RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 C21orf2O43822 256 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 EVI5O60447 810 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 TATP17735 454 aaPredicted RBP5.78□□□□□ -1.48
RTN1-207ENST00000490111 FBLN1P23142 703 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 FMR1Q06787 632 aaKnown RBP eCLIP5.78□□□□□ -1.48
RTN1-207ENST00000490111 NEUROD1Q13562 356 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 PLEKHG6Q3KR16 790 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 CTU1Q7Z7A3 348 aaKnown RBP5.78□□□□□ -1.48
RTN1-207ENST00000490111 SMG6Q86US8 1419 aaKnown RBP5.78□□□□□ -1.48
RTN1-207ENST00000490111 NME9Q86XW9 330 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 C2CD5Q86YS7 1000 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 MICALL2Q8IY33 904 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 NFATC2IPQ8NCF5 419 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 RAPGEF4Q8WZA2 1011 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 L3MBTL2Q969R5 705 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 TAOK3Q9H2K8 898 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 TUT1Q9H6E5 874 aaKnown RBP5.78□□□□□ -1.48
RTN1-207ENST00000490111 CCSER2Q9H7U1 834 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 CAPN10Q9HC96 672 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 SRP68Q9UHB9 627 aaKnown RBP5.78□□□□□ -1.48
RTN1-207ENST00000490111 DCTN4Q9UJW0 460 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 ASAP1Q9ULH1 1129 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 COL4A3BPQ9Y5P4 624 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 RGPD2P0DJD1 1756 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 FER1L6Q2WGJ9 1857 aa5.77□□□□□ -1.49
RTN1-207ENST00000490111 H0YIN7 160 aa5.77□□□□□ -1.49
RTN1-207ENST00000490111 CYP27B1O15528 508 aa5.77□□□□□ -1.49
RTN1-207ENST00000490111 CREB3O43889 395 aa5.77□□□□□ -1.49
RTN1-207ENST00000490111 ICMTO60725 284 aa5.77□□□□□ -1.49
RTN1-207ENST00000490111 HSD3B2P26439 372 aa5.77□□□□□ -1.49
RTN1-207ENST00000490111 CTDSPL2Q05D32 466 aa5.77□□□□□ -1.49
RTN1-207ENST00000490111 PTK7Q13308 1070 aa5.77□□□□□ -1.49
RTN1-207ENST00000490111 ZNF211Q13398 564 aaPredicted RBP5.77□□□□□ -1.49
RTN1-207ENST00000490111 SAPCD2Q86UD0 394 aa5.77□□□□□ -1.49
RTN1-207ENST00000490111 NUTM1Q86Y26 1132 aa5.77□□□□□ -1.49
RTN1-207ENST00000490111 ZSCAN29Q8IWY8 852 aaPredicted RBP5.77□□□□□ -1.49
RTN1-207ENST00000490111 NME8Q8N427 588 aa5.77□□□□□ -1.49
RTN1-207ENST00000490111 HHIPL1Q96JK4 782 aa5.77□□□□□ -1.49
RTN1-207ENST00000490111 SAGE1Q9NXZ1 904 aa5.77□□□□□ -1.49
RTN1-207ENST00000490111 TMOD3Q9NYL9 352 aa5.77□□□□□ -1.49
RTN1-207ENST00000490111 DMGDHQ9UI17 866 aaKnown RBP5.77□□□□□ -1.49
RTN1-207ENST00000490111 LAS1LQ9Y4W2 734 aaKnown RBP5.77□□□□□ -1.49
RTN1-207ENST00000490111 MAP3K19Q56UN5 1328 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 CNTNAP4Q9C0A0 1308 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 USP42Q9H9J4 1324 aaKnown RBP5.76□□□□□ -1.49
RTN1-207ENST00000490111 TRAF5O00463 557 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 MAP3K7O43318 606 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 FANCCQ00597 558 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 PKN2Q16513 984 aaKnown RBP5.76□□□□□ -1.49
RTN1-207ENST00000490111 ECM1Q16610 540 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 AKAP4Q5JQC9 854 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 RNF187Q5TA31 235 aaPredicted RBP5.76□□□□□ -1.49
RTN1-207ENST00000490111 NBPF6Q5VWK0 638 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 RPUSD2Q8IZ73 545 aaKnown RBP5.76□□□□□ -1.49
RTN1-207ENST00000490111 RGL4Q8IZJ4 473 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 TMTC2Q8N394 836 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 USHBP1Q8N6Y0 703 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 FAM200AQ8TCP9 573 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 EPS8L1Q8TE68 723 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 NBPF4Q96M43 638 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 IRF2BPLQ9H1B7 796 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 OSBPL2Q9H1P3 480 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 ZBTB3Q9H5J0 574 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 PCDH12Q9NPG4 1184 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 METTL5Q9NRN9 209 aaKnown RBP5.76□□□□□ -1.49
RTN1-207ENST00000490111 ATG3Q9NT62 314 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 GABBR1Q9UBS5 961 aa5.76□□□□□ -1.49
RTN1-207ENST00000490111 RNF123Q5XPI4 1314 aa5.75□□□□□ -1.49
RTN1-207ENST00000490111 EVC2Q86UK5 1308 aa5.75□□□□□ -1.49
RTN1-207ENST00000490111 TRPM7Q96QT4 1865 aa5.75□□□□□ -1.49
RTN1-207ENST00000490111 USP17L5A8MUK1 530 aa5.75□□□□□ -1.49
RTN1-207ENST00000490111 P4HBP07237 508 aaKnown RBP5.75□□□□□ -1.49
RTN1-207ENST00000490111 HOXC9P31274 260 aa5.75□□□□□ -1.49
RTN1-207ENST00000490111 EIF4G2P78344 907 aaKnown RBP eCLIP5.75□□□□□ -1.49
RTN1-207ENST00000490111 NOGQ13253 232 aa5.75□□□□□ -1.49
RTN1-207ENST00000490111 SWI5Q1ZZU3 235 aa5.75□□□□□ -1.49
RTN1-207ENST00000490111 PPP1R18Q6NYC8 613 aa5.75□□□□□ -1.49
RTN1-207ENST00000490111 PADI6Q6TGC4 694 aa5.75□□□□□ -1.49
RTN1-207ENST00000490111 GLYCTKQ8IVS8 523 aa5.75□□□□□ -1.49
RTN1-207ENST00000490111 LRRN4Q8WUT4 740 aa5.75□□□□□ -1.49
RTN1-207ENST00000490111 ZNF622Q969S3 477 aaKnown RBP eCLIP5.75□□□□□ -1.49
RTN1-207ENST00000490111 CCDC136Q96JN2 1154 aa5.75□□□□□ -1.49
RTN1-207ENST00000490111 SLC4A9Q96Q91 983 aa5.75□□□□□ -1.49
RTN1-207ENST00000490111 ZIC5Q96T25 663 aa5.75□□□□□ -1.49
RTN1-207ENST00000490111 EPAS1Q99814 870 aa5.75□□□□□ -1.49
RTN1-207ENST00000490111 ACBD3Q9H3P7 528 aa5.75□□□□□ -1.49
RTN1-207ENST00000490111 INSRP06213 1382 aa5.75□□□□□ -1.49
RTN1-207ENST00000490111 ZNF831Q5JPB2 1677 aa5.75□□□□□ -1.49
RTN1-207ENST00000490111 ZNF541Q9H0D2 1346 aa5.74□□□□□ -1.49
RTN1-207ENST00000490111 COL5A3P25940 1745 aaPredicted RBP5.74□□□□□ -1.49
RTN1-207ENST00000490111 MON2Q7Z3U7 1717 aa5.74□□□□□ -1.49
RTN1-207ENST00000490111 HMGB1P1B2RPK0 211 aaPredicted RBP5.74□□□□□ -1.49
RTN1-207ENST00000490111 TRPA1O75762 1119 aa5.74□□□□□ -1.49
RTN1-207ENST00000490111 ABL1P00519 1130 aa5.74□□□□□ -1.49
RTN1-207ENST00000490111 SERPINB2P05120 415 aa5.74□□□□□ -1.49
RTN1-207ENST00000490111 AMPHP49418 695 aa5.74□□□□□ -1.49
RTN1-207ENST00000490111 FOXD4L6Q3SYB3 417 aaPredicted RBP5.74□□□□□ -1.49
RTN1-207ENST00000490111 SOGA3Q5TF21 947 aa5.74□□□□□ -1.49
RTN1-207ENST00000490111 FOXD4L3Q6VB84 417 aaPredicted RBP5.74□□□□□ -1.49
RTN1-207ENST00000490111 BICDL1Q6ZP65 573 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms