RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 ZNF804AQ7Z570 1209 aa13.45□□□□□ -0.26
VPS13D-210ENST00000489961 ERC1Q8IUD2 1116 aa13.45□□□□□ -0.26
VPS13D-210ENST00000489961 EXOC6Q8TAG9 804 aa13.45□□□□□ -0.26
VPS13D-210ENST00000489961 COA1Q9GZY4 146 aa13.45□□□□□ -0.26
VPS13D-210ENST00000489961 AKAP2Q9Y2D5 859 aa13.45□□□□□ -0.26
VPS13D-210ENST00000489961 FGFR2P21802 821 aa13.44□□□□□ -0.26
VPS13D-210ENST00000489961 KLRK1P26718 216 aa13.44□□□□□ -0.26
VPS13D-210ENST00000489961 IRX6P78412 446 aaPredicted RBP13.44□□□□□ -0.26
VPS13D-210ENST00000489961 TFCP2Q12800 502 aa13.44□□□□□ -0.26
VPS13D-210ENST00000489961 CAVIN4Q5BKX8 364 aa13.44□□□□□ -0.26
VPS13D-210ENST00000489961 PODNQ7Z5L7 613 aa13.44□□□□□ -0.26
VPS13D-210ENST00000489961 TXNRD3Q86VQ6 643 aa13.44□□□□□ -0.26
VPS13D-210ENST00000489961 LPIN2Q92539 896 aa13.44□□□□□ -0.26
VPS13D-210ENST00000489961 EXOC6BQ9Y2D4 811 aa13.44□□□□□ -0.26
VPS13D-210ENST00000489961 KDM2BQ8NHM5 1336 aa13.43□□□□□ -0.26
VPS13D-210ENST00000489961 ZNF541Q9H0D2 1346 aa13.43□□□□□ -0.26
VPS13D-210ENST00000489961 IRS2Q9Y4H2 1338 aa13.43□□□□□ -0.26
VPS13D-210ENST00000489961 GLTPD2A6NH11 291 aa13.43□□□□□ -0.26
VPS13D-210ENST00000489961 SASH1O94885 1247 aa13.43□□□□□ -0.26
VPS13D-210ENST00000489961 TNIP1Q15025 636 aa13.43□□□□□ -0.26
VPS13D-210ENST00000489961 CIAPIN1Q6FI81 312 aa13.43□□□□□ -0.26
VPS13D-210ENST00000489961 VPS37DQ86XT2 251 aa13.43□□□□□ -0.26
VPS13D-210ENST00000489961 ARAP2Q8WZ64 1704 aa13.43□□□□□ -0.26
VPS13D-210ENST00000489961 PCDHB15Q9Y5E8 787 aa13.43□□□□□ -0.26
VPS13D-210ENST00000489961 PSME4Q14997 1843 aa13.43□□□□□ -0.26
VPS13D-210ENST00000489961 YDJCA8MPS7 323 aa13.42□□□□□ -0.26
VPS13D-210ENST00000489961 RAB11FIP3O75154 756 aa13.42□□□□□ -0.26
VPS13D-210ENST00000489961 HIBADHP31937 336 aaKnown RBP13.42□□□□□ -0.26
VPS13D-210ENST00000489961 CXCL9Q07325 125 aa13.42□□□□□ -0.26
VPS13D-210ENST00000489961 GPC2Q8N158 579 aa13.42□□□□□ -0.26
VPS13D-210ENST00000489961 CD209Q9NNX6 404 aa13.42□□□□□ -0.26
VPS13D-210ENST00000489961 GJA3Q9Y6H8 435 aa13.42□□□□□ -0.26
VPS13D-210ENST00000489961 A0A1B0GUL7 405 aa13.41□□□□□ -0.26
VPS13D-210ENST00000489961 RAD17O75943 681 aa13.41□□□□□ -0.26
VPS13D-210ENST00000489961 DDNO94850 711 aaPredicted RBP13.41□□□□□ -0.26
VPS13D-210ENST00000489961 GYG1P46976 350 aa13.41□□□□□ -0.26
VPS13D-210ENST00000489961 ZNF526Q8TF50 670 aaPredicted RBP13.41□□□□□ -0.26
VPS13D-210ENST00000489961 KIF1BPQ96EK5 621 aa13.41□□□□□ -0.26
VPS13D-210ENST00000489961 FAM84BQ96KN1 310 aaPredicted RBP13.41□□□□□ -0.26
VPS13D-210ENST00000489961 GPR108Q9NPR9 543 aa13.41□□□□□ -0.26
VPS13D-210ENST00000489961 SCN9AQ15858 1988 aa13.41□□□□□ -0.26
VPS13D-210ENST00000489961 ZNF609O15014 1411 aa13.4□□□□□ -0.26
VPS13D-210ENST00000489961 UTRNP46939 3433 aa13.4□□□□□ -0.26
VPS13D-210ENST00000489961 WDR90Q96KV7 1748 aa13.4□□□□□ -0.26
VPS13D-210ENST00000489961 USP17L3A6NCW0 530 aa13.4□□□□□ -0.26
VPS13D-210ENST00000489961 USP17L4A6NCW7 530 aa13.4□□□□□ -0.26
VPS13D-210ENST00000489961 APBB1O00213 710 aa13.4□□□□□ -0.26
VPS13D-210ENST00000489961 IL1R1P14778 569 aa13.4□□□□□ -0.26
VPS13D-210ENST00000489961 TIMM10P62072 90 aa13.4□□□□□ -0.26
VPS13D-210ENST00000489961 USP17L1Q7RTZ2 530 aa13.4□□□□□ -0.26
VPS13D-210ENST00000489961 FBXO33Q7Z6M2 555 aa13.4□□□□□ -0.26
VPS13D-210ENST00000489961 RHPN1Q8TCX5 695 aa13.4□□□□□ -0.26
VPS13D-210ENST00000489961 FBXW7Q969H0 707 aa13.4□□□□□ -0.26
VPS13D-210ENST00000489961 NEUROD6Q96NK8 337 aa13.4□□□□□ -0.26
VPS13D-210ENST00000489961 MYH13Q9UKX3 1938 aa13.4□□□□□ -0.26
VPS13D-210ENST00000489961 PSMD14O00487 310 aa13.39□□□□□ -0.27
VPS13D-210ENST00000489961 FRAT2O75474 233 aaPredicted RBP13.39□□□□□ -0.27
VPS13D-210ENST00000489961 NEFLP07196 543 aa13.39□□□□□ -0.27
VPS13D-210ENST00000489961 TNNI3KQ59H18 835 aa13.39□□□□□ -0.27
VPS13D-210ENST00000489961 GORABQ5T7V8 394 aa13.39□□□□□ -0.27
VPS13D-210ENST00000489961 DCTPP1Q9H773 170 aa13.39□□□□□ -0.27
VPS13D-210ENST00000489961 GPBP1L1Q9HC44 474 aaPredicted RBP13.39□□□□□ -0.27
VPS13D-210ENST00000489961 KCNQ5Q9NR82 932 aa13.39□□□□□ -0.27
VPS13D-210ENST00000489961 GNL3LQ9NVN8 582 aaKnown RBP13.39□□□□□ -0.27
VPS13D-210ENST00000489961 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.39□□□□□ -0.27
VPS13D-210ENST00000489961 FPGT-TNNI3KV9GXZ4 949 aa13.39□□□□□ -0.27
VPS13D-210ENST00000489961 VIL1P09327 827 aaKnown RBP13.38□□□□□ -0.27
VPS13D-210ENST00000489961 BCAMP50895 628 aa13.38□□□□□ -0.27
VPS13D-210ENST00000489961 GTF2IP78347 998 aa13.38□□□□□ -0.27
VPS13D-210ENST00000489961 HDAC1Q13547 482 aaPredicted RBP13.38□□□□□ -0.27
VPS13D-210ENST00000489961 STRIP1Q5VSL9 837 aa13.38□□□□□ -0.27
VPS13D-210ENST00000489961 TTLL5Q6EMB2 1281 aa13.38□□□□□ -0.27
VPS13D-210ENST00000489961 CLASRPQ8N2M8 674 aaKnown RBP13.38□□□□□ -0.27
VPS13D-210ENST00000489961 ZNF784Q8NCA9 323 aaPredicted RBP13.38□□□□□ -0.27
VPS13D-210ENST00000489961 TDRD7Q8NHU6 1098 aaKnown RBP13.38□□□□□ -0.27
VPS13D-210ENST00000489961 XAGE2Q96GT9 111 aa13.38□□□□□ -0.27
VPS13D-210ENST00000489961 L3MBTL3Q96JM7 780 aaPredicted RBP13.38□□□□□ -0.27
VPS13D-210ENST00000489961 RWDD1Q9H446 243 aaPredicted RBP13.38□□□□□ -0.27
VPS13D-210ENST00000489961 SCN4AP35499 1836 aa13.38□□□□□ -0.27
VPS13D-210ENST00000489961 IQCA1LA6NCM1 817 aa13.37□□□□□ -0.27
VPS13D-210ENST00000489961 RPS12P25398 132 aaKnown RBP13.37□□□□□ -0.27
VPS13D-210ENST00000489961 LMOD1P29536 600 aaPredicted RBP13.37□□□□□ -0.27
VPS13D-210ENST00000489961 ADORA1P30542 326 aa13.37□□□□□ -0.27
VPS13D-210ENST00000489961 RSBN1LQ6PCB5 846 aaPredicted RBP13.37□□□□□ -0.27
VPS13D-210ENST00000489961 LRRCC1Q9C099 1032 aa13.37□□□□□ -0.27
VPS13D-210ENST00000489961 IL1RAPL2Q9NP60 686 aa13.37□□□□□ -0.27
VPS13D-210ENST00000489961 MYO3BQ8WXR4 1341 aa13.37□□□□□ -0.27
VPS13D-210ENST00000489961 ZNF646O15015 1829 aaPredicted RBP13.36□□□□□ -0.27
VPS13D-210ENST00000489961 SEMA3EO15041 775 aa13.36□□□□□ -0.27
VPS13D-210ENST00000489961 VEGFAP15692 232 aaPredicted RBP13.36□□□□□ -0.27
VPS13D-210ENST00000489961 PHKA1P46020 1223 aa13.36□□□□□ -0.27
VPS13D-210ENST00000489961 GMPSP49915 693 aaPredicted RBP13.36□□□□□ -0.27
VPS13D-210ENST00000489961 DACT2Q5SW24 774 aa13.36□□□□□ -0.27
VPS13D-210ENST00000489961 CCDC102BQ68D86 513 aa13.36□□□□□ -0.27
VPS13D-210ENST00000489961 AACSQ86V21 672 aa13.36□□□□□ -0.27
VPS13D-210ENST00000489961 AGBL3Q8NEM8 1001 aa13.36□□□□□ -0.27
VPS13D-210ENST00000489961 EAF2Q96CJ1 260 aaPredicted RBP13.36□□□□□ -0.27
VPS13D-210ENST00000489961 GCC1Q96CN9 775 aa13.36□□□□□ -0.27
VPS13D-210ENST00000489961 RRAGCQ9HB90 399 aa13.36□□□□□ -0.27
VPS13D-210ENST00000489961 NMRK2Q9NPI5 230 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms