RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 ICMTO60725 284 aa7.64□□□□□ -1.19
HMGN1-218ENST00000490032 NOS3P29474 1203 aa7.64□□□□□ -1.19
HMGN1-218ENST00000490032 AAMPQ13685 434 aa7.64□□□□□ -1.19
HMGN1-218ENST00000490032 POP1Q99575 1024 aaKnown RBP7.64□□□□□ -1.19
HMGN1-218ENST00000490032 LACRTQ9GZZ8 138 aa7.64□□□□□ -1.19
HMGN1-218ENST00000490032 MRPL18Q9H0U6 180 aaKnown RBP7.64□□□□□ -1.19
HMGN1-218ENST00000490032 ANO2Q9NQ90 1003 aa7.64□□□□□ -1.19
HMGN1-218ENST00000490032 TNFRSF21O75509 655 aa7.63□□□□□ -1.19
HMGN1-218ENST00000490032 IREB2P48200 963 aaKnown RBP7.63□□□□□ -1.19
HMGN1-218ENST00000490032 ECM1Q16610 540 aa7.63□□□□□ -1.19
HMGN1-218ENST00000490032 RETREG2Q8NC44 543 aa7.63□□□□□ -1.19
HMGN1-218ENST00000490032 SNX29Q8TEQ0 813 aa7.63□□□□□ -1.19
HMGN1-218ENST00000490032 CCDC87Q9NVE4 849 aa7.63□□□□□ -1.19
HMGN1-218ENST00000490032 DZANK1Q9NVP4 752 aa7.63□□□□□ -1.19
HMGN1-218ENST00000490032 LINC01387J3KSC0 135 aa7.62□□□□□ -1.19
HMGN1-218ENST00000490032 ACPPP15309 386 aa7.62□□□□□ -1.19
HMGN1-218ENST00000490032 PTPRAP18433 802 aa7.62□□□□□ -1.19
HMGN1-218ENST00000490032 SERPINB4P48594 390 aa7.62□□□□□ -1.19
HMGN1-218ENST00000490032 GALNT11Q8NCW6 608 aa7.62□□□□□ -1.19
HMGN1-218ENST00000490032 AKTIPQ9H8T0 292 aa7.62□□□□□ -1.19
HMGN1-218ENST00000490032 F8W735 103 aaPredicted RBP7.61□□□□□ -1.19
HMGN1-218ENST00000490032 EREGO14944 169 aa7.61□□□□□ -1.19
HMGN1-218ENST00000490032 PHACTR2O75167 634 aa7.61□□□□□ -1.19
HMGN1-218ENST00000490032 EPHA1P21709 976 aa7.61□□□□□ -1.19
HMGN1-218ENST00000490032 PDE4CQ08493 712 aa7.61□□□□□ -1.19
HMGN1-218ENST00000490032 Q6ZS46 218 aa7.61□□□□□ -1.19
HMGN1-218ENST00000490032 TXNDC2Q86VQ3 553 aa7.61□□□□□ -1.19
HMGN1-218ENST00000490032 TP53INP1Q96A56 240 aa7.61□□□□□ -1.19
HMGN1-218ENST00000490032 MEGF10Q96KG7 1140 aa7.61□□□□□ -1.19
HMGN1-218ENST00000490032 FOXD3Q9UJU5 478 aaPredicted RBP7.61□□□□□ -1.19
HMGN1-218ENST00000490032 FSCN2O14926 492 aa7.6□□□□□ -1.19
HMGN1-218ENST00000490032 DZIP1LQ8IYY4 767 aaKnown RBP7.6□□□□□ -1.19
HMGN1-218ENST00000490032 TMEM102Q8N9M5 508 aaPredicted RBP7.6□□□□□ -1.19
HMGN1-218ENST00000490032 SH2B1Q9NRF2 756 aaPredicted RBP7.6□□□□□ -1.19
HMGN1-218ENST00000490032 H3BRB1 525 aa7.59□□□□□ -1.19
HMGN1-218ENST00000490032 PDE2AO00408 941 aaPredicted RBP7.59□□□□□ -1.19
HMGN1-218ENST00000490032 CD68P34810 354 aaPredicted RBP7.59□□□□□ -1.19
HMGN1-218ENST00000490032 ARHGAP4P98171 946 aa7.59□□□□□ -1.19
HMGN1-218ENST00000490032 FOXD4L6Q3SYB3 417 aaPredicted RBP7.59□□□□□ -1.19
HMGN1-218ENST00000490032 FAM117BQ6P1L5 589 aa7.59□□□□□ -1.19
HMGN1-218ENST00000490032 TXNDC11Q6PKC3 985 aa7.59□□□□□ -1.19
HMGN1-218ENST00000490032 FOXD4L3Q6VB84 417 aaPredicted RBP7.59□□□□□ -1.19
HMGN1-218ENST00000490032 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.59□□□□□ -1.19
HMGN1-218ENST00000490032 GLYCTKQ8IVS8 523 aa7.59□□□□□ -1.19
HMGN1-218ENST00000490032 KLHL23Q8NBE8 558 aa7.59□□□□□ -1.19
HMGN1-218ENST00000490032 WNT8BQ93098 351 aa7.59□□□□□ -1.19
HMGN1-218ENST00000490032 TUT1Q9H6E5 874 aaKnown RBP7.59□□□□□ -1.19
HMGN1-218ENST00000490032 H3BRJ5 948 aa7.58□□□□□ -1.2
HMGN1-218ENST00000490032 TRPA1O75762 1119 aa7.58□□□□□ -1.2
HMGN1-218ENST00000490032 ALX3O95076 343 aa7.58□□□□□ -1.2
HMGN1-218ENST00000490032 EDN3P14138 238 aa7.58□□□□□ -1.2
HMGN1-218ENST00000490032 PRSS36Q5K4E3 855 aa7.58□□□□□ -1.2
HMGN1-218ENST00000490032 NXPE3Q969Y0 559 aa7.58□□□□□ -1.2
HMGN1-218ENST00000490032 HHIPQ96QV1 700 aa7.58□□□□□ -1.2
HMGN1-218ENST00000490032 OSMRQ99650 979 aa7.58□□□□□ -1.2
HMGN1-218ENST00000490032 ZKSCAN3Q9BRR0 538 aa7.58□□□□□ -1.2
HMGN1-218ENST00000490032 ZFYVE28Q9HCC9 887 aa7.58□□□□□ -1.2
HMGN1-218ENST00000490032 KCNK4Q9NYG8 393 aa7.58□□□□□ -1.2
HMGN1-218ENST00000490032 SOX13Q9UN79 622 aa7.58□□□□□ -1.2
HMGN1-218ENST00000490032 FAM177BA6PVY3 158 aa7.57□□□□□ -1.2
HMGN1-218ENST00000490032 CABP4P57796 275 aa7.57□□□□□ -1.2
HMGN1-218ENST00000490032 PIP4K2BP78356 416 aa7.57□□□□□ -1.2
HMGN1-218ENST00000490032 CARD10Q9BWT7 1032 aa7.57□□□□□ -1.2
HMGN1-218ENST00000490032 OSGEPQ9NPF4 335 aa7.57□□□□□ -1.2
HMGN1-218ENST00000490032 SEC31BQ9NQW1 1179 aa7.57□□□□□ -1.2
HMGN1-218ENST00000490032 AMOTL2Q9Y2J4 779 aa7.57□□□□□ -1.2
HMGN1-218ENST00000490032 WISP1O95388 367 aa7.56□□□□□ -1.2
HMGN1-218ENST00000490032 CDC25BP30305 580 aa7.56□□□□□ -1.2
HMGN1-218ENST00000490032 PEAR1Q5VY43 1037 aaPredicted RBP7.56□□□□□ -1.2
HMGN1-218ENST00000490032 KLHDC7BQ96G42 594 aa7.56□□□□□ -1.2
HMGN1-218ENST00000490032 BHLHE41Q9C0J9 482 aaPredicted RBP7.56□□□□□ -1.2
HMGN1-218ENST00000490032 BRPF3Q9ULD4 1205 aa7.56□□□□□ -1.2
HMGN1-218ENST00000490032 ADAM11O75078 769 aa7.55□□□□□ -1.2
HMGN1-218ENST00000490032 AGGF1Q8N302 714 aaeCLIP7.55□□□□□ -1.2
HMGN1-218ENST00000490032 FOXD4L4Q8WXT5 416 aaPredicted RBP7.55□□□□□ -1.2
HMGN1-218ENST00000490032 BSNDQ8WZ55 320 aa7.55□□□□□ -1.2
HMGN1-218ENST00000490032 CITED4Q96RK1 184 aa7.55□□□□□ -1.2
HMGN1-218ENST00000490032 FAM129BQ96TA1 746 aa7.55□□□□□ -1.2
HMGN1-218ENST00000490032 ZMYM1Q5SVZ6 1142 aa7.54□□□□□ -1.2
HMGN1-218ENST00000490032 PRR23CQ6ZRP0 262 aa7.54□□□□□ -1.2
HMGN1-218ENST00000490032 KIAA1211Q6ZU35 1233 aa7.54□□□□□ -1.2
HMGN1-218ENST00000490032 ACAD11Q709F0 780 aa7.54□□□□□ -1.2
HMGN1-218ENST00000490032 Q8N3U1 123 aa7.54□□□□□ -1.2
HMGN1-218ENST00000490032 CCER1Q8TC90 406 aaPredicted RBP7.54□□□□□ -1.2
HMGN1-218ENST00000490032 LATS2Q9NRM7 1088 aa7.54□□□□□ -1.2
HMGN1-218ENST00000490032 NDUFB5O43674 189 aa7.53□□□□□ -1.2
HMGN1-218ENST00000490032 DUOXA2Q1HG44 320 aa7.53□□□□□ -1.2
HMGN1-218ENST00000490032 VN1R5Q7Z5H4 357 aa7.53□□□□□ -1.2
HMGN1-218ENST00000490032 GALNT12Q8IXK2 581 aa7.53□□□□□ -1.2
HMGN1-218ENST00000490032 DDX3YO15523 660 aaKnown RBP7.52□□□□□ -1.21
HMGN1-218ENST00000490032 IGHA2P01877 340 aa7.52□□□□□ -1.21
HMGN1-218ENST00000490032 NEFLP07196 543 aa7.52□□□□□ -1.21
HMGN1-218ENST00000490032 GLB1P16278 677 aa7.52□□□□□ -1.21
HMGN1-218ENST00000490032 PDE3BQ13370 1112 aa7.52□□□□□ -1.21
HMGN1-218ENST00000490032 XP32Q5T750 250 aa7.52□□□□□ -1.21
HMGN1-218ENST00000490032 UBL7Q96S82 380 aaPredicted RBP7.52□□□□□ -1.21
HMGN1-218ENST00000490032 GNEQ9Y223 722 aaKnown RBP7.52□□□□□ -1.21
HMGN1-218ENST00000490032 SOX1O00570 391 aaPredicted RBP7.51□□□□□ -1.21
HMGN1-218ENST00000490032 POLR3DP05423 398 aaPredicted RBP7.51□□□□□ -1.21
HMGN1-218ENST00000490032 C19orf57Q0VDD7 668 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms