□□ -0.21
UBP1-211ENST00000490112 UFL1O94874 794 aa13.76□□□□□ -0.21
UBP1-211ENST00000490112 DOK7Q18PE1 504 aa13.76□□□□□ -0.21
UBP1-211ENST00000490112 TBC1D10BQ4KMP7 808 aaPredicted RBP13.76□□□□□ -0.21
UBP1-211ENST00000490112 ZNF467Q7Z7K2 595 aaPredicted RBP13.76□□□□□ -0.21
UBP1-211ENST00000490112 AGBL3Q8NEM8 1001 aa13.76□□□□□ -0.21
UBP1-211ENST00000490112 CCDC102AQ96A19 550 aa13.76□□□□□ -0.21
UBP1-211ENST00000490112 METTL22Q9BUU2 404 aaPredicted RBP13.76□□□□□ -0.21
UBP1-211ENST00000490112 RTL9Q8NET4 1388 aa13.75□□□□□ -0.21
UBP1-211ENST00000490112 XDHP47989 1333 aa13.75□□□□□ -0.21
UBP1-211ENST00000490112 SHTN1A0MZ66 631 aa13.75□□□□□ -0.21
UBP1-211ENST00000490112 ELL2O00472 640 aaPredicted RBP13.75□□□□□ -0.21
UBP1-211ENST00000490112 ANKRD18AQ8IVF6 992 aa13.75□□□□□ -0.21
UBP1-211ENST00000490112 SULF1Q8IWU6 871 aa13.75□□□□□ -0.21
UBP1-211ENST00000490112 PDCD7Q8N8D1 485 aaKnown RBP13.75□□□□□ -0.21
UBP1-211ENST00000490112 GBA2Q9HCG7 927 aaPredicted RBP13.75□□□□□ -0.21
UBP1-211ENST00000490112 ZNF609O15014 1411 aa13.74□□□□□ -0.21
UBP1-211ENST00000490112 NEXNQ0ZGT2 675 aa13.74□□□□□ -0.21
UBP1-211ENST00000490112 KIF4BQ2VIQ3 1234 aa13.74□□□□□ -0.21
UBP1-211ENST00000490112 RBM26Q5T8P6 1007 aaKnown RBP13.74□□□□□ -0.21
UBP1-211ENST00000490112 RGMBQ6NW40 437 aa13.74□□□□□ -0.21
UBP1-211ENST00000490112 PODNQ7Z5L7 613 aa13.74□□□□□ -0.21
UBP1-211ENST00000490112 C8orf58Q8NAV2 365 aa13.74□□□□□ -0.21
UBP1-211ENST00000490112 MARVELD3Q96A59 401 aa13.74□□□□□ -0.21
UBP1-211ENST00000490112 CDC5LQ99459 802 aaKnown RBP13.74□□□□□ -0.21
UBP1-211ENST00000490112 SEC31BQ9NQW1 1179 aa13.74□□□□□ -0.21
UBP1-211ENST00000490112 KCNQ5Q9NR82 932 aa13.74□□□□□ -0.21
UBP1-211ENST00000490112 ATP2B4P23634 1241 aa13.73□□□□□ -0.21
UBP1-211ENST00000490112 GSE1Q14687 1217 aa13.73□□□□□ -0.21
UBP1-211ENST00000490112 RSBN1LQ6PCB5 846 aaPredicted RBP13.73□□□□□ -0.21
UBP1-211ENST00000490112 KSR2Q6VAB6 950 aa13.73□□□□□ -0.21
UBP1-211ENST00000490112 STK31Q9BXU1 1019 aa13.73□□□□□ -0.21
UBP1-211ENST00000490112 SAGE1Q9NXZ1 904 aa13.73□□□□□ -0.21
UBP1-211ENST00000490112 EGFRP00533 1210 aa13.72□□□□□ -0.21
UBP1-211ENST00000490112 MMP14P50281 582 aa13.72□□□□□ -0.21
UBP1-211ENST00000490112 ZNF157P51786 506 aaPredicted RBP13.72□□□□□ -0.21
UBP1-211ENST00000490112 ZNF280AP59817 542 aaPredicted RBP13.72□□□□□ -0.21
UBP1-211ENST00000490112 TSKSQ9UJT2 592 aa13.72□□□□□ -0.21
UBP1-211ENST00000490112 MAP3K2Q9Y2U5 619 aa13.72□□□□□ -0.21
UBP1-211ENST00000490112 POLR2AP24928 1970 aaKnown RBP13.72□□□□□ -0.21
UBP1-211ENST00000490112 USP17L3A6NCW0 530 aa13.71□□□□□ -0.21
UBP1-211ENST00000490112 USP17L4A6NCW7 530 aa13.71□□□□□ -0.21
UBP1-211ENST00000490112 CCDC85CA6NKD9 419 aa13.71□□□□□ -0.21
UBP1-211ENST00000490112 USP17L8P0C7I0 530 aa13.71□□□□□ -0.21
UBP1-211ENST00000490112 CTSWP56202 376 aa13.71□□□□□ -0.21
UBP1-211ENST00000490112 FKBP1BP68106 108 aa13.71□□□□□ -0.21
UBP1-211ENST00000490112 MKRN3Q13064 507 aaKnown RBP13.71□□□□□ -0.21
UBP1-211ENST00000490112 CCDC27Q2M243 656 aa13.71□□□□□ -0.21
UBP1-211ENST00000490112 USP17L1Q7RTZ2 530 aa13.71□□□□□ -0.21
UBP1-211ENST00000490112 BSDC1Q9NW68 430 aaPredicted RBP13.71□□□□□ -0.21
UBP1-211ENST00000490112 GGA3Q9NZ52 723 aa13.71□□□□□ -0.21
UBP1-211ENST00000490112 PITPNM2Q9BZ72 1349 aa13.7□□□□□ -0.22
UBP1-211ENST00000490112 COL4A1P02462 1669 aa13.7□□□□□ -0.22
UBP1-211ENST00000490112 PI4KAP2A4QPH2 592 aa13.7□□□□□ -0.22
UBP1-211ENST00000490112 ADM5C9JUS6 153 aa13.7□□□□□ -0.22
UBP1-211ENST00000490112 SCARF1Q14162 830 aa13.7□□□□□ -0.22
UBP1-211ENST00000490112 PI4KAP1Q8N8J0 262 aa13.7□□□□□ -0.22
UBP1-211ENST00000490112 SCN9AQ15858 1988 aa13.7□□□□□ -0.22
UBP1-211ENST00000490112 PSME4Q14997 1843 aa13.69□□□□□ -0.22
UBP1-211ENST00000490112 FAM155AB1AL88 458 aaPredicted RBP13.69□□□□□ -0.22
UBP1-211ENST00000490112 RGS19P49795 217 aa13.69□□□□□ -0.22
UBP1-211ENST00000490112 OGFOD1Q8N543 542 aa13.69□□□□□ -0.22
UBP1-211ENST00000490112 TTLL11Q8NHH1 800 aa13.69□□□□□ -0.22
UBP1-211ENST00000490112 CDCA5Q96FF9 252 aa13.69□□□□□ -0.22
UBP1-211ENST00000490112 CCDC85AQ96PX6 553 aaPredicted RBP13.69□□□□□ -0.22
UBP1-211ENST00000490112 GMLQ99445 158 aa13.69□□□□□ -0.22
UBP1-211ENST00000490112 MCOLN1Q9GZU1 580 aa13.69□□□□□ -0.22
UBP1-211ENST00000490112 MYOZ2Q9NPC6 264 aa13.69□□□□□ -0.22
UBP1-211ENST00000490112 MED23Q9ULK4 1368 aa13.69□□□□□ -0.22
UBP1-211ENST00000490112 MYO3BQ8WXR4 1341 aa13.68□□□□□ -0.22
UBP1-211ENST00000490112 IGKV5-2P06315 115 aa13.68□□□□□ -0.22
UBP1-211ENST00000490112 MLLT1Q03111 559 aaPredicted RBP13.68□□□□□ -0.22
UBP1-211ENST00000490112 DGKZQ13574 1117 aa13.68□□□□□ -0.22
UBP1-211ENST00000490112 ANGEL2Q5VTE6 544 aaKnown RBP13.68□□□□□ -0.22
UBP1-211ENST00000490112 DLK2Q6UY11 383 aa13.68□□□□□ -0.22
UBP1-211ENST00000490112 JARID2Q92833 1246 aaPredicted RBP13.68□□□□□ -0.22
UBP1-211ENST00000490112 LEMD3Q9Y2U8 911 aa13.68□□□□□ -0.22
UBP1-211ENST00000490112 CASP8AP2Q9UKL3 1982 aa13.68□□□□□ -0.22
UBP1-211ENST00000490112 MYH3P11055 1940 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms